RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 ADAMTSL3P82987 1691 aa24.87■■□□□ 1.57
IMP4-216ENST00000490895 MAGI2Q86UL8 1455 aa24.86■■□□□ 1.57
IMP4-216ENST00000490895 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
IMP4-216ENST00000490895 YEATS2Q9ULM3 1422 aa24.84■■□□□ 1.57
IMP4-216ENST00000490895 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
IMP4-216ENST00000490895 ARHGAP5Q13017 1502 aa24.82■■□□□ 1.56
IMP4-216ENST00000490895 BCORL1Q5H9F3 1711 aa24.82■■□□□ 1.56
IMP4-216ENST00000490895 PTPRMP28827 1452 aa24.8■■□□□ 1.56
IMP4-216ENST00000490895 HECW2Q9P2P5 1572 aa24.8■■□□□ 1.56
IMP4-216ENST00000490895 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
IMP4-216ENST00000490895 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
IMP4-216ENST00000490895 MADDQ8WXG6 1647 aa24.75■■□□□ 1.55
IMP4-216ENST00000490895 AFAP1Q8N556 730 aa24.74■■□□□ 1.55
IMP4-216ENST00000490895 PREX2Q70Z35 1606 aa24.74■■□□□ 1.55
IMP4-216ENST00000490895 SIGLEC1Q9BZZ2 1709 aa24.72■■□□□ 1.55
IMP4-216ENST00000490895 ATP10AO60312 1499 aa24.72■■□□□ 1.55
IMP4-216ENST00000490895 CEP162Q5TB80 1403 aa24.72■■□□□ 1.55
IMP4-216ENST00000490895 KDM5CP41229 1560 aa24.71■■□□□ 1.55
IMP4-216ENST00000490895 ARHGEF12Q9NZN5 1544 aa24.68■■□□□ 1.54
IMP4-216ENST00000490895 C9orf84Q5VXU9 1444 aa24.68■■□□□ 1.54
IMP4-216ENST00000490895 ABCC1P33527 1531 aa24.67■■□□□ 1.54
IMP4-216ENST00000490895 CDC42BPAQ5VT25 1732 aa24.67■■□□□ 1.54
IMP4-216ENST00000490895 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
IMP4-216ENST00000490895 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
IMP4-216ENST00000490895 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.54
IMP4-216ENST00000490895 RIMS1Q86UR5 1692 aaKnown RBP24.64■■□□□ 1.53
IMP4-216ENST00000490895 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.53
IMP4-216ENST00000490895 MLECQ14165 292 aa24.63■■□□□ 1.53
IMP4-216ENST00000490895 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
IMP4-216ENST00000490895 MYT1LQ9UL68 1186 aa24.6■■□□□ 1.53
IMP4-216ENST00000490895 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
IMP4-216ENST00000490895 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
IMP4-216ENST00000490895 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.53
IMP4-216ENST00000490895 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.53
IMP4-216ENST00000490895 SAMD9LQ8IVG5 1584 aa24.58■■□□□ 1.52
IMP4-216ENST00000490895 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
IMP4-216ENST00000490895 REREQ9P2R6 1566 aa24.57■■□□□ 1.52
IMP4-216ENST00000490895 ABCA6Q8N139 1617 aa24.56■■□□□ 1.52
IMP4-216ENST00000490895 FER1L4A9Z1Z3 1794 aa24.54■■□□□ 1.52
IMP4-216ENST00000490895 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
IMP4-216ENST00000490895 EHBP1L1Q8N3D4 1523 aa24.54■■□□□ 1.52
IMP4-216ENST00000490895 LMTK3Q96Q04 1460 aa24.53■■□□□ 1.52
IMP4-216ENST00000490895 SYCP2Q9BX26 1530 aa24.53■■□□□ 1.52
IMP4-216ENST00000490895 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.52
IMP4-216ENST00000490895 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
IMP4-216ENST00000490895 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
IMP4-216ENST00000490895 AGLP35573 1532 aa24.51■■□□□ 1.51
IMP4-216ENST00000490895 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
IMP4-216ENST00000490895 TIAM1Q13009 1591 aa24.49■■□□□ 1.51
IMP4-216ENST00000490895 SPAG9O60271 1321 aaKnown RBP24.48■■□□□ 1.51
IMP4-216ENST00000490895 VPS8Q8N3P4 1428 aa24.46■■□□□ 1.51
IMP4-216ENST00000490895 ZNF644Q9H582 1327 aaPredicted RBP24.44■■□□□ 1.5
IMP4-216ENST00000490895 CEBPAP49715 358 aaPredicted RBP24.43■■□□□ 1.5
IMP4-216ENST00000490895 ATP7AQ04656 1500 aa24.4■■□□□ 1.5
IMP4-216ENST00000490895 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
IMP4-216ENST00000490895 HSPA2P54652 639 aa24.4■■□□□ 1.5
IMP4-216ENST00000490895 MBD5Q9P267 1494 aa24.39■■□□□ 1.5
IMP4-216ENST00000490895 INO80Q9ULG1 1556 aaPredicted RBP24.39■■□□□ 1.5
IMP4-216ENST00000490895 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
IMP4-216ENST00000490895 ILDR1Q86SU0 546 aaPredicted RBP24.37■■□□□ 1.49
IMP4-216ENST00000490895 A2MP01023 1474 aa24.34■■□□□ 1.49
IMP4-216ENST00000490895 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
IMP4-216ENST00000490895 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
IMP4-216ENST00000490895 PLXNC1O60486 1568 aa24.33■■□□□ 1.49
IMP4-216ENST00000490895 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
IMP4-216ENST00000490895 MAP3K1Q13233 1512 aa24.32■■□□□ 1.48
IMP4-216ENST00000490895 PREX1Q8TCU6 1659 aa24.31■■□□□ 1.48
IMP4-216ENST00000490895 RTEL1-TNFRSF6BF6WH68 1400 aa24.31■■□□□ 1.48
IMP4-216ENST00000490895 SETD1BQ9UPS6 1966 aaKnown RBP24.3■■□□□ 1.48
IMP4-216ENST00000490895 C3P01024 1663 aa24.3■■□□□ 1.48
IMP4-216ENST00000490895 CAMSAP2Q08AD1 1489 aa24.29■■□□□ 1.48
IMP4-216ENST00000490895 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
IMP4-216ENST00000490895 UHRF1BP1Q6BDS2 1440 aa24.27■■□□□ 1.48
IMP4-216ENST00000490895 RSPH4AQ5TD94 716 aa24.27■■□□□ 1.48
IMP4-216ENST00000490895 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
IMP4-216ENST00000490895 ADGBQ8N7X0 1667 aa24.25■■□□□ 1.47
IMP4-216ENST00000490895 ZMYM3Q14202 1370 aa24.23■■□□□ 1.47
IMP4-216ENST00000490895 MROH2AA6NES4 1674 aa24.22■■□□□ 1.47
IMP4-216ENST00000490895 DHX29Q7Z478 1369 aaKnown RBP24.22■■□□□ 1.47
IMP4-216ENST00000490895 GGT6Q6P531 493 aa24.21■■□□□ 1.47
IMP4-216ENST00000490895 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
IMP4-216ENST00000490895 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.47
IMP4-216ENST00000490895 NPATQ14207 1427 aa24.2■■□□□ 1.46
IMP4-216ENST00000490895 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
IMP4-216ENST00000490895 TSPY4P0CV99 314 aa24.16■■□□□ 1.46
IMP4-216ENST00000490895 TSPY10P0CW01 314 aa24.16■■□□□ 1.46
IMP4-216ENST00000490895 MIA2Q96PC5 1412 aa24.16■■□□□ 1.46
IMP4-216ENST00000490895 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
IMP4-216ENST00000490895 FBXO41Q8TF61 875 aa24.14■■□□□ 1.45
IMP4-216ENST00000490895 APLP2Q06481 763 aa24.13■■□□□ 1.45
IMP4-216ENST00000490895 STRCQ7RTU9 1775 aa24.13■■□□□ 1.45
IMP4-216ENST00000490895 KIF3BO15066 747 aa24.12■■□□□ 1.45
IMP4-216ENST00000490895 PTPRKQ15262 1439 aa24.11■■□□□ 1.45
IMP4-216ENST00000490895 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
IMP4-216ENST00000490895 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.45
IMP4-216ENST00000490895 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
IMP4-216ENST00000490895 NCOA1Q15788 1441 aa24.05■■□□□ 1.44
IMP4-216ENST00000490895 PTPRTO14522 1441 aa24.04■■□□□ 1.44
IMP4-216ENST00000490895 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
IMP4-216ENST00000490895 KDM5DQ9BY66 1539 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms