RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
PCOLCE-209ENST00000490909 CDC42BPBQ9Y5S2 1711 aa14.16□□□□□ -0.14
PCOLCE-209ENST00000490909 PLEKHD1A6NEE1 506 aa14.16□□□□□ -0.14
PCOLCE-209ENST00000490909 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
PCOLCE-209ENST00000490909 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
PCOLCE-209ENST00000490909 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
PCOLCE-209ENST00000490909 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
PCOLCE-209ENST00000490909 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
PCOLCE-209ENST00000490909 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
PCOLCE-209ENST00000490909 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
PCOLCE-209ENST00000490909 ITSN2Q9NZM3 1697 aa14.12□□□□□ -0.15
PCOLCE-209ENST00000490909 TROQ12816 1431 aaPredicted RBP14.11□□□□□ -0.15
PCOLCE-209ENST00000490909 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
PCOLCE-209ENST00000490909 ABCC1P33527 1531 aa14.1□□□□□ -0.15
PCOLCE-209ENST00000490909 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
PCOLCE-209ENST00000490909 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
PCOLCE-209ENST00000490909 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
PCOLCE-209ENST00000490909 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
PCOLCE-209ENST00000490909 ZNF518AQ6AHZ1 1483 aa14.09□□□□□ -0.15
PCOLCE-209ENST00000490909 ATP10AO60312 1499 aa14.07□□□□□ -0.16
PCOLCE-209ENST00000490909 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
PCOLCE-209ENST00000490909 C3P01024 1663 aa14.05□□□□□ -0.16
PCOLCE-209ENST00000490909 KIDINS220Q9ULH0 1771 aa14.05□□□□□ -0.16
PCOLCE-209ENST00000490909 HSPA2P54652 639 aa14.05□□□□□ -0.16
PCOLCE-209ENST00000490909 FBXO41Q8TF61 875 aa14.05□□□□□ -0.16
PCOLCE-209ENST00000490909 UBTFP17480 764 aaKnown RBP14.04□□□□□ -0.16
PCOLCE-209ENST00000490909 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
PCOLCE-209ENST00000490909 CLIP1P30622 1438 aa14.04□□□□□ -0.16
PCOLCE-209ENST00000490909 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
PCOLCE-209ENST00000490909 CASKIN1Q8WXD9 1431 aa14.03□□□□□ -0.16
PCOLCE-209ENST00000490909 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
PCOLCE-209ENST00000490909 MLECQ14165 292 aa14.02□□□□□ -0.17
PCOLCE-209ENST00000490909 FYCO1Q9BQS8 1478 aa14.01□□□□□ -0.17
PCOLCE-209ENST00000490909 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
PCOLCE-209ENST00000490909 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
PCOLCE-209ENST00000490909 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
PCOLCE-209ENST00000490909 AGLP35573 1532 aa14□□□□□ -0.17
PCOLCE-209ENST00000490909 EFCAB2Q5VUJ9 269 aa13.99□□□□□ -0.17
PCOLCE-209ENST00000490909 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
PCOLCE-209ENST00000490909 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
PCOLCE-209ENST00000490909 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
PCOLCE-209ENST00000490909 AFAP1Q8N556 730 aa13.97□□□□□ -0.17
PCOLCE-209ENST00000490909 MROH2AA6NES4 1674 aa13.96□□□□□ -0.17
PCOLCE-209ENST00000490909 PLXNC1O60486 1568 aa13.96□□□□□ -0.18
PCOLCE-209ENST00000490909 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
PCOLCE-209ENST00000490909 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
PCOLCE-209ENST00000490909 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
PCOLCE-209ENST00000490909 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
PCOLCE-209ENST00000490909 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
PCOLCE-209ENST00000490909 ATP7AQ04656 1500 aa13.92□□□□□ -0.18
PCOLCE-209ENST00000490909 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
PCOLCE-209ENST00000490909 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
PCOLCE-209ENST00000490909 TIAM1Q13009 1591 aa13.91□□□□□ -0.18
PCOLCE-209ENST00000490909 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
PCOLCE-209ENST00000490909 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
PCOLCE-209ENST00000490909 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
PCOLCE-209ENST00000490909 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
PCOLCE-209ENST00000490909 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
PCOLCE-209ENST00000490909 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
PCOLCE-209ENST00000490909 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
PCOLCE-209ENST00000490909 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
PCOLCE-209ENST00000490909 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
PCOLCE-209ENST00000490909 PTPRTO14522 1441 aa13.82□□□□□ -0.2
PCOLCE-209ENST00000490909 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
PCOLCE-209ENST00000490909 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
PCOLCE-209ENST00000490909 CEP170BQ9Y4F5 1589 aaPredicted RBP13.82□□□□□ -0.2
PCOLCE-209ENST00000490909 NPATQ14207 1427 aa13.81□□□□□ -0.2
PCOLCE-209ENST00000490909 A2MP01023 1474 aa13.81□□□□□ -0.2
PCOLCE-209ENST00000490909 PLEKHH2Q8IVE3 1493 aa13.81□□□□□ -0.2
PCOLCE-209ENST00000490909 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
PCOLCE-209ENST00000490909 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
PCOLCE-209ENST00000490909 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
PCOLCE-209ENST00000490909 CCNB3Q8WWL7 1395 aa13.78□□□□□ -0.2
PCOLCE-209ENST00000490909 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
PCOLCE-209ENST00000490909 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCOLCE-209ENST00000490909 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.21
PCOLCE-209ENST00000490909 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
PCOLCE-209ENST00000490909 SPATA31D1Q6ZQQ2 1576 aa13.76□□□□□ -0.21
PCOLCE-209ENST00000490909 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
PCOLCE-209ENST00000490909 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
PCOLCE-209ENST00000490909 CAMSAP2Q08AD1 1489 aa13.75□□□□□ -0.21
PCOLCE-209ENST00000490909 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
PCOLCE-209ENST00000490909 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
PCOLCE-209ENST00000490909 ZMYM3Q14202 1370 aa13.75□□□□□ -0.21
PCOLCE-209ENST00000490909 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
PCOLCE-209ENST00000490909 ZNF644Q9H582 1327 aaPredicted RBP13.74□□□□□ -0.21
PCOLCE-209ENST00000490909 DNMT1P26358 1616 aaKnown RBP13.74□□□□□ -0.21
PCOLCE-209ENST00000490909 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
PCOLCE-209ENST00000490909 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
PCOLCE-209ENST00000490909 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
PCOLCE-209ENST00000490909 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
PCOLCE-209ENST00000490909 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
PCOLCE-209ENST00000490909 CCDC141Q6ZP82 1450 aa13.72□□□□□ -0.21
PCOLCE-209ENST00000490909 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
PCOLCE-209ENST00000490909 ARHGEF5Q12774 1597 aa13.71□□□□□ -0.22
PCOLCE-209ENST00000490909 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
PCOLCE-209ENST00000490909 A2ML1A8K2U0 1454 aa13.69□□□□□ -0.22
PCOLCE-209ENST00000490909 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
PCOLCE-209ENST00000490909 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
PCOLCE-209ENST00000490909 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms