RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
PKP4-214ENST00000492496 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
PKP4-214ENST00000492496 KDM4FA0A1W2PPD8 638 aa25.42■■□□□ 1.66
PKP4-214ENST00000492496 MTUS2Q5JR59 1369 aa25.41■■□□□ 1.66
PKP4-214ENST00000492496 SCAPERQ9BY12 1400 aa25.4■■□□□ 1.66
PKP4-214ENST00000492496 ZMYM4Q5VZL5 1548 aa25.4■■□□□ 1.66
PKP4-214ENST00000492496 EHBP1L1Q8N3D4 1523 aa25.38■■□□□ 1.65
PKP4-214ENST00000492496 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
PKP4-214ENST00000492496 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
PKP4-214ENST00000492496 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
PKP4-214ENST00000492496 TIAM1Q13009 1591 aa25.34■■□□□ 1.65
PKP4-214ENST00000492496 GPATCH8Q9UKJ3 1502 aaKnown RBP25.32■■□□□ 1.64
PKP4-214ENST00000492496 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
PKP4-214ENST00000492496 ABCC1P33527 1531 aa25.31■■□□□ 1.64
PKP4-214ENST00000492496 ZFYVE16Q7Z3T8 1539 aa25.3■■□□□ 1.64
PKP4-214ENST00000492496 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
PKP4-214ENST00000492496 CCNB3Q8WWL7 1395 aa25.29■■□□□ 1.64
PKP4-214ENST00000492496 KDM5CP41229 1560 aa25.28■■□□□ 1.64
PKP4-214ENST00000492496 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
PKP4-214ENST00000492496 SUPT6HQ7KZ85 1726 aaKnown RBP25.27■■□□□ 1.64
PKP4-214ENST00000492496 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
PKP4-214ENST00000492496 YEATS2Q9ULM3 1422 aa25.24■■□□□ 1.63
PKP4-214ENST00000492496 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
PKP4-214ENST00000492496 ARHGEF12Q9NZN5 1544 aa25.22■■□□□ 1.63
PKP4-214ENST00000492496 CFDP1Q9UEE9 299 aaPredicted RBP25.22■■□□□ 1.63
PKP4-214ENST00000492496 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
PKP4-214ENST00000492496 BCORL1Q5H9F3 1711 aa25.21■■□□□ 1.63
PKP4-214ENST00000492496 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
PKP4-214ENST00000492496 PLEKHH2Q8IVE3 1493 aa25.21■■□□□ 1.63
PKP4-214ENST00000492496 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
PKP4-214ENST00000492496 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
PKP4-214ENST00000492496 ZNF777Q9ULD5 760 aaPredicted RBP25.19■■□□□ 1.62
PKP4-214ENST00000492496 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
PKP4-214ENST00000492496 MLH3Q9UHC1 1453 aa25.18■■□□□ 1.62
PKP4-214ENST00000492496 SYCP2Q9BX26 1530 aa25.17■■□□□ 1.62
PKP4-214ENST00000492496 ATP10AO60312 1499 aa25.17■■□□□ 1.62
PKP4-214ENST00000492496 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
PKP4-214ENST00000492496 ARID4BQ4LE39 1312 aaPredicted RBP25.16■■□□□ 1.62
PKP4-214ENST00000492496 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
PKP4-214ENST00000492496 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.62
PKP4-214ENST00000492496 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
PKP4-214ENST00000492496 KIDINS220Q9ULH0 1771 aa25.12■■□□□ 1.61
PKP4-214ENST00000492496 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
PKP4-214ENST00000492496 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
PKP4-214ENST00000492496 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
PKP4-214ENST00000492496 HNRNPMP52272 730 aaKnown RBP eCLIP25.1■■□□□ 1.61
PKP4-214ENST00000492496 APLP2Q06481 763 aa25.1■■□□□ 1.61
PKP4-214ENST00000492496 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
PKP4-214ENST00000492496 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
PKP4-214ENST00000492496 ZNF644Q9H582 1327 aaPredicted RBP25.05■■□□□ 1.6
PKP4-214ENST00000492496 MBD5Q9P267 1494 aa25.04■■□□□ 1.6
PKP4-214ENST00000492496 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
PKP4-214ENST00000492496 SPAG9O60271 1321 aaKnown RBP25.04■■□□□ 1.6
PKP4-214ENST00000492496 PTPRMP28827 1452 aa25.03■■□□□ 1.6
PKP4-214ENST00000492496 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
PKP4-214ENST00000492496 ATP7AQ04656 1500 aa25.03■■□□□ 1.6
PKP4-214ENST00000492496 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
PKP4-214ENST00000492496 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
PKP4-214ENST00000492496 AGLP35573 1532 aa25.01■■□□□ 1.59
PKP4-214ENST00000492496 MYOM3Q5VTT5 1437 aa24.98■■□□□ 1.59
PKP4-214ENST00000492496 MIA2Q96PC5 1412 aa24.98■■□□□ 1.59
PKP4-214ENST00000492496 RSPH4AQ5TD94 716 aa24.98■■□□□ 1.59
PKP4-214ENST00000492496 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
PKP4-214ENST00000492496 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
PKP4-214ENST00000492496 MLECQ14165 292 aa24.96■■□□□ 1.59
PKP4-214ENST00000492496 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.59
PKP4-214ENST00000492496 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
PKP4-214ENST00000492496 PLXNC1O60486 1568 aa24.91■■□□□ 1.58
PKP4-214ENST00000492496 A2MP01023 1474 aa24.9■■□□□ 1.58
PKP4-214ENST00000492496 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
PKP4-214ENST00000492496 PTPN23Q9H3S7 1636 aa24.85■■□□□ 1.57
PKP4-214ENST00000492496 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
PKP4-214ENST00000492496 TSPY4P0CV99 314 aa24.84■■□□□ 1.57
PKP4-214ENST00000492496 TSPY10P0CW01 314 aa24.84■■□□□ 1.57
PKP4-214ENST00000492496 FGD6Q6ZV73 1430 aa24.81■■□□□ 1.56
PKP4-214ENST00000492496 DHX29Q7Z478 1369 aaKnown RBP24.8■■□□□ 1.56
PKP4-214ENST00000492496 TCOF1Q13428 1488 aaKnown RBP24.8■■□□□ 1.56
PKP4-214ENST00000492496 CNTLNQ9NXG0 1405 aa24.79■■□□□ 1.56
PKP4-214ENST00000492496 ESF1Q9H501 851 aaKnown RBP24.78■■□□□ 1.56
PKP4-214ENST00000492496 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
PKP4-214ENST00000492496 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
PKP4-214ENST00000492496 C3P01024 1663 aa24.77■■□□□ 1.56
PKP4-214ENST00000492496 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
PKP4-214ENST00000492496 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
PKP4-214ENST00000492496 SETD1BQ9UPS6 1966 aaKnown RBP24.74■■□□□ 1.55
PKP4-214ENST00000492496 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
PKP4-214ENST00000492496 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
PKP4-214ENST00000492496 PPP6R1Q9UPN7 881 aa24.72■■□□□ 1.55
PKP4-214ENST00000492496 CLTCQ00610 1675 aaKnown RBP24.72■■□□□ 1.55
PKP4-214ENST00000492496 ABCC5O15440 1437 aa24.71■■□□□ 1.55
PKP4-214ENST00000492496 PREX1Q8TCU6 1659 aa24.71■■□□□ 1.55
PKP4-214ENST00000492496 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
PKP4-214ENST00000492496 GGT6Q6P531 493 aa24.7■■□□□ 1.54
PKP4-214ENST00000492496 DAPK1P53355 1430 aa24.69■■□□□ 1.54
PKP4-214ENST00000492496 KIF3BO15066 747 aa24.67■■□□□ 1.54
PKP4-214ENST00000492496 EIF2AK4Q9P2K8 1649 aaKnown RBP24.67■■□□□ 1.54
PKP4-214ENST00000492496 FAM135AQ9P2D6 1515 aa24.66■■□□□ 1.54
PKP4-214ENST00000492496 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
PKP4-214ENST00000492496 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
PKP4-214ENST00000492496 RNF17Q9BXT8 1623 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms