RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ARID4BQ4LE39 1312 aaPredicted RBP24.33■■□□□ 1.48
CDC42SE1-205ENST00000491825 LRRIQ1Q96JM4 1722 aa24.32■■□□□ 1.48
CDC42SE1-205ENST00000491825 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
CDC42SE1-205ENST00000491825 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
CDC42SE1-205ENST00000491825 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
CDC42SE1-205ENST00000491825 MYO5CQ9NQX4 1742 aa24.29■■□□□ 1.48
CDC42SE1-205ENST00000491825 EFCAB2Q5VUJ9 269 aa24.28■■□□□ 1.48
CDC42SE1-205ENST00000491825 CLIP1P30622 1438 aa24.27■■□□□ 1.48
CDC42SE1-205ENST00000491825 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
CDC42SE1-205ENST00000491825 ARHGAP5Q13017 1502 aa24.22■■□□□ 1.47
CDC42SE1-205ENST00000491825 ILDR1Q86SU0 546 aaPredicted RBP24.22■■□□□ 1.47
CDC42SE1-205ENST00000491825 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
CDC42SE1-205ENST00000491825 KDM5CP41229 1560 aa24.2■■□□□ 1.47
CDC42SE1-205ENST00000491825 ZNF518AQ6AHZ1 1483 aa24.2■■□□□ 1.47
CDC42SE1-205ENST00000491825 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.47
CDC42SE1-205ENST00000491825 ATP10AO60312 1499 aa24.19■■□□□ 1.46
CDC42SE1-205ENST00000491825 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
CDC42SE1-205ENST00000491825 C9orf84Q5VXU9 1444 aa24.18■■□□□ 1.46
CDC42SE1-205ENST00000491825 PREX2Q70Z35 1606 aa24.15■■□□□ 1.46
CDC42SE1-205ENST00000491825 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
CDC42SE1-205ENST00000491825 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
CDC42SE1-205ENST00000491825 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
CDC42SE1-205ENST00000491825 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
CDC42SE1-205ENST00000491825 AFAP1Q8N556 730 aa24.14■■□□□ 1.45
CDC42SE1-205ENST00000491825 ABCC1P33527 1531 aa24.13■■□□□ 1.45
CDC42SE1-205ENST00000491825 MLECQ14165 292 aa24.1■■□□□ 1.45
CDC42SE1-205ENST00000491825 MLH3Q9UHC1 1453 aa24.1■■□□□ 1.45
CDC42SE1-205ENST00000491825 TRAPPC8Q9Y2L5 1435 aa24.1■■□□□ 1.45
CDC42SE1-205ENST00000491825 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
CDC42SE1-205ENST00000491825 REREQ9P2R6 1566 aa24.08■■□□□ 1.44
CDC42SE1-205ENST00000491825 FER1L4A9Z1Z3 1794 aa24.07■■□□□ 1.44
CDC42SE1-205ENST00000491825 ABCA6Q8N139 1617 aa24.05■■□□□ 1.44
CDC42SE1-205ENST00000491825 CDC42BPAQ5VT25 1732 aa24.04■■□□□ 1.44
CDC42SE1-205ENST00000491825 ITSN2Q9NZM3 1697 aa24.04■■□□□ 1.44
CDC42SE1-205ENST00000491825 GPATCH8Q9UKJ3 1502 aaKnown RBP24.02■■□□□ 1.44
CDC42SE1-205ENST00000491825 PLPPR3Q6T4P5 718 aa24.01■■□□□ 1.43
CDC42SE1-205ENST00000491825 HSPA2P54652 639 aa24■■□□□ 1.43
CDC42SE1-205ENST00000491825 SAMD9LQ8IVG5 1584 aa23.99■■□□□ 1.43
CDC42SE1-205ENST00000491825 AGLP35573 1532 aa23.99■■□□□ 1.43
CDC42SE1-205ENST00000491825 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
CDC42SE1-205ENST00000491825 SYCP2Q9BX26 1530 aa23.95■■□□□ 1.43
CDC42SE1-205ENST00000491825 MYT1LQ9UL68 1186 aa23.95■■□□□ 1.42
CDC42SE1-205ENST00000491825 CEBPAP49715 358 aaPredicted RBP23.93■■□□□ 1.42
CDC42SE1-205ENST00000491825 KIAA1107Q9UPP5 1409 aa23.93■■□□□ 1.42
CDC42SE1-205ENST00000491825 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
CDC42SE1-205ENST00000491825 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
CDC42SE1-205ENST00000491825 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
CDC42SE1-205ENST00000491825 PREX1Q8TCU6 1659 aa23.89■■□□□ 1.42
CDC42SE1-205ENST00000491825 FBXO41Q8TF61 875 aa23.89■■□□□ 1.41
CDC42SE1-205ENST00000491825 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
CDC42SE1-205ENST00000491825 CFDP1Q9UEE9 299 aaPredicted RBP23.88■■□□□ 1.41
CDC42SE1-205ENST00000491825 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
CDC42SE1-205ENST00000491825 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
CDC42SE1-205ENST00000491825 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
CDC42SE1-205ENST00000491825 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
CDC42SE1-205ENST00000491825 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
CDC42SE1-205ENST00000491825 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
CDC42SE1-205ENST00000491825 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
CDC42SE1-205ENST00000491825 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.4
CDC42SE1-205ENST00000491825 C3P01024 1663 aa23.83■■□□□ 1.4
CDC42SE1-205ENST00000491825 PLXNC1O60486 1568 aa23.82■■□□□ 1.4
CDC42SE1-205ENST00000491825 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
CDC42SE1-205ENST00000491825 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
CDC42SE1-205ENST00000491825 ZNF644Q9H582 1327 aaPredicted RBP23.79■■□□□ 1.4
CDC42SE1-205ENST00000491825 A2MP01023 1474 aa23.76■■□□□ 1.39
CDC42SE1-205ENST00000491825 ESF1Q9H501 851 aaKnown RBP23.76■■□□□ 1.39
CDC42SE1-205ENST00000491825 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
CDC42SE1-205ENST00000491825 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
CDC42SE1-205ENST00000491825 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
CDC42SE1-205ENST00000491825 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
CDC42SE1-205ENST00000491825 NPATQ14207 1427 aa23.72■■□□□ 1.39
CDC42SE1-205ENST00000491825 SUPT6HQ7KZ85 1726 aaKnown RBP23.71■■□□□ 1.39
CDC42SE1-205ENST00000491825 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
CDC42SE1-205ENST00000491825 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
CDC42SE1-205ENST00000491825 CERKQ8TCT0 537 aa23.68■■□□□ 1.38
CDC42SE1-205ENST00000491825 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
CDC42SE1-205ENST00000491825 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
CDC42SE1-205ENST00000491825 CAMSAP2Q08AD1 1489 aa23.66■■□□□ 1.38
CDC42SE1-205ENST00000491825 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
CDC42SE1-205ENST00000491825 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
CDC42SE1-205ENST00000491825 PTPRTO14522 1441 aa23.64■■□□□ 1.37
CDC42SE1-205ENST00000491825 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
CDC42SE1-205ENST00000491825 CLTCQ00610 1675 aaKnown RBP23.63■■□□□ 1.37
CDC42SE1-205ENST00000491825 LRRC9Q6ZRR7 1453 aa23.62■■□□□ 1.37
CDC42SE1-205ENST00000491825 PTPRKQ15262 1439 aa23.62■■□□□ 1.37
CDC42SE1-205ENST00000491825 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
CDC42SE1-205ENST00000491825 GGT6Q6P531 493 aa23.61■■□□□ 1.37
CDC42SE1-205ENST00000491825 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
CDC42SE1-205ENST00000491825 ARHGEF5Q12774 1597 aa23.58■■□□□ 1.37
CDC42SE1-205ENST00000491825 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
CDC42SE1-205ENST00000491825 CAMSAP1Q5T5Y3 1602 aa23.56■■□□□ 1.36
CDC42SE1-205ENST00000491825 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
CDC42SE1-205ENST00000491825 ZNF142P52746 1687 aaPredicted RBP23.55■■□□□ 1.36
CDC42SE1-205ENST00000491825 CEP170BQ9Y4F5 1589 aaPredicted RBP23.52■■□□□ 1.36
CDC42SE1-205ENST00000491825 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
CDC42SE1-205ENST00000491825 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
CDC42SE1-205ENST00000491825 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.36
CDC42SE1-205ENST00000491825 PLA2R1Q13018 1463 aa23.51■■□□□ 1.35
CDC42SE1-205ENST00000491825 KIF3BO15066 747 aa23.5■■□□□ 1.35
CDC42SE1-205ENST00000491825 KDM5DQ9BY66 1539 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms