RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 GNL2Q13823 731 aaKnown RBP8.7□□□□□ -1.02
UBP1-212ENST00000492136 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
UBP1-212ENST00000492136 FRAT2O75474 233 aaPredicted RBP8.69□□□□□ -1.02
UBP1-212ENST00000492136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
UBP1-212ENST00000492136 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
UBP1-212ENST00000492136 CCAR1Q8IX12 1150 aaKnown RBP8.69□□□□□ -1.02
UBP1-212ENST00000492136 HSCBQ8IWL3 235 aa8.69□□□□□ -1.02
UBP1-212ENST00000492136 DEKP35659 375 aaKnown RBP8.68□□□□□ -1.02
UBP1-212ENST00000492136 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
UBP1-212ENST00000492136 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
UBP1-212ENST00000492136 ABCC9O60706 1549 aa8.68□□□□□ -1.02
UBP1-212ENST00000492136 RGL3Q3MIN7 710 aa8.67□□□□□ -1.02
UBP1-212ENST00000492136 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
UBP1-212ENST00000492136 SF3B2Q13435 895 aaKnown RBP8.67□□□□□ -1.02
UBP1-212ENST00000492136 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
UBP1-212ENST00000492136 CFAP53Q96M91 514 aa8.66□□□□□ -1.02
UBP1-212ENST00000492136 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
UBP1-212ENST00000492136 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
UBP1-212ENST00000492136 EIF4G2P78344 907 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBP1-212ENST00000492136 MAPK8IP3Q9UPT6 1336 aa8.65□□□□□ -1.03
UBP1-212ENST00000492136 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
UBP1-212ENST00000492136 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
UBP1-212ENST00000492136 MARCH6O60337 910 aa8.64□□□□□ -1.03
UBP1-212ENST00000492136 CC2D1BQ5T0F9 858 aaKnown RBP8.64□□□□□ -1.03
UBP1-212ENST00000492136 RRP7BPQ9NSQ0 103 aa8.64□□□□□ -1.03
UBP1-212ENST00000492136 PODXL2Q9NZ53 605 aa8.64□□□□□ -1.03
UBP1-212ENST00000492136 KNSTRNQ9Y448 316 aa8.64□□□□□ -1.03
UBP1-212ENST00000492136 GOLGA6L1Q8N7Z2 621 aa8.63□□□□□ -1.03
UBP1-212ENST00000492136 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBP1-212ENST00000492136 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
UBP1-212ENST00000492136 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
UBP1-212ENST00000492136 MCCP23508 829 aa8.63□□□□□ -1.03
UBP1-212ENST00000492136 CA8P35219 290 aa8.62□□□□□ -1.03
UBP1-212ENST00000492136 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
UBP1-212ENST00000492136 CSRNP3Q8WYN3 585 aa8.62□□□□□ -1.03
UBP1-212ENST00000492136 BBXQ8WY36 941 aaPredicted RBP8.62□□□□□ -1.03
UBP1-212ENST00000492136 APBB1O00213 710 aa8.62□□□□□ -1.03
UBP1-212ENST00000492136 U2SURPO15042 1029 aaKnown RBP8.62□□□□□ -1.03
UBP1-212ENST00000492136 KCNA4P22459 653 aa8.62□□□□□ -1.03
UBP1-212ENST00000492136 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
UBP1-212ENST00000492136 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
UBP1-212ENST00000492136 TSPY4P0CV99 314 aa8.61□□□□□ -1.03
UBP1-212ENST00000492136 TSPY10P0CW01 314 aa8.61□□□□□ -1.03
UBP1-212ENST00000492136 EVA1CP58658 441 aa8.61□□□□□ -1.03
UBP1-212ENST00000492136 TAF7LQ5H9L4 462 aa8.61□□□□□ -1.03
UBP1-212ENST00000492136 SCRIBQ14160 1630 aa8.6□□□□□ -1.03
UBP1-212ENST00000492136 PIP4K2BP78356 416 aa8.6□□□□□ -1.03
UBP1-212ENST00000492136 RASSF8Q8NHQ8 419 aa8.6□□□□□ -1.03
UBP1-212ENST00000492136 POGKQ9P215 609 aa8.59□□□□□ -1.03
UBP1-212ENST00000492136 TMEM132AQ24JP5 1023 aa8.58□□□□□ -1.04
UBP1-212ENST00000492136 SETQ01105 290 aaPredicted RBP8.57□□□□□ -1.04
UBP1-212ENST00000492136 MTUS2Q5JR59 1369 aa8.57□□□□□ -1.04
UBP1-212ENST00000492136 TOMM22Q9NS69 142 aa8.57□□□□□ -1.04
UBP1-212ENST00000492136 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
UBP1-212ENST00000492136 TMEM87AQ8NBN3 555 aa8.57□□□□□ -1.04
UBP1-212ENST00000492136 TPM4P67936 248 aa8.56□□□□□ -1.04
UBP1-212ENST00000492136 PTMSP20962 102 aa8.56□□□□□ -1.04
UBP1-212ENST00000492136 CALRP27797 417 aaKnown RBP8.56□□□□□ -1.04
UBP1-212ENST00000492136 CBX1P83916 185 aa8.56□□□□□ -1.04
UBP1-212ENST00000492136 KIAA1211Q6ZU35 1233 aa8.56□□□□□ -1.04
UBP1-212ENST00000492136 GORABQ5T7V8 394 aa8.55□□□□□ -1.04
UBP1-212ENST00000492136 NUDCQ9Y266 331 aa8.55□□□□□ -1.04
UBP1-212ENST00000492136 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
UBP1-212ENST00000492136 CHMP7Q8WUX9 453 aaPredicted RBP8.55□□□□□ -1.04
UBP1-212ENST00000492136 TTC16Q8NEE8 873 aa8.55□□□□□ -1.04
UBP1-212ENST00000492136 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
UBP1-212ENST00000492136 SLKQ9H2G2 1235 aaPredicted RBP8.54□□□□□ -1.04
UBP1-212ENST00000492136 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
UBP1-212ENST00000492136 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 PES1O00541 588 aaKnown RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 WDR78Q5VTH9 848 aa8.53□□□□□ -1.04
UBP1-212ENST00000492136 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 FOXD1Q16676 465 aa8.53□□□□□ -1.04
UBP1-212ENST00000492136 GBP4Q96PP9 640 aa8.53□□□□□ -1.04
UBP1-212ENST00000492136 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
UBP1-212ENST00000492136 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.04
UBP1-212ENST00000492136 NOL8Q76FK4 1167 aaKnown RBP8.52□□□□□ -1.04
UBP1-212ENST00000492136 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.04
UBP1-212ENST00000492136 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
UBP1-212ENST00000492136 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
UBP1-212ENST00000492136 MTMR7Q9Y216 660 aa8.52□□□□□ -1.05
UBP1-212ENST00000492136 STK26Q9P289 416 aa8.52□□□□□ -1.05
UBP1-212ENST00000492136 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
UBP1-212ENST00000492136 MS4A1P11836 297 aa8.51□□□□□ -1.05
UBP1-212ENST00000492136 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
UBP1-212ENST00000492136 CCAR2Q8N163 923 aaKnown RBP8.51□□□□□ -1.05
UBP1-212ENST00000492136 SYAP1Q96A49 352 aaPredicted RBP8.5□□□□□ -1.05
UBP1-212ENST00000492136 CCDC180Q9P1Z9 1646 aa8.5□□□□□ -1.05
UBP1-212ENST00000492136 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
UBP1-212ENST00000492136 RTF1Q92541 710 aaKnown RBP8.5□□□□□ -1.05
UBP1-212ENST00000492136 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
UBP1-212ENST00000492136 TPD52L1Q16890 204 aaPredicted RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 ZNF771Q7L3S4 317 aaPredicted RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
UBP1-212ENST00000492136 HTATSF1O43719 755 aaKnown RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 MFAP1P55081 439 aaKnown RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 C16orf71Q8IYS4 520 aaPredicted RBP8.48□□□□□ -1.05
UBP1-212ENST00000492136 TPM3P06753 285 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms