RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
MMP11-213ENST00000493132 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
MMP11-213ENST00000493132 EHBP1L1Q8N3D4 1523 aa22.29■■□□□ 1.16
MMP11-213ENST00000493132 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
MMP11-213ENST00000493132 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
MMP11-213ENST00000493132 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
MMP11-213ENST00000493132 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
MMP11-213ENST00000493132 POGZQ7Z3K3 1410 aa22.23■■□□□ 1.15
MMP11-213ENST00000493132 ZMYM4Q5VZL5 1548 aa22.22■■□□□ 1.15
MMP11-213ENST00000493132 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.15
MMP11-213ENST00000493132 KDM4FA0A1W2PPD8 638 aa22.2■■□□□ 1.14
MMP11-213ENST00000493132 ABCC1P33527 1531 aa22.2■■□□□ 1.14
MMP11-213ENST00000493132 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
MMP11-213ENST00000493132 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
MMP11-213ENST00000493132 CCNB3Q8WWL7 1395 aa22.17■■□□□ 1.14
MMP11-213ENST00000493132 SAMD9LQ8IVG5 1584 aa22.16■■□□□ 1.14
MMP11-213ENST00000493132 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
MMP11-213ENST00000493132 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
MMP11-213ENST00000493132 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.14
MMP11-213ENST00000493132 ZNF777Q9ULD5 760 aaPredicted RBP22.14■■□□□ 1.13
MMP11-213ENST00000493132 KDM5CP41229 1560 aa22.12■■□□□ 1.13
MMP11-213ENST00000493132 HECW2Q9P2P5 1572 aa22.12■■□□□ 1.13
MMP11-213ENST00000493132 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
MMP11-213ENST00000493132 NCOA2Q15596 1464 aa22.11■■□□□ 1.13
MMP11-213ENST00000493132 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
MMP11-213ENST00000493132 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
MMP11-213ENST00000493132 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
MMP11-213ENST00000493132 MAGI2Q86UL8 1455 aa22.1■■□□□ 1.13
MMP11-213ENST00000493132 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
MMP11-213ENST00000493132 SIGLEC1Q9BZZ2 1709 aa22.09■■□□□ 1.13
MMP11-213ENST00000493132 TRAPPC8Q9Y2L5 1435 aa22.08■■□□□ 1.13
MMP11-213ENST00000493132 CFDP1Q9UEE9 299 aaPredicted RBP22.08■■□□□ 1.13
MMP11-213ENST00000493132 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.12
MMP11-213ENST00000493132 AFAP1Q8N556 730 aa22.07■■□□□ 1.12
MMP11-213ENST00000493132 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
MMP11-213ENST00000493132 ABCA6Q8N139 1617 aa22.06■■□□□ 1.12
MMP11-213ENST00000493132 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
MMP11-213ENST00000493132 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
MMP11-213ENST00000493132 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
MMP11-213ENST00000493132 MADDQ8WXG6 1647 aa22.03■■□□□ 1.12
MMP11-213ENST00000493132 APLP2Q06481 763 aa22.03■■□□□ 1.12
MMP11-213ENST00000493132 C9orf84Q5VXU9 1444 aa22.02■■□□□ 1.12
MMP11-213ENST00000493132 KIDINS220Q9ULH0 1771 aa22.01■■□□□ 1.11
MMP11-213ENST00000493132 ATP10AO60312 1499 aa22.01■■□□□ 1.11
MMP11-213ENST00000493132 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
MMP11-213ENST00000493132 RIMS1Q86UR5 1692 aaKnown RBP21.99■■□□□ 1.11
MMP11-213ENST00000493132 HNRNPMP52272 730 aaKnown RBP eCLIP21.99■■□□□ 1.11
MMP11-213ENST00000493132 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
MMP11-213ENST00000493132 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
MMP11-213ENST00000493132 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
MMP11-213ENST00000493132 KIAA1107Q9UPP5 1409 aa21.97■■□□□ 1.11
MMP11-213ENST00000493132 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
MMP11-213ENST00000493132 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
MMP11-213ENST00000493132 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
MMP11-213ENST00000493132 MLECQ14165 292 aa21.95■■□□□ 1.1
MMP11-213ENST00000493132 SPAG9O60271 1321 aaKnown RBP21.94■■□□□ 1.1
MMP11-213ENST00000493132 REREQ9P2R6 1566 aa21.92■■□□□ 1.1
MMP11-213ENST00000493132 PTPRMP28827 1452 aa21.9■■□□□ 1.1
MMP11-213ENST00000493132 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
MMP11-213ENST00000493132 MBD5Q9P267 1494 aa21.9■■□□□ 1.1
MMP11-213ENST00000493132 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.09
MMP11-213ENST00000493132 ADGBQ8N7X0 1667 aa21.87■■□□□ 1.09
MMP11-213ENST00000493132 ARHGEF5Q12774 1597 aa21.86■■□□□ 1.09
MMP11-213ENST00000493132 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
MMP11-213ENST00000493132 AGLP35573 1532 aa21.83■■□□□ 1.09
MMP11-213ENST00000493132 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.08
MMP11-213ENST00000493132 MIA2Q96PC5 1412 aa21.82■■□□□ 1.08
MMP11-213ENST00000493132 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
MMP11-213ENST00000493132 A2MP01023 1474 aa21.81■■□□□ 1.08
MMP11-213ENST00000493132 CROCC2H7BZ55 1655 aa21.78■■□□□ 1.08
MMP11-213ENST00000493132 RTEL1-TNFRSF6BF6WH68 1400 aa21.77■■□□□ 1.08
MMP11-213ENST00000493132 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
MMP11-213ENST00000493132 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
MMP11-213ENST00000493132 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
MMP11-213ENST00000493132 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
MMP11-213ENST00000493132 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
MMP11-213ENST00000493132 ESF1Q9H501 851 aaKnown RBP21.72■■□□□ 1.07
MMP11-213ENST00000493132 C3P01024 1663 aa21.72■■□□□ 1.07
MMP11-213ENST00000493132 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
MMP11-213ENST00000493132 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
MMP11-213ENST00000493132 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.06
MMP11-213ENST00000493132 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
MMP11-213ENST00000493132 MROH2AA6NES4 1674 aa21.67■■□□□ 1.06
MMP11-213ENST00000493132 SHANK2Q9UPX8 1470 aa21.66■■□□□ 1.06
MMP11-213ENST00000493132 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
MMP11-213ENST00000493132 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
MMP11-213ENST00000493132 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
MMP11-213ENST00000493132 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
MMP11-213ENST00000493132 ABCC5O15440 1437 aa21.65■■□□□ 1.06
MMP11-213ENST00000493132 DAPK1P53355 1430 aa21.65■■□□□ 1.06
MMP11-213ENST00000493132 GGT6Q6P531 493 aa21.65■■□□□ 1.06
MMP11-213ENST00000493132 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
MMP11-213ENST00000493132 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.05
MMP11-213ENST00000493132 KIF3BO15066 747 aa21.61■■□□□ 1.05
MMP11-213ENST00000493132 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
MMP11-213ENST00000493132 DUOX2Q9NRD8 1548 aa21.59■■□□□ 1.05
MMP11-213ENST00000493132 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
MMP11-213ENST00000493132 RNF17Q9BXT8 1623 aaKnown RBP21.58■■□□□ 1.05
MMP11-213ENST00000493132 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
MMP11-213ENST00000493132 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms