RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
ECM1-205ENST00000490346 SUPT6HQ7KZ85 1726 aaKnown RBP14.44□□□□□ -0.1
ECM1-205ENST00000490346 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
ECM1-205ENST00000490346 APLP2Q06481 763 aa14.44□□□□□ -0.1
ECM1-205ENST00000490346 KANK4Q5T7N3 995 aaPredicted RBP14.44□□□□□ -0.1
ECM1-205ENST00000490346 GPATCH8Q9UKJ3 1502 aaKnown RBP14.44□□□□□ -0.1
ECM1-205ENST00000490346 ADGRL1O94910 1474 aa14.44□□□□□ -0.1
ECM1-205ENST00000490346 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
ECM1-205ENST00000490346 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
ECM1-205ENST00000490346 NCOA2Q15596 1464 aa14.43□□□□□ -0.1
ECM1-205ENST00000490346 FRMPD1Q5SYB0 1578 aa14.43□□□□□ -0.1
ECM1-205ENST00000490346 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
ECM1-205ENST00000490346 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
ECM1-205ENST00000490346 ITSN2Q9NZM3 1697 aa14.39□□□□□ -0.11
ECM1-205ENST00000490346 CFDP1Q9UEE9 299 aaPredicted RBP14.39□□□□□ -0.11
ECM1-205ENST00000490346 ZNF777Q9ULD5 760 aaPredicted RBP14.39□□□□□ -0.11
ECM1-205ENST00000490346 ABCC1P33527 1531 aa14.39□□□□□ -0.11
ECM1-205ENST00000490346 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
ECM1-205ENST00000490346 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
ECM1-205ENST00000490346 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
ECM1-205ENST00000490346 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
ECM1-205ENST00000490346 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
ECM1-205ENST00000490346 AFAP1Q8N556 730 aa14.34□□□□□ -0.11
ECM1-205ENST00000490346 SYCP2Q9BX26 1530 aa14.34□□□□□ -0.11
ECM1-205ENST00000490346 TRAPPC8Q9Y2L5 1435 aa14.33□□□□□ -0.11
ECM1-205ENST00000490346 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
ECM1-205ENST00000490346 PLEKHH2Q8IVE3 1493 aa14.32□□□□□ -0.12
ECM1-205ENST00000490346 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
ECM1-205ENST00000490346 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
ECM1-205ENST00000490346 ZFYVE16Q7Z3T8 1539 aa14.31□□□□□ -0.12
ECM1-205ENST00000490346 KDM5CP41229 1560 aa14.31□□□□□ -0.12
ECM1-205ENST00000490346 MYOM3Q5VTT5 1437 aa14.31□□□□□ -0.12
ECM1-205ENST00000490346 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
ECM1-205ENST00000490346 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
ECM1-205ENST00000490346 CAMSAP2Q08AD1 1489 aa14.3□□□□□ -0.12
ECM1-205ENST00000490346 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
ECM1-205ENST00000490346 HECW2Q9P2P5 1572 aa14.29□□□□□ -0.12
ECM1-205ENST00000490346 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
ECM1-205ENST00000490346 MBD5Q9P267 1494 aa14.27□□□□□ -0.12
ECM1-205ENST00000490346 MIA2Q96PC5 1412 aa14.27□□□□□ -0.12
ECM1-205ENST00000490346 PPARGC1BQ86YN6 1023 aaKnown RBP14.27□□□□□ -0.13
ECM1-205ENST00000490346 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
ECM1-205ENST00000490346 KIDINS220Q9ULH0 1771 aa14.24□□□□□ -0.13
ECM1-205ENST00000490346 SPAG9O60271 1321 aaKnown RBP14.24□□□□□ -0.13
ECM1-205ENST00000490346 ABCA6Q8N139 1617 aa14.24□□□□□ -0.13
ECM1-205ENST00000490346 DIP2CQ9Y2E4 1556 aa14.24□□□□□ -0.13
ECM1-205ENST00000490346 ATP10AO60312 1499 aa14.24□□□□□ -0.13
ECM1-205ENST00000490346 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
ECM1-205ENST00000490346 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
ECM1-205ENST00000490346 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
ECM1-205ENST00000490346 SIGLEC1Q9BZZ2 1709 aa14.23□□□□□ -0.13
ECM1-205ENST00000490346 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
ECM1-205ENST00000490346 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
ECM1-205ENST00000490346 ARID4BQ4LE39 1312 aaPredicted RBP14.22□□□□□ -0.13
ECM1-205ENST00000490346 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
ECM1-205ENST00000490346 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
ECM1-205ENST00000490346 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
ECM1-205ENST00000490346 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
ECM1-205ENST00000490346 TCOF1Q13428 1488 aaKnown RBP14.18□□□□□ -0.14
ECM1-205ENST00000490346 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
ECM1-205ENST00000490346 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
ECM1-205ENST00000490346 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
ECM1-205ENST00000490346 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
ECM1-205ENST00000490346 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
ECM1-205ENST00000490346 MLECQ14165 292 aa14.16□□□□□ -0.14
ECM1-205ENST00000490346 ADAMTSL3P82987 1691 aa14.16□□□□□ -0.14
ECM1-205ENST00000490346 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
ECM1-205ENST00000490346 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
ECM1-205ENST00000490346 ABCC5O15440 1437 aa14.15□□□□□ -0.14
ECM1-205ENST00000490346 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
ECM1-205ENST00000490346 MAST1Q9Y2H9 1570 aa14.14□□□□□ -0.15
ECM1-205ENST00000490346 A2MP01023 1474 aa14.14□□□□□ -0.15
ECM1-205ENST00000490346 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
ECM1-205ENST00000490346 DAPK1P53355 1430 aa14.14□□□□□ -0.15
ECM1-205ENST00000490346 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
ECM1-205ENST00000490346 MADDQ8WXG6 1647 aa14.13□□□□□ -0.15
ECM1-205ENST00000490346 AGLP35573 1532 aa14.13□□□□□ -0.15
ECM1-205ENST00000490346 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
ECM1-205ENST00000490346 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
ECM1-205ENST00000490346 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
ECM1-205ENST00000490346 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
ECM1-205ENST00000490346 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
ECM1-205ENST00000490346 CHIC2Q9UKJ5 165 aa14.08□□□□□ -0.16
ECM1-205ENST00000490346 PTPRMP28827 1452 aa14.07□□□□□ -0.16
ECM1-205ENST00000490346 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
ECM1-205ENST00000490346 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
ECM1-205ENST00000490346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
ECM1-205ENST00000490346 KIF15Q9NS87 1388 aa14.05□□□□□ -0.16
ECM1-205ENST00000490346 KIF3BO15066 747 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 ITGAEP38570 1179 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 GGT6Q6P531 493 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 ANKRD30AQ9BXX3 1397 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
ECM1-205ENST00000490346 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
ECM1-205ENST00000490346 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
ECM1-205ENST00000490346 ADGRL2O95490 1459 aa14.03□□□□□ -0.16
ECM1-205ENST00000490346 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
ECM1-205ENST00000490346 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
ECM1-205ENST00000490346 ERBINQ96RT1 1412 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms