RNA–Protein interactions for RNA: ENST00000490230.1

PBXIP1-204, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 5

Gene PBXIP1, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-204ENST00000490230 SCAPERQ9BY12 1400 aa30.4■■■□□ 2.46
PBXIP1-204ENST00000490230 MTUS2Q5JR59 1369 aa30.39■■■□□ 2.45
PBXIP1-204ENST00000490230 CDC42BPAQ5VT25 1732 aa30.38■■■□□ 2.45
PBXIP1-204ENST00000490230 PREX2Q70Z35 1606 aa30.37■■■□□ 2.45
PBXIP1-204ENST00000490230 VPS8Q8N3P4 1428 aa30.37■■■□□ 2.45
PBXIP1-204ENST00000490230 POGZQ7Z3K3 1410 aa30.3■■■□□ 2.44
PBXIP1-204ENST00000490230 ZNF777Q9ULD5 760 aaPredicted RBP30.29■■■□□ 2.44
PBXIP1-204ENST00000490230 EHBP1L1Q8N3D4 1523 aa30.28■■■□□ 2.44
PBXIP1-204ENST00000490230 ZMYM4Q5VZL5 1548 aa30.27■■■□□ 2.44
PBXIP1-204ENST00000490230 GPATCH8Q9UKJ3 1502 aaKnown RBP30.27■■■□□ 2.44
PBXIP1-204ENST00000490230 TIAM1Q13009 1591 aa30.26■■■□□ 2.43
PBXIP1-204ENST00000490230 ARHGEF40Q8TER5 1519 aa30.26■■■□□ 2.43
PBXIP1-204ENST00000490230 CCNB3Q8WWL7 1395 aa30.25■■■□□ 2.43
PBXIP1-204ENST00000490230 YEATS2Q9ULM3 1422 aa30.24■■■□□ 2.43
PBXIP1-204ENST00000490230 AFAP1Q8N556 730 aa30.24■■■□□ 2.43
PBXIP1-204ENST00000490230 ZFYVE16Q7Z3T8 1539 aa30.23■■■□□ 2.43
PBXIP1-204ENST00000490230 ARID4BQ4LE39 1312 aaPredicted RBP30.22■■■□□ 2.43
PBXIP1-204ENST00000490230 ABCC1P33527 1531 aa30.21■■■□□ 2.43
PBXIP1-204ENST00000490230 ARHGEF12Q9NZN5 1544 aa30.21■■■□□ 2.43
PBXIP1-204ENST00000490230 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.43
PBXIP1-204ENST00000490230 MYT1LQ9UL68 1186 aa30.2■■■□□ 2.43
PBXIP1-204ENST00000490230 CFDP1Q9UEE9 299 aaPredicted RBP30.19■■■□□ 2.42
PBXIP1-204ENST00000490230 SAMD9LQ8IVG5 1584 aa30.19■■■□□ 2.42
PBXIP1-204ENST00000490230 ZNF518AQ6AHZ1 1483 aa30.19■■■□□ 2.42
PBXIP1-204ENST00000490230 TRAPPC8Q9Y2L5 1435 aa30.17■■■□□ 2.42
PBXIP1-204ENST00000490230 MAGI2Q86UL8 1455 aa30.17■■■□□ 2.42
PBXIP1-204ENST00000490230 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
PBXIP1-204ENST00000490230 NCOA2Q15596 1464 aa30.13■■■□□ 2.41
PBXIP1-204ENST00000490230 KDM5CP41229 1560 aa30.13■■■□□ 2.41
PBXIP1-204ENST00000490230 KANK4Q5T7N3 995 aaPredicted RBP30.13■■■□□ 2.41
PBXIP1-204ENST00000490230 SIGLEC1Q9BZZ2 1709 aa30.13■■■□□ 2.41
PBXIP1-204ENST00000490230 LRRC9Q6ZRR7 1453 aa30.12■■■□□ 2.41
PBXIP1-204ENST00000490230 HNRNPMP52272 730 aaKnown RBP eCLIP30.12■■■□□ 2.41
PBXIP1-204ENST00000490230 SYCP2Q9BX26 1530 aa30.12■■■□□ 2.41
PBXIP1-204ENST00000490230 HECW2Q9P2P5 1572 aa30.1■■■□□ 2.41
PBXIP1-204ENST00000490230 BCORL1Q5H9F3 1711 aa30.1■■■□□ 2.41
PBXIP1-204ENST00000490230 ZNF644Q9H582 1327 aaPredicted RBP30.09■■■□□ 2.41
PBXIP1-204ENST00000490230 ATP10AO60312 1499 aa30.07■■■□□ 2.4
PBXIP1-204ENST00000490230 APLP2Q06481 763 aa30.07■■■□□ 2.4
PBXIP1-204ENST00000490230 ADAMTSL3P82987 1691 aa30.07■■■□□ 2.4
PBXIP1-204ENST00000490230 MAP3K1Q13233 1512 aa30.06■■■□□ 2.4
PBXIP1-204ENST00000490230 MLECQ14165 292 aa30.05■■■□□ 2.4
PBXIP1-204ENST00000490230 PLEKHH2Q8IVE3 1493 aa30.03■■■□□ 2.4
PBXIP1-204ENST00000490230 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
PBXIP1-204ENST00000490230 MLH3Q9UHC1 1453 aa30.02■■■□□ 2.4
PBXIP1-204ENST00000490230 ABCA6Q8N139 1617 aa30.02■■■□□ 2.4
PBXIP1-204ENST00000490230 MADDQ8WXG6 1647 aa30.02■■■□□ 2.4
PBXIP1-204ENST00000490230 DIP2CQ9Y2E4 1556 aa30.02■■■□□ 2.4
PBXIP1-204ENST00000490230 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.39
PBXIP1-204ENST00000490230 KIDINS220Q9ULH0 1771 aa30■■■□□ 2.39
PBXIP1-204ENST00000490230 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
PBXIP1-204ENST00000490230 RIMS1Q86UR5 1692 aaKnown RBP29.95■■■□□ 2.39
PBXIP1-204ENST00000490230 PTPRMP28827 1452 aa29.93■■■□□ 2.38
PBXIP1-204ENST00000490230 CAMSAP2Q08AD1 1489 aa29.93■■■□□ 2.38
PBXIP1-204ENST00000490230 PLPPR3Q6T4P5 718 aa29.91■■■□□ 2.38
PBXIP1-204ENST00000490230 MBD5Q9P267 1494 aa29.91■■■□□ 2.38
PBXIP1-204ENST00000490230 ATP7AQ04656 1500 aa29.9■■■□□ 2.38
PBXIP1-204ENST00000490230 INO80Q9ULG1 1556 aaPredicted RBP29.88■■■□□ 2.37
PBXIP1-204ENST00000490230 FER1L4A9Z1Z3 1794 aa29.87■■■□□ 2.37
PBXIP1-204ENST00000490230 REREQ9P2R6 1566 aa29.86■■■□□ 2.37
PBXIP1-204ENST00000490230 MYOM3Q5VTT5 1437 aa29.85■■■□□ 2.37
PBXIP1-204ENST00000490230 CCDC141Q6ZP82 1450 aa29.8■■■□□ 2.36
PBXIP1-204ENST00000490230 AGLP35573 1532 aa29.78■■■□□ 2.36
PBXIP1-204ENST00000490230 MIA2Q96PC5 1412 aa29.76■■■□□ 2.35
PBXIP1-204ENST00000490230 ARHGEF5Q12774 1597 aa29.76■■■□□ 2.35
PBXIP1-204ENST00000490230 A2MP01023 1474 aa29.75■■■□□ 2.35
PBXIP1-204ENST00000490230 ADGBQ8N7X0 1667 aa29.75■■■□□ 2.35
PBXIP1-204ENST00000490230 RSPH4AQ5TD94 716 aa29.74■■■□□ 2.35
PBXIP1-204ENST00000490230 RTEL1-TNFRSF6BF6WH68 1400 aa29.72■■■□□ 2.35
PBXIP1-204ENST00000490230 TSPY4P0CV99 314 aa29.71■■■□□ 2.35
PBXIP1-204ENST00000490230 TSPY10P0CW01 314 aa29.71■■■□□ 2.35
PBXIP1-204ENST00000490230 CEBPAP49715 358 aaPredicted RBP29.71■■■□□ 2.35
PBXIP1-204ENST00000490230 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
PBXIP1-204ENST00000490230 PLXNC1O60486 1568 aa29.7■■■□□ 2.35
PBXIP1-204ENST00000490230 ESF1Q9H501 851 aaKnown RBP29.69■■■□□ 2.34
PBXIP1-204ENST00000490230 PPARGC1BQ86YN6 1023 aaKnown RBP29.67■■■□□ 2.34
PBXIP1-204ENST00000490230 FGD6Q6ZV73 1430 aa29.66■■■□□ 2.34
PBXIP1-204ENST00000490230 GGT6Q6P531 493 aa29.64■■■□□ 2.34
PBXIP1-204ENST00000490230 DHX29Q7Z478 1369 aaKnown RBP29.62■■■□□ 2.33
PBXIP1-204ENST00000490230 MAST1Q9Y2H9 1570 aa29.6■■■□□ 2.33
PBXIP1-204ENST00000490230 C3P01024 1663 aa29.6■■■□□ 2.33
PBXIP1-204ENST00000490230 TCOF1Q13428 1488 aaKnown RBP29.57■■■□□ 2.32
PBXIP1-204ENST00000490230 KIF3BO15066 747 aa29.57■■■□□ 2.32
PBXIP1-204ENST00000490230 CLTCQ00610 1675 aaKnown RBP29.56■■■□□ 2.32
PBXIP1-204ENST00000490230 ABCC5O15440 1437 aa29.56■■■□□ 2.32
PBXIP1-204ENST00000490230 CROCC2H7BZ55 1655 aa29.56■■■□□ 2.32
PBXIP1-204ENST00000490230 LMTK3Q96Q04 1460 aa29.55■■■□□ 2.32
PBXIP1-204ENST00000490230 FAM50AQ14320 339 aaKnown RBP29.55■■■□□ 2.32
PBXIP1-204ENST00000490230 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
PBXIP1-204ENST00000490230 DNMT1P26358 1616 aaKnown RBP29.53■■■□□ 2.32
PBXIP1-204ENST00000490230 DAPK1P53355 1430 aa29.53■■■□□ 2.32
PBXIP1-204ENST00000490230 HSPA2P54652 639 aa29.51■■■□□ 2.31
PBXIP1-204ENST00000490230 CHIC2Q9UKJ5 165 aa29.5■■■□□ 2.31
PBXIP1-204ENST00000490230 MROH2AA6NES4 1674 aa29.49■■■□□ 2.31
PBXIP1-204ENST00000490230 ZMYM3Q14202 1370 aa29.48■■■□□ 2.31
PBXIP1-204ENST00000490230 PREX1Q8TCU6 1659 aa29.47■■■□□ 2.31
PBXIP1-204ENST00000490230 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
PBXIP1-204ENST00000490230 SHANK2Q9UPX8 1470 aa29.47■■■□□ 2.31
PBXIP1-204ENST00000490230 PPP6R1Q9UPN7 881 aa29.43■■■□□ 2.3
PBXIP1-204ENST00000490230 KIF15Q9NS87 1388 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms