RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 GPATCH8Q9UKJ3 1502 aaKnown RBP36.17■■■■□ 3.38
SCN5A-213ENST00000491944 NEO1Q92859 1461 aa36.15■■■■□ 3.38
SCN5A-213ENST00000491944 ITSN2Q9NZM3 1697 aa36.15■■■■□ 3.38
SCN5A-213ENST00000491944 EFCAB2Q5VUJ9 269 aa36.12■■■■□ 3.37
SCN5A-213ENST00000491944 PPARGC1BQ86YN6 1023 aaKnown RBP36.11■■■■□ 3.37
SCN5A-213ENST00000491944 KDM6BO15054 1643 aa36.09■■■■□ 3.37
SCN5A-213ENST00000491944 AKNAQ7Z591 1439 aa36.08■■■■□ 3.37
SCN5A-213ENST00000491944 PHLDB1Q86UU1 1377 aa36.08■■■■□ 3.37
SCN5A-213ENST00000491944 CFDP1Q9UEE9 299 aaPredicted RBP36.06■■■■□ 3.36
SCN5A-213ENST00000491944 ZNF777Q9ULD5 760 aaPredicted RBP36.02■■■■□ 3.36
SCN5A-213ENST00000491944 ADGRL1O94910 1474 aa36.01■■■■□ 3.35
SCN5A-213ENST00000491944 MYOM3Q5VTT5 1437 aa36■■■■□ 3.35
SCN5A-213ENST00000491944 COL17A1Q9UMD9 1497 aaPredicted RBP35.99■■■■□ 3.35
SCN5A-213ENST00000491944 SAMD9LQ8IVG5 1584 aa35.97■■■■□ 3.35
SCN5A-213ENST00000491944 SCAPERQ9BY12 1400 aa35.94■■■■□ 3.34
SCN5A-213ENST00000491944 ABCC1P33527 1531 aa35.93■■■■□ 3.34
SCN5A-213ENST00000491944 DENND4BO75064 1496 aaPredicted RBP35.92■■■■□ 3.34
SCN5A-213ENST00000491944 ZNF644Q9H582 1327 aaPredicted RBP35.89■■■■□ 3.34
SCN5A-213ENST00000491944 MIA2Q96PC5 1412 aa35.88■■■■□ 3.33
SCN5A-213ENST00000491944 PLEKHH2Q8IVE3 1493 aa35.88■■■■□ 3.33
SCN5A-213ENST00000491944 RAPGEF3O95398 923 aa35.88■■■■□ 3.33
SCN5A-213ENST00000491944 SYCP2Q9BX26 1530 aa35.87■■■■□ 3.33
SCN5A-213ENST00000491944 CAMSAP2Q08AD1 1489 aa35.87■■■■□ 3.33
SCN5A-213ENST00000491944 RICTORQ6R327 1708 aa35.87■■■■□ 3.33
SCN5A-213ENST00000491944 FRMPD1Q5SYB0 1578 aa35.85■■■■□ 3.33
SCN5A-213ENST00000491944 FGD6Q6ZV73 1430 aa35.85■■■■□ 3.33
SCN5A-213ENST00000491944 ARHGEF12Q9NZN5 1544 aa35.85■■■■□ 3.33
SCN5A-213ENST00000491944 POGZQ7Z3K3 1410 aa35.84■■■■□ 3.33
SCN5A-213ENST00000491944 PTPN23Q9H3S7 1636 aa35.82■■■■□ 3.32
SCN5A-213ENST00000491944 KIAA1107Q9UPP5 1409 aa35.82■■■■□ 3.32
SCN5A-213ENST00000491944 HNRNPMP52272 730 aaKnown RBP eCLIP35.81■■■■□ 3.32
SCN5A-213ENST00000491944 ZNF518AQ6AHZ1 1483 aa35.79■■■■□ 3.32
SCN5A-213ENST00000491944 TRAPPC8Q9Y2L5 1435 aa35.78■■■■□ 3.32
SCN5A-213ENST00000491944 AFAP1Q8N556 730 aa35.76■■■■□ 3.31
SCN5A-213ENST00000491944 MBD5Q9P267 1494 aa35.72■■■■□ 3.31
SCN5A-213ENST00000491944 ZMYM4Q5VZL5 1548 aa35.72■■■■□ 3.31
SCN5A-213ENST00000491944 TCOF1Q13428 1488 aaKnown RBP35.71■■■■□ 3.31
SCN5A-213ENST00000491944 KDM5CP41229 1560 aa35.71■■■■□ 3.31
SCN5A-213ENST00000491944 FAM50AQ14320 339 aaKnown RBP35.67■■■■□ 3.3
SCN5A-213ENST00000491944 ARHGEF5Q12774 1597 aa35.67■■■■□ 3.3
SCN5A-213ENST00000491944 CCDC141Q6ZP82 1450 aa35.66■■■■□ 3.3
SCN5A-213ENST00000491944 MYT1LQ9UL68 1186 aa35.65■■■■□ 3.3
SCN5A-213ENST00000491944 HECW2Q9P2P5 1572 aa35.65■■■■□ 3.3
SCN5A-213ENST00000491944 RSPH4AQ5TD94 716 aa35.62■■■■□ 3.29
SCN5A-213ENST00000491944 MAGI2Q86UL8 1455 aa35.61■■■■□ 3.29
SCN5A-213ENST00000491944 ZFYVE16Q7Z3T8 1539 aa35.61■■■■□ 3.29
SCN5A-213ENST00000491944 SPAG9O60271 1321 aaKnown RBP35.6■■■■□ 3.29
SCN5A-213ENST00000491944 ARHGEF40Q8TER5 1519 aa35.58■■■■□ 3.29
SCN5A-213ENST00000491944 MLH3Q9UHC1 1453 aa35.58■■■■□ 3.29
SCN5A-213ENST00000491944 DNMT1P26358 1616 aaKnown RBP35.57■■■■□ 3.28
SCN5A-213ENST00000491944 YEATS2Q9ULM3 1422 aa35.57■■■■□ 3.28
SCN5A-213ENST00000491944 KIDINS220Q9ULH0 1771 aa35.56■■■■□ 3.28
SCN5A-213ENST00000491944 RRBP1Q9P2E9 1410 aaKnown RBP35.56■■■■□ 3.28
SCN5A-213ENST00000491944 ATP7AQ04656 1500 aa35.55■■■■□ 3.28
SCN5A-213ENST00000491944 INO80Q9ULG1 1556 aaPredicted RBP35.54■■■■□ 3.28
SCN5A-213ENST00000491944 CROCC2H7BZ55 1655 aa35.54■■■■□ 3.28
SCN5A-213ENST00000491944 TSPY4P0CV99 314 aa35.53■■■■□ 3.28
SCN5A-213ENST00000491944 TSPY10P0CW01 314 aa35.53■■■■□ 3.28
SCN5A-213ENST00000491944 DAPK1P53355 1430 aa35.53■■■■□ 3.28
SCN5A-213ENST00000491944 ABCC5O15440 1437 aa35.52■■■■□ 3.28
SCN5A-213ENST00000491944 ABCA6Q8N139 1617 aa35.5■■■■□ 3.27
SCN5A-213ENST00000491944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.49■■■■□ 3.27
SCN5A-213ENST00000491944 C9orf84Q5VXU9 1444 aa35.48■■■■□ 3.27
SCN5A-213ENST00000491944 DIP2CQ9Y2E4 1556 aa35.48■■■■□ 3.27
SCN5A-213ENST00000491944 RTEL1-TNFRSF6BF6WH68 1400 aa35.47■■■■□ 3.27
SCN5A-213ENST00000491944 MAST1Q9Y2H9 1570 aa35.46■■■■□ 3.27
SCN5A-213ENST00000491944 SHANK2Q9UPX8 1470 aa35.45■■■■□ 3.27
SCN5A-213ENST00000491944 ATP10AO60312 1499 aa35.44■■■■□ 3.26
SCN5A-213ENST00000491944 ITGAEP38570 1179 aa35.41■■■■□ 3.26
SCN5A-213ENST00000491944 CHIC2Q9UKJ5 165 aa35.38■■■■□ 3.26
SCN5A-213ENST00000491944 ADGBQ8N7X0 1667 aa35.38■■■■□ 3.25
SCN5A-213ENST00000491944 PLXNC1O60486 1568 aa35.35■■■■□ 3.25
SCN5A-213ENST00000491944 PTPRKQ15262 1439 aa35.33■■■■□ 3.25
SCN5A-213ENST00000491944 REREQ9P2R6 1566 aa35.33■■■■□ 3.25
SCN5A-213ENST00000491944 SIGLEC1Q9BZZ2 1709 aa35.32■■■■□ 3.25
SCN5A-213ENST00000491944 ARID4BQ4LE39 1312 aaPredicted RBP35.32■■■■□ 3.24
SCN5A-213ENST00000491944 A2MP01023 1474 aa35.32■■■■□ 3.24
SCN5A-213ENST00000491944 ANKRD30AQ9BXX3 1397 aa35.3■■■■□ 3.24
SCN5A-213ENST00000491944 ADGRL2O95490 1459 aa35.27■■■■□ 3.24
SCN5A-213ENST00000491944 RRP7BPQ9NSQ0 103 aa35.26■■■■□ 3.24
SCN5A-213ENST00000491944 KIF15Q9NS87 1388 aa35.25■■■■□ 3.23
SCN5A-213ENST00000491944 NCOA1Q15788 1441 aa35.24■■■■□ 3.23
SCN5A-213ENST00000491944 DHX29Q7Z478 1369 aaKnown RBP35.23■■■■□ 3.23
SCN5A-213ENST00000491944 AGLP35573 1532 aa35.2■■■■□ 3.23
SCN5A-213ENST00000491944 DUOX2Q9NRD8 1548 aa35.2■■■■□ 3.23
SCN5A-213ENST00000491944 ROCK1Q13464 1354 aa35.18■■■■□ 3.22
SCN5A-213ENST00000491944 MLECQ14165 292 aa35.16■■■■□ 3.22
SCN5A-213ENST00000491944 BCORL1Q5H9F3 1711 aa35.16■■■■□ 3.22
SCN5A-213ENST00000491944 KIF3BO15066 747 aa35.1■■■■□ 3.21
SCN5A-213ENST00000491944 EIF2AK4Q9P2K8 1649 aaKnown RBP35.1■■■■□ 3.21
SCN5A-213ENST00000491944 ERBINQ96RT1 1412 aa35.09■■■■□ 3.21
SCN5A-213ENST00000491944 ANKRD50Q9ULJ7 1429 aa35.05■■■■□ 3.2
SCN5A-213ENST00000491944 ADAMTSL3P82987 1691 aa35.04■■■■□ 3.2
SCN5A-213ENST00000491944 GGT6Q6P531 493 aa35.03■■■■□ 3.2
SCN5A-213ENST00000491944 MADDQ8WXG6 1647 aa35.01■■■■□ 3.2
SCN5A-213ENST00000491944 GCC2Q8IWJ2 1684 aa35.01■■■■□ 3.19
SCN5A-213ENST00000491944 FER1L4A9Z1Z3 1794 aa35.01■■■■□ 3.19
SCN5A-213ENST00000491944 KDM4FA0A1W2PPD8 638 aa35■■■■□ 3.19
SCN5A-213ENST00000491944 RNF17Q9BXT8 1623 aaKnown RBP35■■■■□ 3.19
SCN5A-213ENST00000491944 NAIPQ13075 1403 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms