RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 STK24Q9Y6E0 443 aa16.87■□□□□ 0.29
COL12A1-209ENST00000493109 NLRP6P59044 892 aa16.86■□□□□ 0.29
COL12A1-209ENST00000493109 PKD2Q13563 968 aa16.86■□□□□ 0.29
COL12A1-209ENST00000493109 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
COL12A1-209ENST00000493109 ERBB3P21860 1342 aa16.83■□□□□ 0.28
COL12A1-209ENST00000493109 GPR153Q6NV75 609 aa16.83■□□□□ 0.28
COL12A1-209ENST00000493109 RGL2O15211 777 aa16.82■□□□□ 0.28
COL12A1-209ENST00000493109 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
COL12A1-209ENST00000493109 STK25O00506 426 aa16.8■□□□□ 0.28
COL12A1-209ENST00000493109 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
COL12A1-209ENST00000493109 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
COL12A1-209ENST00000493109 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
COL12A1-209ENST00000493109 KIF3CO14782 793 aa16.72■□□□□ 0.27
COL12A1-209ENST00000493109 ARSIQ5FYB1 569 aa16.71■□□□□ 0.27
COL12A1-209ENST00000493109 KHSRPQ92945 711 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL12A1-209ENST00000493109 C2orf72A6NCS6 295 aa16.67■□□□□ 0.26
COL12A1-209ENST00000493109 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
COL12A1-209ENST00000493109 PPP1R37O75864 691 aa16.61■□□□□ 0.25
COL12A1-209ENST00000493109 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
COL12A1-209ENST00000493109 NUDT7P0C024 238 aa16.5■□□□□ 0.23
COL12A1-209ENST00000493109 RNF166Q96A37 237 aaPredicted RBP16.5■□□□□ 0.23
COL12A1-209ENST00000493109 SLC34A2O95436 690 aa16.47■□□□□ 0.23
COL12A1-209ENST00000493109 PCDHGA4Q9Y5G9 962 aa16.47■□□□□ 0.23
COL12A1-209ENST00000493109 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
COL12A1-209ENST00000493109 POTEEQ6S8J3 1075 aa16.44■□□□□ 0.22
COL12A1-209ENST00000493109 TMC2Q8TDI7 906 aa16.44■□□□□ 0.22
COL12A1-209ENST00000493109 LHX6Q9UPM6 363 aa16.43■□□□□ 0.22
COL12A1-209ENST00000493109 HS6ST3Q8IZP7 471 aa16.41■□□□□ 0.22
COL12A1-209ENST00000493109 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL12A1-209ENST00000493109 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
COL12A1-209ENST00000493109 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
COL12A1-209ENST00000493109 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
COL12A1-209ENST00000493109 PTGER2P43116 358 aa16.31■□□□□ 0.2
COL12A1-209ENST00000493109 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
COL12A1-209ENST00000493109 PBX2P40425 430 aa16.29■□□□□ 0.2
COL12A1-209ENST00000493109 FOXK1P85037 733 aa16.29■□□□□ 0.2
COL12A1-209ENST00000493109 PTCD2Q8WV60 388 aaKnown RBP16.28■□□□□ 0.2
COL12A1-209ENST00000493109 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
COL12A1-209ENST00000493109 PLPP6Q8IY26 295 aa16.26■□□□□ 0.19
COL12A1-209ENST00000493109 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
COL12A1-209ENST00000493109 DSG2Q14126 1118 aa16.25■□□□□ 0.19
COL12A1-209ENST00000493109 DNAJC5Q9H3Z4 198 aa16.22■□□□□ 0.19
COL12A1-209ENST00000493109 ARHGAP33O14559 1287 aa16.14■□□□□ 0.17
COL12A1-209ENST00000493109 DMRTA1Q5VZB9 504 aa16.13■□□□□ 0.17
COL12A1-209ENST00000493109 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
COL12A1-209ENST00000493109 ADGRD1Q6QNK2 874 aa16.12■□□□□ 0.17
COL12A1-209ENST00000493109 PSEN2P49810 448 aa16.11■□□□□ 0.17
COL12A1-209ENST00000493109 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
COL12A1-209ENST00000493109 OXER1Q8TDS5 423 aa16.07■□□□□ 0.16
COL12A1-209ENST00000493109 HRO43593 1189 aa16.05■□□□□ 0.16
COL12A1-209ENST00000493109 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
COL12A1-209ENST00000493109 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
COL12A1-209ENST00000493109 UPF1Q92900 1129 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL12A1-209ENST00000493109 TK2O00142 265 aa16.01■□□□□ 0.15
COL12A1-209ENST00000493109 TBC1D12O60347 775 aa16.01■□□□□ 0.15
COL12A1-209ENST00000493109 PPP1R15BQ5SWA1 713 aa15.99■□□□□ 0.15
COL12A1-209ENST00000493109 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
COL12A1-209ENST00000493109 KCNK17Q96T54 332 aa15.95■□□□□ 0.14
COL12A1-209ENST00000493109 RYDENQ9NUL5 291 aaKnown RBP15.95■□□□□ 0.14
COL12A1-209ENST00000493109 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
COL12A1-209ENST00000493109 ZNF454Q8N9F8 522 aa15.9■□□□□ 0.14
COL12A1-209ENST00000493109 PDE4AP27815 886 aa15.87■□□□□ 0.13
COL12A1-209ENST00000493109 FOSBP53539 338 aa15.87■□□□□ 0.13
COL12A1-209ENST00000493109 PLA2G2EQ9NZK7 142 aa15.87■□□□□ 0.13
COL12A1-209ENST00000493109 VPS9D1Q9Y2B5 631 aa15.87■□□□□ 0.13
COL12A1-209ENST00000493109 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
COL12A1-209ENST00000493109 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
COL12A1-209ENST00000493109 KCTD12Q96CX2 325 aaKnown RBP15.84■□□□□ 0.13
COL12A1-209ENST00000493109 LARP6Q9BRS8 491 aaKnown RBP15.82■□□□□ 0.12
COL12A1-209ENST00000493109 MFSD10Q14728 455 aa15.81■□□□□ 0.12
COL12A1-209ENST00000493109 EVI5O60447 810 aa15.8■□□□□ 0.12
COL12A1-209ENST00000493109 DDX27Q96GQ7 796 aaKnown RBP15.79■□□□□ 0.12
COL12A1-209ENST00000493109 CADPS2Q86UW7 1296 aa15.78■□□□□ 0.12
COL12A1-209ENST00000493109 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
COL12A1-209ENST00000493109 EMILIN3Q9NT22 766 aa15.78■□□□□ 0.12
COL12A1-209ENST00000493109 SLC4A5Q9BY07 1137 aa15.77■□□□□ 0.12
COL12A1-209ENST00000493109 BHMG1C9JSJ3 638 aaPredicted RBP15.76■□□□□ 0.11
COL12A1-209ENST00000493109 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
COL12A1-209ENST00000493109 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
COL12A1-209ENST00000493109 ADAM33Q9BZ11 813 aa15.76■□□□□ 0.11
COL12A1-209ENST00000493109 PTPREP23469 700 aa15.73■□□□□ 0.11
COL12A1-209ENST00000493109 ZDHHC16Q969W1 377 aa15.71■□□□□ 0.11
COL12A1-209ENST00000493109 STAC3Q96MF2 364 aa15.7■□□□□ 0.1
COL12A1-209ENST00000493109 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
COL12A1-209ENST00000493109 MAP3K9P80192 1104 aa15.67■□□□□ 0.1
COL12A1-209ENST00000493109 PTPN5P54829 565 aa15.66■□□□□ 0.1
COL12A1-209ENST00000493109 PCDHGA10Q9Y5H3 936 aa15.66■□□□□ 0.1
COL12A1-209ENST00000493109 THSD4Q6ZMP0 1018 aa15.64■□□□□ 0.09
COL12A1-209ENST00000493109 COL9A1P20849 921 aa15.59■□□□□ 0.09
COL12A1-209ENST00000493109 PROX2Q3B8N5 592 aa15.57■□□□□ 0.08
COL12A1-209ENST00000493109 MRPL50Q8N5N7 158 aaKnown RBP15.57■□□□□ 0.08
COL12A1-209ENST00000493109 PPP1R3GB7ZBB8 358 aa15.56■□□□□ 0.08
COL12A1-209ENST00000493109 CAMK2BQ13554 666 aa15.56■□□□□ 0.08
COL12A1-209ENST00000493109 WNT2BQ93097 391 aa15.56■□□□□ 0.08
COL12A1-209ENST00000493109 PHF14O94880 888 aa15.52■□□□□ 0.08
COL12A1-209ENST00000493109 TYW1BQ6NUM6 668 aa15.51■□□□□ 0.07
COL12A1-209ENST00000493109 NBPF3Q9H094 633 aa15.51■□□□□ 0.07
COL12A1-209ENST00000493109 GOLGA8CPA6NN73 597 aa15.49■□□□□ 0.07
COL12A1-209ENST00000493109 DPYSL4O14531 572 aa15.49■□□□□ 0.07
COL12A1-209ENST00000493109 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms