RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
TRIM11-204ENST00000493030 APBB1O00213 710 aa17.42■□□□□ 0.38
TRIM11-204ENST00000493030 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
TRIM11-204ENST00000493030 SOGA1O94964 1423 aa17.41■□□□□ 0.38
TRIM11-204ENST00000493030 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
TRIM11-204ENST00000493030 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
TRIM11-204ENST00000493030 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
TRIM11-204ENST00000493030 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
TRIM11-204ENST00000493030 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
TRIM11-204ENST00000493030 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
TRIM11-204ENST00000493030 ISY1Q9ULR0 285 aaKnown RBP17.38■□□□□ 0.37
TRIM11-204ENST00000493030 NAP1L5Q96NT1 182 aaPredicted RBP17.38■□□□□ 0.37
TRIM11-204ENST00000493030 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
TRIM11-204ENST00000493030 ZNF330Q9Y3S2 320 aaPredicted RBP17.37■□□□□ 0.37
TRIM11-204ENST00000493030 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
TRIM11-204ENST00000493030 MCCP23508 829 aa17.36■□□□□ 0.37
TRIM11-204ENST00000493030 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
TRIM11-204ENST00000493030 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
TRIM11-204ENST00000493030 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRIM11-204ENST00000493030 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
TRIM11-204ENST00000493030 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
TRIM11-204ENST00000493030 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
TRIM11-204ENST00000493030 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.37
TRIM11-204ENST00000493030 NRDCO43847 1150 aa17.32■□□□□ 0.36
TRIM11-204ENST00000493030 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
TRIM11-204ENST00000493030 CLSTN1O94985 981 aa17.32■□□□□ 0.36
TRIM11-204ENST00000493030 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
TRIM11-204ENST00000493030 NUP155O75694 1391 aa17.3■□□□□ 0.36
TRIM11-204ENST00000493030 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
TRIM11-204ENST00000493030 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
TRIM11-204ENST00000493030 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
TRIM11-204ENST00000493030 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
TRIM11-204ENST00000493030 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
TRIM11-204ENST00000493030 EFCAB2Q5VUJ9 269 aa17.28■□□□□ 0.36
TRIM11-204ENST00000493030 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
TRIM11-204ENST00000493030 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
TRIM11-204ENST00000493030 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.35
TRIM11-204ENST00000493030 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
TRIM11-204ENST00000493030 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
TRIM11-204ENST00000493030 NUTM2DQ5VT03 806 aaPredicted RBP17.26■□□□□ 0.35
TRIM11-204ENST00000493030 KIF3BO15066 747 aa17.26■□□□□ 0.35
TRIM11-204ENST00000493030 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
TRIM11-204ENST00000493030 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
TRIM11-204ENST00000493030 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
TRIM11-204ENST00000493030 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
TRIM11-204ENST00000493030 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
TRIM11-204ENST00000493030 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
TRIM11-204ENST00000493030 WIZO95785 1651 aa17.22■□□□□ 0.35
TRIM11-204ENST00000493030 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
TRIM11-204ENST00000493030 HNRNPMP52272 730 aaKnown RBP eCLIP17.21■□□□□ 0.354e-8■■■■□ 21.3
TRIM11-204ENST00000493030 RALBP1Q15311 655 aa17.21■□□□□ 0.35
TRIM11-204ENST00000493030 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
TRIM11-204ENST00000493030 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.34
TRIM11-204ENST00000493030 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
TRIM11-204ENST00000493030 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
TRIM11-204ENST00000493030 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
TRIM11-204ENST00000493030 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
TRIM11-204ENST00000493030 SMARCA4P51532 1647 aa17.19■□□□□ 0.34
TRIM11-204ENST00000493030 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
TRIM11-204ENST00000493030 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
TRIM11-204ENST00000493030 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
TRIM11-204ENST00000493030 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
TRIM11-204ENST00000493030 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
TRIM11-204ENST00000493030 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
TRIM11-204ENST00000493030 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
TRIM11-204ENST00000493030 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
TRIM11-204ENST00000493030 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
TRIM11-204ENST00000493030 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
TRIM11-204ENST00000493030 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
TRIM11-204ENST00000493030 SLKQ9H2G2 1235 aaPredicted RBP17.16■□□□□ 0.34
TRIM11-204ENST00000493030 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
TRIM11-204ENST00000493030 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
TRIM11-204ENST00000493030 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
TRIM11-204ENST00000493030 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
TRIM11-204ENST00000493030 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
TRIM11-204ENST00000493030 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
TRIM11-204ENST00000493030 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
TRIM11-204ENST00000493030 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
TRIM11-204ENST00000493030 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
TRIM11-204ENST00000493030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRIM11-204ENST00000493030 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
TRIM11-204ENST00000493030 L3MBTL2Q969R5 705 aa17.13■□□□□ 0.33
TRIM11-204ENST00000493030 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
TRIM11-204ENST00000493030 GZF1Q9H116 711 aaPredicted RBP17.13■□□□□ 0.33
TRIM11-204ENST00000493030 MFAP1P55081 439 aaKnown RBP17.12■□□□□ 0.33
TRIM11-204ENST00000493030 AMPHP49418 695 aa17.12■□□□□ 0.33
TRIM11-204ENST00000493030 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
TRIM11-204ENST00000493030 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
TRIM11-204ENST00000493030 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
TRIM11-204ENST00000493030 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
TRIM11-204ENST00000493030 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
TRIM11-204ENST00000493030 HMMRO75330 724 aa17.08■□□□□ 0.33
TRIM11-204ENST00000493030 DEKP35659 375 aaKnown RBP17.08■□□□□ 0.33
TRIM11-204ENST00000493030 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
TRIM11-204ENST00000493030 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
TRIM11-204ENST00000493030 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
TRIM11-204ENST00000493030 TCERG1O14776 1098 aaKnown RBP17.06■□□□□ 0.32
TRIM11-204ENST00000493030 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
TRIM11-204ENST00000493030 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
TRIM11-204ENST00000493030 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms