RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
SEC61A1-206ENST00000491668 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
SEC61A1-206ENST00000491668 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
SEC61A1-206ENST00000491668 CDC42BPBQ9Y5S2 1711 aa20.54■□□□□ 0.88
SEC61A1-206ENST00000491668 ARHGAP5Q13017 1502 aa20.53■□□□□ 0.88
SEC61A1-206ENST00000491668 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
SEC61A1-206ENST00000491668 BCORL1Q5H9F3 1711 aa20.52■□□□□ 0.88
SEC61A1-206ENST00000491668 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.87
SEC61A1-206ENST00000491668 MAGI2Q86UL8 1455 aa20.51■□□□□ 0.87
SEC61A1-206ENST00000491668 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
SEC61A1-206ENST00000491668 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 MADDQ8WXG6 1647 aa20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 PTPRMP28827 1452 aa20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 ARID4BQ4LE39 1312 aaPredicted RBP20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
SEC61A1-206ENST00000491668 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
SEC61A1-206ENST00000491668 KDM5CP41229 1560 aa20.46■□□□□ 0.87
SEC61A1-206ENST00000491668 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
SEC61A1-206ENST00000491668 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
SEC61A1-206ENST00000491668 ABCC1P33527 1531 aa20.43■□□□□ 0.86
SEC61A1-206ENST00000491668 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
SEC61A1-206ENST00000491668 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
SEC61A1-206ENST00000491668 ATP10AO60312 1499 aa20.41■□□□□ 0.86
SEC61A1-206ENST00000491668 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
SEC61A1-206ENST00000491668 SAMD9LQ8IVG5 1584 aa20.38■□□□□ 0.85
SEC61A1-206ENST00000491668 C9orf84Q5VXU9 1444 aa20.38■□□□□ 0.85
SEC61A1-206ENST00000491668 RIMS1Q86UR5 1692 aaKnown RBP20.38■□□□□ 0.85
SEC61A1-206ENST00000491668 DIP2CQ9Y2E4 1556 aa20.37■□□□□ 0.85
SEC61A1-206ENST00000491668 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
SEC61A1-206ENST00000491668 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
SEC61A1-206ENST00000491668 ABCA6Q8N139 1617 aa20.35■□□□□ 0.85
SEC61A1-206ENST00000491668 MLECQ14165 292 aa20.34■□□□□ 0.85
SEC61A1-206ENST00000491668 ZNF777Q9ULD5 760 aaPredicted RBP20.33■□□□□ 0.85
SEC61A1-206ENST00000491668 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
SEC61A1-206ENST00000491668 TIAM1Q13009 1591 aa20.32■□□□□ 0.84
SEC61A1-206ENST00000491668 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
SEC61A1-206ENST00000491668 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
SEC61A1-206ENST00000491668 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
SEC61A1-206ENST00000491668 REREQ9P2R6 1566 aa20.31■□□□□ 0.84
SEC61A1-206ENST00000491668 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
SEC61A1-206ENST00000491668 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
SEC61A1-206ENST00000491668 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
SEC61A1-206ENST00000491668 VPS8Q8N3P4 1428 aa20.28■□□□□ 0.84
SEC61A1-206ENST00000491668 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
SEC61A1-206ENST00000491668 ZNF644Q9H582 1327 aaPredicted RBP20.27■□□□□ 0.84
SEC61A1-206ENST00000491668 LMTK3Q96Q04 1460 aa20.27■□□□□ 0.84
SEC61A1-206ENST00000491668 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
SEC61A1-206ENST00000491668 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
SEC61A1-206ENST00000491668 AGLP35573 1532 aa20.24■□□□□ 0.83
SEC61A1-206ENST00000491668 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
SEC61A1-206ENST00000491668 PLPPR3Q6T4P5 718 aa20.23■□□□□ 0.83
SEC61A1-206ENST00000491668 MBD5Q9P267 1494 aa20.23■□□□□ 0.83
SEC61A1-206ENST00000491668 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
SEC61A1-206ENST00000491668 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
SEC61A1-206ENST00000491668 ATP7AQ04656 1500 aa20.2■□□□□ 0.82
SEC61A1-206ENST00000491668 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
SEC61A1-206ENST00000491668 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
SEC61A1-206ENST00000491668 CEBPAP49715 358 aaPredicted RBP20.19■□□□□ 0.82
SEC61A1-206ENST00000491668 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
SEC61A1-206ENST00000491668 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
SEC61A1-206ENST00000491668 PLXNC1O60486 1568 aa20.16■□□□□ 0.82
SEC61A1-206ENST00000491668 HSPA2P54652 639 aa20.15■□□□□ 0.82
SEC61A1-206ENST00000491668 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
SEC61A1-206ENST00000491668 A2MP01023 1474 aa20.12■□□□□ 0.81
SEC61A1-206ENST00000491668 C3P01024 1663 aa20.11■□□□□ 0.81
SEC61A1-206ENST00000491668 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
SEC61A1-206ENST00000491668 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
SEC61A1-206ENST00000491668 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
SEC61A1-206ENST00000491668 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
SEC61A1-206ENST00000491668 ARHGEF5Q12774 1597 aa20.05■□□□□ 0.8
SEC61A1-206ENST00000491668 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
SEC61A1-206ENST00000491668 ILDR1Q86SU0 546 aaPredicted RBP20.05■□□□□ 0.8
SEC61A1-206ENST00000491668 MROH2AA6NES4 1674 aa20.03■□□□□ 0.8
SEC61A1-206ENST00000491668 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
SEC61A1-206ENST00000491668 MYOM3Q5VTT5 1437 aa20.02■□□□□ 0.8
SEC61A1-206ENST00000491668 RSPH4AQ5TD94 716 aa20.02■□□□□ 0.8
SEC61A1-206ENST00000491668 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.8
SEC61A1-206ENST00000491668 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
SEC61A1-206ENST00000491668 ZMYM3Q14202 1370 aa20.01■□□□□ 0.79
SEC61A1-206ENST00000491668 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
SEC61A1-206ENST00000491668 GGT6Q6P531 493 aa20■□□□□ 0.79
SEC61A1-206ENST00000491668 UHRF1BP1Q6BDS2 1440 aa20■□□□□ 0.79
SEC61A1-206ENST00000491668 MIA2Q96PC5 1412 aa20■□□□□ 0.79
SEC61A1-206ENST00000491668 STRCQ7RTU9 1775 aa19.97■□□□□ 0.79
SEC61A1-206ENST00000491668 NPATQ14207 1427 aa19.96■□□□□ 0.79
SEC61A1-206ENST00000491668 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
SEC61A1-206ENST00000491668 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
SEC61A1-206ENST00000491668 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
SEC61A1-206ENST00000491668 KIF3BO15066 747 aa19.93■□□□□ 0.78
SEC61A1-206ENST00000491668 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
SEC61A1-206ENST00000491668 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
SEC61A1-206ENST00000491668 APLP2Q06481 763 aa19.91■□□□□ 0.78
SEC61A1-206ENST00000491668 ABCC5O15440 1437 aa19.89■□□□□ 0.77
SEC61A1-206ENST00000491668 PTPN23Q9H3S7 1636 aa19.89■□□□□ 0.77
SEC61A1-206ENST00000491668 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
SEC61A1-206ENST00000491668 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
SEC61A1-206ENST00000491668 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
SEC61A1-206ENST00000491668 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
SEC61A1-206ENST00000491668 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms