RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
NCK1-211ENST00000491539 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.33
NCK1-211ENST00000491539 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
NCK1-211ENST00000491539 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
NCK1-211ENST00000491539 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
NCK1-211ENST00000491539 KDM5CP41229 1560 aa23.35■■□□□ 1.33
NCK1-211ENST00000491539 CDC42BPBQ9Y5S2 1711 aa23.34■■□□□ 1.33
NCK1-211ENST00000491539 DIP2CQ9Y2E4 1556 aa23.34■■□□□ 1.33
NCK1-211ENST00000491539 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.33
NCK1-211ENST00000491539 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.32
NCK1-211ENST00000491539 PLCH2O75038 1416 aa23.32■■□□□ 1.32
NCK1-211ENST00000491539 C3P01024 1663 aa23.32■■□□□ 1.32
NCK1-211ENST00000491539 C9orf84Q5VXU9 1444 aa23.31■■□□□ 1.32
NCK1-211ENST00000491539 MLECQ14165 292 aa23.29■■□□□ 1.32
NCK1-211ENST00000491539 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
NCK1-211ENST00000491539 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
NCK1-211ENST00000491539 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
NCK1-211ENST00000491539 ATP10AO60312 1499 aa23.27■■□□□ 1.32
NCK1-211ENST00000491539 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
NCK1-211ENST00000491539 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
NCK1-211ENST00000491539 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
NCK1-211ENST00000491539 ZNF518AQ6AHZ1 1483 aa23.22■■□□□ 1.31
NCK1-211ENST00000491539 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
NCK1-211ENST00000491539 ABCC1P33527 1531 aa23.21■■□□□ 1.31
NCK1-211ENST00000491539 CERKQ8TCT0 537 aa23.19■■□□□ 1.3
NCK1-211ENST00000491539 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
NCK1-211ENST00000491539 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
NCK1-211ENST00000491539 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
NCK1-211ENST00000491539 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
NCK1-211ENST00000491539 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
NCK1-211ENST00000491539 SETD1BQ9UPS6 1966 aaKnown RBP23.12■■□□□ 1.29
NCK1-211ENST00000491539 SPATA31D1Q6ZQQ2 1576 aa23.11■■□□□ 1.29
NCK1-211ENST00000491539 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
NCK1-211ENST00000491539 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
NCK1-211ENST00000491539 AGLP35573 1532 aa23.08■■□□□ 1.29
NCK1-211ENST00000491539 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.28
NCK1-211ENST00000491539 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
NCK1-211ENST00000491539 MLH3Q9UHC1 1453 aa23.07■■□□□ 1.28
NCK1-211ENST00000491539 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
NCK1-211ENST00000491539 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
NCK1-211ENST00000491539 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
NCK1-211ENST00000491539 CLIP1P30622 1438 aa23.06■■□□□ 1.28
NCK1-211ENST00000491539 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
NCK1-211ENST00000491539 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
NCK1-211ENST00000491539 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
NCK1-211ENST00000491539 MYO3AQ8NEV4 1616 aa23.03■■□□□ 1.28
NCK1-211ENST00000491539 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
NCK1-211ENST00000491539 SYCP2Q9BX26 1530 aa23.01■■□□□ 1.27
NCK1-211ENST00000491539 ILDR2Q71H61 639 aa23■■□□□ 1.27
NCK1-211ENST00000491539 INO80Q9ULG1 1556 aaPredicted RBP23■■□□□ 1.27
NCK1-211ENST00000491539 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
NCK1-211ENST00000491539 PTPRTO14522 1441 aa22.98■■□□□ 1.27
NCK1-211ENST00000491539 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
NCK1-211ENST00000491539 PLXNC1O60486 1568 aa22.97■■□□□ 1.27
NCK1-211ENST00000491539 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
NCK1-211ENST00000491539 DISP3Q9P2K9 1392 aa22.97■■□□□ 1.27
NCK1-211ENST00000491539 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
NCK1-211ENST00000491539 CASKIN1Q8WXD9 1431 aa22.94■■□□□ 1.26
NCK1-211ENST00000491539 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
NCK1-211ENST00000491539 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
NCK1-211ENST00000491539 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
NCK1-211ENST00000491539 FYCO1Q9BQS8 1478 aa22.9■■□□□ 1.26
NCK1-211ENST00000491539 IQSEC2Q5JU85 1478 aa22.88■■□□□ 1.25
NCK1-211ENST00000491539 CEP170BQ9Y4F5 1589 aaPredicted RBP22.88■■□□□ 1.25
NCK1-211ENST00000491539 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
NCK1-211ENST00000491539 CNTLNQ9NXG0 1405 aa22.87■■□□□ 1.25
NCK1-211ENST00000491539 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
NCK1-211ENST00000491539 DMRT2Q9Y5R5 561 aa22.84■■□□□ 1.25
NCK1-211ENST00000491539 NPATQ14207 1427 aa22.83■■□□□ 1.25
NCK1-211ENST00000491539 GPATCH8Q9UKJ3 1502 aaKnown RBP22.83■■□□□ 1.25
NCK1-211ENST00000491539 TIAM1Q13009 1591 aa22.8■■□□□ 1.24
NCK1-211ENST00000491539 SOCS7O14512 581 aa22.78■■□□□ 1.24
NCK1-211ENST00000491539 TCOF1Q13428 1488 aaKnown RBP22.77■■□□□ 1.24
NCK1-211ENST00000491539 A2MP01023 1474 aa22.76■■□□□ 1.23
NCK1-211ENST00000491539 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
NCK1-211ENST00000491539 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
NCK1-211ENST00000491539 PTPRKQ15262 1439 aa22.75■■□□□ 1.23
NCK1-211ENST00000491539 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
NCK1-211ENST00000491539 ESF1Q9H501 851 aaKnown RBP22.74■■□□□ 1.23
NCK1-211ENST00000491539 ZNF335Q9H4Z2 1342 aaPredicted RBP22.74■■□□□ 1.23
NCK1-211ENST00000491539 ZMYM3Q14202 1370 aa22.74■■□□□ 1.23
NCK1-211ENST00000491539 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
NCK1-211ENST00000491539 NCKAP5LQ9HCH0 1330 aa22.72■■□□□ 1.23
NCK1-211ENST00000491539 SPAG9O60271 1321 aaKnown RBP22.69■■□□□ 1.22
NCK1-211ENST00000491539 PLEKHH2Q8IVE3 1493 aa22.68■■□□□ 1.22
NCK1-211ENST00000491539 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
NCK1-211ENST00000491539 HNRNPMP52272 730 aaKnown RBP eCLIP22.68■■□□□ 1.223e-6■■■■□ 20.8
NCK1-211ENST00000491539 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
NCK1-211ENST00000491539 MED1Q15648 1581 aaPredicted RBP22.64■■□□□ 1.22
NCK1-211ENST00000491539 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
NCK1-211ENST00000491539 MBD5Q9P267 1494 aa22.62■■□□□ 1.21
NCK1-211ENST00000491539 ALKQ9UM73 1620 aa22.62■■□□□ 1.21
NCK1-211ENST00000491539 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
NCK1-211ENST00000491539 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
NCK1-211ENST00000491539 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
NCK1-211ENST00000491539 VWDEQ8N2E2 1590 aa22.59■■□□□ 1.21
NCK1-211ENST00000491539 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
NCK1-211ENST00000491539 UBAP1LF5GYI3 381 aa22.56■■□□□ 1.2
NCK1-211ENST00000491539 CFDP1Q9UEE9 299 aaPredicted RBP22.56■■□□□ 1.2
NCK1-211ENST00000491539 GGT6Q6P531 493 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms