RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 PPRC1Q5VV67 1664 aaKnown RBP33.3■■■□□ 2.92
VCPKMT-204ENST00000491402 MIA2Q96PC5 1412 aa33.29■■■□□ 2.92
VCPKMT-204ENST00000491402 TRIM26Q12899 539 aaPredicted RBP33.26■■■□□ 2.92
VCPKMT-204ENST00000491402 PTPN23Q9H3S7 1636 aa33.25■■■□□ 2.91
VCPKMT-204ENST00000491402 PLCH2O75038 1416 aa33.25■■■□□ 2.91
VCPKMT-204ENST00000491402 CFDP1Q9UEE9 299 aaPredicted RBP33.24■■■□□ 2.91
VCPKMT-204ENST00000491402 TEX14Q8IWB6 1497 aa33.23■■■□□ 2.91
VCPKMT-204ENST00000491402 ARHGAP5Q13017 1502 aa33.22■■■□□ 2.91
VCPKMT-204ENST00000491402 ARAP3Q8WWN8 1544 aa33.22■■■□□ 2.91
VCPKMT-204ENST00000491402 TCOF1Q13428 1488 aaKnown RBP33.19■■■□□ 2.9
VCPKMT-204ENST00000491402 EFCAB2Q5VUJ9 269 aa33.16■■■□□ 2.9
VCPKMT-204ENST00000491402 FANCAO15360 1455 aa33.16■■■□□ 2.9
VCPKMT-204ENST00000491402 CAMSAP2Q08AD1 1489 aa33.14■■■□□ 2.9
VCPKMT-204ENST00000491402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.14■■■□□ 2.9
VCPKMT-204ENST00000491402 FAM50AQ14320 339 aaKnown RBP33.14■■■□□ 2.9
VCPKMT-204ENST00000491402 ZNF777Q9ULD5 760 aaPredicted RBP33.13■■■□□ 2.89
VCPKMT-204ENST00000491402 SAMD9LQ8IVG5 1584 aa33.13■■■□□ 2.89
VCPKMT-204ENST00000491402 ZNF644Q9H582 1327 aaPredicted RBP33.12■■■□□ 2.89
VCPKMT-204ENST00000491402 NEO1Q92859 1461 aa33.1■■■□□ 2.89
VCPKMT-204ENST00000491402 AKNAQ7Z591 1439 aa33.09■■■□□ 2.89
VCPKMT-204ENST00000491402 CFAP74Q9C0B2 1584 aa33.05■■■□□ 2.88
VCPKMT-204ENST00000491402 PCGF6Q9BYE7 350 aa33.03■■■□□ 2.88
VCPKMT-204ENST00000491402 COL17A1Q9UMD9 1497 aaPredicted RBP33.03■■■□□ 2.88
VCPKMT-204ENST00000491402 PLEKHH2Q8IVE3 1493 aa33.01■■■□□ 2.87
VCPKMT-204ENST00000491402 ABCC1P33527 1531 aa33.01■■■□□ 2.87
VCPKMT-204ENST00000491402 ADGRL1O94910 1474 aa33■■■□□ 2.87
VCPKMT-204ENST00000491402 SYCP2Q9BX26 1530 aa32.99■■■□□ 2.87
VCPKMT-204ENST00000491402 KDM6BO15054 1643 aa32.99■■■□□ 2.87
VCPKMT-204ENST00000491402 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
VCPKMT-204ENST00000491402 SCAPERQ9BY12 1400 aa32.98■■■□□ 2.87
VCPKMT-204ENST00000491402 KIAA1107Q9UPP5 1409 aa32.98■■■□□ 2.87
VCPKMT-204ENST00000491402 MBD5Q9P267 1494 aa32.96■■■□□ 2.87
VCPKMT-204ENST00000491402 RAPGEF3O95398 923 aa32.96■■■□□ 2.87
VCPKMT-204ENST00000491402 ITGAEP38570 1179 aa32.95■■■□□ 2.87
VCPKMT-204ENST00000491402 ARHGEF5Q12774 1597 aa32.95■■■□□ 2.86
VCPKMT-204ENST00000491402 ARHGEF12Q9NZN5 1544 aa32.94■■■□□ 2.86
VCPKMT-204ENST00000491402 DAPK1P53355 1430 aa32.93■■■□□ 2.86
VCPKMT-204ENST00000491402 HNRNPMP52272 730 aaKnown RBP eCLIP32.93■■■□□ 2.86
VCPKMT-204ENST00000491402 ABCC5O15440 1437 aa32.91■■■□□ 2.86
VCPKMT-204ENST00000491402 CROCC2H7BZ55 1655 aa32.91■■■□□ 2.86
VCPKMT-204ENST00000491402 DENND4BO75064 1496 aaPredicted RBP32.91■■■□□ 2.86
VCPKMT-204ENST00000491402 PTPRKQ15262 1439 aa32.89■■■□□ 2.86
VCPKMT-204ENST00000491402 CCDC141Q6ZP82 1450 aa32.88■■■□□ 2.85
VCPKMT-204ENST00000491402 AFAP1Q8N556 730 aa32.86■■■□□ 2.85
VCPKMT-204ENST00000491402 RSPH4AQ5TD94 716 aa32.85■■■□□ 2.85
VCPKMT-204ENST00000491402 TRAPPC8Q9Y2L5 1435 aa32.84■■■□□ 2.85
VCPKMT-204ENST00000491402 POGZQ7Z3K3 1410 aa32.82■■■□□ 2.84
VCPKMT-204ENST00000491402 SHANK2Q9UPX8 1470 aa32.82■■■□□ 2.84
VCPKMT-204ENST00000491402 RICTORQ6R327 1708 aa32.81■■■□□ 2.84
VCPKMT-204ENST00000491402 FRMPD1Q5SYB0 1578 aa32.8■■■□□ 2.84
VCPKMT-204ENST00000491402 ZNF518AQ6AHZ1 1483 aa32.77■■■□□ 2.84
VCPKMT-204ENST00000491402 C9orf84Q5VXU9 1444 aa32.76■■■□□ 2.84
VCPKMT-204ENST00000491402 ADGBQ8N7X0 1667 aa32.76■■■□□ 2.84
VCPKMT-204ENST00000491402 TSPY4P0CV99 314 aa32.75■■■□□ 2.83
VCPKMT-204ENST00000491402 TSPY10P0CW01 314 aa32.75■■■□□ 2.83
VCPKMT-204ENST00000491402 CHIC2Q9UKJ5 165 aa32.75■■■□□ 2.83
VCPKMT-204ENST00000491402 MAST1Q9Y2H9 1570 aa32.75■■■□□ 2.83
VCPKMT-204ENST00000491402 KDM5CP41229 1560 aa32.72■■■□□ 2.83
VCPKMT-204ENST00000491402 MYT1LQ9UL68 1186 aa32.72■■■□□ 2.83
VCPKMT-204ENST00000491402 ADGRL2O95490 1459 aa32.71■■■□□ 2.83
VCPKMT-204ENST00000491402 ROCK1Q13464 1354 aa32.7■■■□□ 2.83
VCPKMT-204ENST00000491402 SPAG9O60271 1321 aaKnown RBP32.68■■■□□ 2.82
VCPKMT-204ENST00000491402 ZFYVE16Q7Z3T8 1539 aa32.68■■■□□ 2.82
VCPKMT-204ENST00000491402 NCOA1Q15788 1441 aa32.67■■■□□ 2.82
VCPKMT-204ENST00000491402 INO80Q9ULG1 1556 aaPredicted RBP32.67■■■□□ 2.82
VCPKMT-204ENST00000491402 ZMYM4Q5VZL5 1548 aa32.66■■■□□ 2.82
VCPKMT-204ENST00000491402 HFM1A2PYH4 1435 aa32.66■■■□□ 2.82
VCPKMT-204ENST00000491402 ANKRD30AQ9BXX3 1397 aa32.65■■■□□ 2.82
VCPKMT-204ENST00000491402 GCC2Q8IWJ2 1684 aa32.64■■■□□ 2.82
VCPKMT-204ENST00000491402 RTEL1-TNFRSF6BF6WH68 1400 aa32.64■■■□□ 2.82
VCPKMT-204ENST00000491402 ATP7AQ04656 1500 aa32.63■■■□□ 2.81
VCPKMT-204ENST00000491402 PLXNC1O60486 1568 aa32.63■■■□□ 2.81
VCPKMT-204ENST00000491402 RRP7BPQ9NSQ0 103 aa32.63■■■□□ 2.81
VCPKMT-204ENST00000491402 HECW2Q9P2P5 1572 aa32.63■■■□□ 2.81
VCPKMT-204ENST00000491402 YEATS2Q9ULM3 1422 aa32.62■■■□□ 2.81
VCPKMT-204ENST00000491402 NAIPQ13075 1403 aa32.62■■■□□ 2.81
VCPKMT-204ENST00000491402 MLH3Q9UHC1 1453 aa32.62■■■□□ 2.81
VCPKMT-204ENST00000491402 MAGI2Q86UL8 1455 aa32.61■■■□□ 2.81
VCPKMT-204ENST00000491402 KIDINS220Q9ULH0 1771 aa32.61■■■□□ 2.81
VCPKMT-204ENST00000491402 SETD5Q9C0A6 1442 aa32.57■■■□□ 2.8
VCPKMT-204ENST00000491402 KIF15Q9NS87 1388 aa32.56■■■□□ 2.8
VCPKMT-204ENST00000491402 ARHGEF40Q8TER5 1519 aa32.51■■■□□ 2.8
VCPKMT-204ENST00000491402 RAB3GAP2Q9H2M9 1393 aa32.5■■■□□ 2.79
VCPKMT-204ENST00000491402 ABCA6Q8N139 1617 aa32.49■■■□□ 2.79
VCPKMT-204ENST00000491402 ATP10AO60312 1499 aa32.48■■■□□ 2.79
VCPKMT-204ENST00000491402 DUOX2Q9NRD8 1548 aa32.48■■■□□ 2.79
VCPKMT-204ENST00000491402 DIP2CQ9Y2E4 1556 aa32.48■■■□□ 2.79
VCPKMT-204ENST00000491402 ANKRD50Q9ULJ7 1429 aa32.46■■■□□ 2.79
VCPKMT-204ENST00000491402 ERBINQ96RT1 1412 aa32.4■■■□□ 2.78
VCPKMT-204ENST00000491402 ARID4BQ4LE39 1312 aaPredicted RBP32.4■■■□□ 2.78
VCPKMT-204ENST00000491402 A2MP01023 1474 aa32.37■■■□□ 2.77
VCPKMT-204ENST00000491402 HRCP23327 699 aa32.37■■■□□ 2.77
VCPKMT-204ENST00000491402 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
VCPKMT-204ENST00000491402 SIGLEC1Q9BZZ2 1709 aa32.35■■■□□ 2.77
VCPKMT-204ENST00000491402 EIF2AK4Q9P2K8 1649 aaKnown RBP32.32■■■□□ 2.76
VCPKMT-204ENST00000491402 REREQ9P2R6 1566 aa32.31■■■□□ 2.76
VCPKMT-204ENST00000491402 MLECQ14165 292 aa32.28■■■□□ 2.76
VCPKMT-204ENST00000491402 BCORL1Q5H9F3 1711 aa32.25■■■□□ 2.75
VCPKMT-204ENST00000491402 ACIN1Q9UKV3 1341 aaKnown RBP32.24■■■□□ 2.75
VCPKMT-204ENST00000491402 UNC13BO14795 1591 aa32.24■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms