RNA–Protein interactions for RNA: ENST00000491815.1

PRDM2-210, Transcript of PR/SET domain 2, humanhuman

TSL 2

Gene PRDM2, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-210ENST00000491815 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
PRDM2-210ENST00000491815 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
PRDM2-210ENST00000491815 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
PRDM2-210ENST00000491815 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
PRDM2-210ENST00000491815 PHLDB1Q86UU1 1377 aa18.79■□□□□ 0.6
PRDM2-210ENST00000491815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRDM2-210ENST00000491815 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
PRDM2-210ENST00000491815 ARAP3Q8WWN8 1544 aa18.78■□□□□ 0.6
PRDM2-210ENST00000491815 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
PRDM2-210ENST00000491815 NEO1Q92859 1461 aa18.77■□□□□ 0.6
PRDM2-210ENST00000491815 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
PRDM2-210ENST00000491815 CFAP74Q9C0B2 1584 aa18.74■□□□□ 0.59
PRDM2-210ENST00000491815 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
PRDM2-210ENST00000491815 TROQ12816 1431 aaPredicted RBP18.73■□□□□ 0.59
PRDM2-210ENST00000491815 KIF14Q15058 1648 aa18.72■□□□□ 0.59
PRDM2-210ENST00000491815 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
PRDM2-210ENST00000491815 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
PRDM2-210ENST00000491815 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
PRDM2-210ENST00000491815 RNF39Q9H2S5 420 aa18.68■□□□□ 0.58
PRDM2-210ENST00000491815 FANCAO15360 1455 aa18.67■□□□□ 0.58
PRDM2-210ENST00000491815 PLCH2O75038 1416 aa18.66■□□□□ 0.58
PRDM2-210ENST00000491815 FRMPD1Q5SYB0 1578 aa18.66■□□□□ 0.58
PRDM2-210ENST00000491815 RICTORQ6R327 1708 aa18.66■□□□□ 0.58
PRDM2-210ENST00000491815 ZNF219Q9P2Y4 722 aaPredicted RBP18.65■□□□□ 0.58
PRDM2-210ENST00000491815 AKNAQ7Z591 1439 aa18.63■□□□□ 0.57
PRDM2-210ENST00000491815 CDC42BPBQ9Y5S2 1711 aa18.6■□□□□ 0.57
PRDM2-210ENST00000491815 PREX2Q70Z35 1606 aa18.6■□□□□ 0.57
PRDM2-210ENST00000491815 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
PRDM2-210ENST00000491815 DENND4BO75064 1496 aaPredicted RBP18.59■□□□□ 0.57
PRDM2-210ENST00000491815 FKBP8Q14318 412 aa18.59■□□□□ 0.57
PRDM2-210ENST00000491815 ZMYM4Q5VZL5 1548 aa18.59■□□□□ 0.57
PRDM2-210ENST00000491815 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
PRDM2-210ENST00000491815 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
PRDM2-210ENST00000491815 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
PRDM2-210ENST00000491815 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
PRDM2-210ENST00000491815 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
PRDM2-210ENST00000491815 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
PRDM2-210ENST00000491815 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
PRDM2-210ENST00000491815 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
PRDM2-210ENST00000491815 KDM4FA0A1W2PPD8 638 aa18.53■□□□□ 0.56
PRDM2-210ENST00000491815 POGZQ7Z3K3 1410 aa18.53■□□□□ 0.56
PRDM2-210ENST00000491815 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.55
PRDM2-210ENST00000491815 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
PRDM2-210ENST00000491815 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
PRDM2-210ENST00000491815 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
PRDM2-210ENST00000491815 ABCC1P33527 1531 aa18.49■□□□□ 0.55
PRDM2-210ENST00000491815 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
PRDM2-210ENST00000491815 KDM5CP41229 1560 aa18.49■□□□□ 0.55
PRDM2-210ENST00000491815 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
PRDM2-210ENST00000491815 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
PRDM2-210ENST00000491815 ZNF518AQ6AHZ1 1483 aa18.47■□□□□ 0.55
PRDM2-210ENST00000491815 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
PRDM2-210ENST00000491815 MAP3K1Q13233 1512 aa18.47■□□□□ 0.55
PRDM2-210ENST00000491815 ZFYVE16Q7Z3T8 1539 aa18.47■□□□□ 0.55
PRDM2-210ENST00000491815 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
PRDM2-210ENST00000491815 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
PRDM2-210ENST00000491815 ADAMTSL3P82987 1691 aa18.43■□□□□ 0.54
PRDM2-210ENST00000491815 ARHGEF12Q9NZN5 1544 aa18.43■□□□□ 0.54
PRDM2-210ENST00000491815 BCORL1Q5H9F3 1711 aa18.43■□□□□ 0.54
PRDM2-210ENST00000491815 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
PRDM2-210ENST00000491815 YEATS2Q9ULM3 1422 aa18.41■□□□□ 0.54
PRDM2-210ENST00000491815 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
PRDM2-210ENST00000491815 SIGLEC1Q9BZZ2 1709 aa18.4■□□□□ 0.54
PRDM2-210ENST00000491815 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.54
PRDM2-210ENST00000491815 PLEKHH2Q8IVE3 1493 aa18.39■□□□□ 0.54
PRDM2-210ENST00000491815 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.54
PRDM2-210ENST00000491815 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
PRDM2-210ENST00000491815 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
PRDM2-210ENST00000491815 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
PRDM2-210ENST00000491815 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
PRDM2-210ENST00000491815 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
PRDM2-210ENST00000491815 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
PRDM2-210ENST00000491815 ATP10AO60312 1499 aa18.36■□□□□ 0.53
PRDM2-210ENST00000491815 CAPN15O75808 1086 aa18.36■□□□□ 0.53
PRDM2-210ENST00000491815 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
PRDM2-210ENST00000491815 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
PRDM2-210ENST00000491815 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
PRDM2-210ENST00000491815 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
PRDM2-210ENST00000491815 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
PRDM2-210ENST00000491815 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
PRDM2-210ENST00000491815 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
PRDM2-210ENST00000491815 INO80Q9ULG1 1556 aaPredicted RBP18.31■□□□□ 0.52
PRDM2-210ENST00000491815 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
PRDM2-210ENST00000491815 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
PRDM2-210ENST00000491815 AGLP35573 1532 aa18.28■□□□□ 0.52
PRDM2-210ENST00000491815 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
PRDM2-210ENST00000491815 PTPRMP28827 1452 aa18.27■□□□□ 0.52
PRDM2-210ENST00000491815 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
PRDM2-210ENST00000491815 FER1L4A9Z1Z3 1794 aa18.27■□□□□ 0.51
PRDM2-210ENST00000491815 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
PRDM2-210ENST00000491815 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
PRDM2-210ENST00000491815 POLA2Q14181 598 aa18.26■□□□□ 0.51
PRDM2-210ENST00000491815 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
PRDM2-210ENST00000491815 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
PRDM2-210ENST00000491815 HNRNPMP52272 730 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRDM2-210ENST00000491815 ADGBQ8N7X0 1667 aa18.23■□□□□ 0.51
PRDM2-210ENST00000491815 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
PRDM2-210ENST00000491815 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
PRDM2-210ENST00000491815 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
PRDM2-210ENST00000491815 PLXNC1O60486 1568 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms