RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
TM9SF3-206ENST00000490192 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
TM9SF3-206ENST00000490192 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
TM9SF3-206ENST00000490192 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
TM9SF3-206ENST00000490192 SNPHO15079 494 aa13□□□□□ -0.33
TM9SF3-206ENST00000490192 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
TM9SF3-206ENST00000490192 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
TM9SF3-206ENST00000490192 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
TM9SF3-206ENST00000490192 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
TM9SF3-206ENST00000490192 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
TM9SF3-206ENST00000490192 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
TM9SF3-206ENST00000490192 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
TM9SF3-206ENST00000490192 POTEMA6NI47 508 aa12.86□□□□□ -0.35
TM9SF3-206ENST00000490192 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
TM9SF3-206ENST00000490192 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
TM9SF3-206ENST00000490192 ST18O60284 1047 aa12.83□□□□□ -0.36
TM9SF3-206ENST00000490192 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
TM9SF3-206ENST00000490192 PPP1R37O75864 691 aa12.78□□□□□ -0.36
TM9SF3-206ENST00000490192 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
TM9SF3-206ENST00000490192 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
TM9SF3-206ENST00000490192 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
TM9SF3-206ENST00000490192 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
TM9SF3-206ENST00000490192 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
TM9SF3-206ENST00000490192 ARXQ96QS3 562 aa12.76□□□□□ -0.37
TM9SF3-206ENST00000490192 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
TM9SF3-206ENST00000490192 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
TM9SF3-206ENST00000490192 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
TM9SF3-206ENST00000490192 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
TM9SF3-206ENST00000490192 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
TM9SF3-206ENST00000490192 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
TM9SF3-206ENST00000490192 EMP3P54852 163 aa12.67□□□□□ -0.38
TM9SF3-206ENST00000490192 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
TM9SF3-206ENST00000490192 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
TM9SF3-206ENST00000490192 KIF3CO14782 793 aa12.63□□□□□ -0.39
TM9SF3-206ENST00000490192 LMOD2Q6P5Q4 547 aa12.63□□□□□ -0.39
TM9SF3-206ENST00000490192 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
TM9SF3-206ENST00000490192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
TM9SF3-206ENST00000490192 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
TM9SF3-206ENST00000490192 WDR70Q9NW82 654 aa12.61□□□□□ -0.39
TM9SF3-206ENST00000490192 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
TM9SF3-206ENST00000490192 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
TM9SF3-206ENST00000490192 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
TM9SF3-206ENST00000490192 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
TM9SF3-206ENST00000490192 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
TM9SF3-206ENST00000490192 ERBB3P21860 1342 aa12.55□□□□□ -0.4
TM9SF3-206ENST00000490192 PDE4AP27815 886 aa12.54□□□□□ -0.4
TM9SF3-206ENST00000490192 FOXK1P85037 733 aa12.54□□□□□ -0.4
TM9SF3-206ENST00000490192 ARSIQ5FYB1 569 aa12.54□□□□□ -0.4
TM9SF3-206ENST00000490192 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
TM9SF3-206ENST00000490192 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
TM9SF3-206ENST00000490192 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
TM9SF3-206ENST00000490192 HOMEZQ8IX15 550 aa12.52□□□□□ -0.41
TM9SF3-206ENST00000490192 SLC34A2O95436 690 aa12.51□□□□□ -0.41
TM9SF3-206ENST00000490192 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
TM9SF3-206ENST00000490192 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
TM9SF3-206ENST00000490192 DSG2Q14126 1118 aa12.49□□□□□ -0.41
TM9SF3-206ENST00000490192 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
TM9SF3-206ENST00000490192 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
TM9SF3-206ENST00000490192 TBC1D12O60347 775 aa12.46□□□□□ -0.41
TM9SF3-206ENST00000490192 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
TM9SF3-206ENST00000490192 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
TM9SF3-206ENST00000490192 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.42
TM9SF3-206ENST00000490192 NUDT7P0C024 238 aa12.43□□□□□ -0.42
TM9SF3-206ENST00000490192 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
TM9SF3-206ENST00000490192 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
TM9SF3-206ENST00000490192 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
TM9SF3-206ENST00000490192 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
TM9SF3-206ENST00000490192 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
TM9SF3-206ENST00000490192 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
TM9SF3-206ENST00000490192 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
TM9SF3-206ENST00000490192 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
TM9SF3-206ENST00000490192 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
TM9SF3-206ENST00000490192 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
TM9SF3-206ENST00000490192 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
TM9SF3-206ENST00000490192 ZNF687Q8N1G0 1237 aa12.35□□□□□ -0.43
TM9SF3-206ENST00000490192 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
TM9SF3-206ENST00000490192 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
TM9SF3-206ENST00000490192 E2F4Q16254 413 aa12.33□□□□□ -0.44
TM9SF3-206ENST00000490192 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
TM9SF3-206ENST00000490192 SEMA3EO15041 775 aa12.32□□□□□ -0.44
TM9SF3-206ENST00000490192 MFSD10Q14728 455 aa12.32□□□□□ -0.44
TM9SF3-206ENST00000490192 TESPA1A2RU30 521 aaPredicted RBP12.31□□□□□ -0.44
TM9SF3-206ENST00000490192 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
TM9SF3-206ENST00000490192 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
TM9SF3-206ENST00000490192 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
TM9SF3-206ENST00000490192 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
TM9SF3-206ENST00000490192 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
TM9SF3-206ENST00000490192 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
TM9SF3-206ENST00000490192 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
TM9SF3-206ENST00000490192 SPNS2Q8IVW8 549 aa12.24□□□□□ -0.45
TM9SF3-206ENST00000490192 ZMYND10O75800 440 aa12.22□□□□□ -0.45
TM9SF3-206ENST00000490192 PBX2P40425 430 aa12.22□□□□□ -0.45
TM9SF3-206ENST00000490192 EVI5O60447 810 aa12.21□□□□□ -0.45
TM9SF3-206ENST00000490192 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
TM9SF3-206ENST00000490192 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
TM9SF3-206ENST00000490192 EMILIN3Q9NT22 766 aa12.19□□□□□ -0.46
TM9SF3-206ENST00000490192 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
TM9SF3-206ENST00000490192 ZNF454Q8N9F8 522 aa12.17□□□□□ -0.46
TM9SF3-206ENST00000490192 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
TM9SF3-206ENST00000490192 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms