RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
TSC1-206ENST00000490179 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
TSC1-206ENST00000490179 FANCAO15360 1455 aa22.79■■□□□ 1.24
TSC1-206ENST00000490179 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
TSC1-206ENST00000490179 NEO1Q92859 1461 aa22.77■■□□□ 1.24
TSC1-206ENST00000490179 CFDP1Q9UEE9 299 aaPredicted RBP22.75■■□□□ 1.23
TSC1-206ENST00000490179 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
TSC1-206ENST00000490179 MYOM3Q5VTT5 1437 aa22.73■■□□□ 1.23
TSC1-206ENST00000490179 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
TSC1-206ENST00000490179 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
TSC1-206ENST00000490179 KDM6BO15054 1643 aa22.68■■□□□ 1.22
TSC1-206ENST00000490179 SAMD9LQ8IVG5 1584 aa22.67■■□□□ 1.22
TSC1-206ENST00000490179 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
TSC1-206ENST00000490179 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
TSC1-206ENST00000490179 PLEKHH2Q8IVE3 1493 aa22.65■■□□□ 1.22
TSC1-206ENST00000490179 ABCC1P33527 1531 aa22.64■■□□□ 1.21
TSC1-206ENST00000490179 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
TSC1-206ENST00000490179 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
TSC1-206ENST00000490179 DENND4BO75064 1496 aaPredicted RBP22.62■■□□□ 1.21
TSC1-206ENST00000490179 CAMSAP2Q08AD1 1489 aa22.62■■□□□ 1.21
TSC1-206ENST00000490179 ZNF644Q9H582 1327 aaPredicted RBP22.61■■□□□ 1.21
TSC1-206ENST00000490179 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
TSC1-206ENST00000490179 COL17A1Q9UMD9 1497 aaPredicted RBP22.6■■□□□ 1.21
TSC1-206ENST00000490179 SYCP2Q9BX26 1530 aa22.6■■□□□ 1.21
TSC1-206ENST00000490179 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
TSC1-206ENST00000490179 ARHGEF12Q9NZN5 1544 aa22.57■■□□□ 1.2
TSC1-206ENST00000490179 HNRNPMP52272 730 aaKnown RBP eCLIP22.57■■□□□ 1.23e-16■■■■■ 29.1
TSC1-206ENST00000490179 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
TSC1-206ENST00000490179 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
TSC1-206ENST00000490179 RAPGEF3O95398 923 aa22.56■■□□□ 1.2
TSC1-206ENST00000490179 TCOF1Q13428 1488 aaKnown RBP22.55■■□□□ 1.2
TSC1-206ENST00000490179 FRMPD1Q5SYB0 1578 aa22.55■■□□□ 1.2
TSC1-206ENST00000490179 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
TSC1-206ENST00000490179 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
TSC1-206ENST00000490179 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
TSC1-206ENST00000490179 MBD5Q9P267 1494 aa22.52■■□□□ 1.2
TSC1-206ENST00000490179 ARHGEF5Q12774 1597 aa22.51■■□□□ 1.19
TSC1-206ENST00000490179 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
TSC1-206ENST00000490179 CCDC141Q6ZP82 1450 aa22.5■■□□□ 1.19
TSC1-206ENST00000490179 RSPH4AQ5TD94 716 aa22.5■■□□□ 1.19
TSC1-206ENST00000490179 KDM5CP41229 1560 aa22.49■■□□□ 1.19
TSC1-206ENST00000490179 RRBP1Q9P2E9 1410 aaKnown RBP22.48■■□□□ 1.19
TSC1-206ENST00000490179 ZMYM4Q5VZL5 1548 aa22.48■■□□□ 1.19
TSC1-206ENST00000490179 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
TSC1-206ENST00000490179 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
TSC1-206ENST00000490179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.45■■□□□ 1.18
TSC1-206ENST00000490179 HECW2Q9P2P5 1572 aa22.45■■□□□ 1.18
TSC1-206ENST00000490179 DNMT1P26358 1616 aaKnown RBP22.45■■□□□ 1.18
TSC1-206ENST00000490179 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
TSC1-206ENST00000490179 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
TSC1-206ENST00000490179 MAGI2Q86UL8 1455 aa22.44■■□□□ 1.18
TSC1-206ENST00000490179 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
TSC1-206ENST00000490179 MLH3Q9UHC1 1453 aa22.42■■□□□ 1.18
TSC1-206ENST00000490179 DAPK1P53355 1430 aa22.42■■□□□ 1.18
TSC1-206ENST00000490179 ZFYVE16Q7Z3T8 1539 aa22.41■■□□□ 1.18
TSC1-206ENST00000490179 ABCC5O15440 1437 aa22.41■■□□□ 1.18
TSC1-206ENST00000490179 INO80Q9ULG1 1556 aaPredicted RBP22.4■■□□□ 1.18
TSC1-206ENST00000490179 ATP7AQ04656 1500 aa22.4■■□□□ 1.18
TSC1-206ENST00000490179 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.17
TSC1-206ENST00000490179 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
TSC1-206ENST00000490179 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
TSC1-206ENST00000490179 SHANK2Q9UPX8 1470 aa22.38■■□□□ 1.17
TSC1-206ENST00000490179 RTEL1-TNFRSF6BF6WH68 1400 aa22.38■■□□□ 1.17
TSC1-206ENST00000490179 C9orf84Q5VXU9 1444 aa22.37■■□□□ 1.17
TSC1-206ENST00000490179 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
TSC1-206ENST00000490179 ITGAEP38570 1179 aa22.36■■□□□ 1.17
TSC1-206ENST00000490179 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
TSC1-206ENST00000490179 DIP2CQ9Y2E4 1556 aa22.33■■□□□ 1.17
TSC1-206ENST00000490179 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
TSC1-206ENST00000490179 ADGBQ8N7X0 1667 aa22.32■■□□□ 1.16
TSC1-206ENST00000490179 ATP10AO60312 1499 aa22.31■■□□□ 1.16
TSC1-206ENST00000490179 PLXNC1O60486 1568 aa22.3■■□□□ 1.16
TSC1-206ENST00000490179 PTPRKQ15262 1439 aa22.29■■□□□ 1.16
TSC1-206ENST00000490179 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
TSC1-206ENST00000490179 ADGRL2O95490 1459 aa22.27■■□□□ 1.16
TSC1-206ENST00000490179 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
TSC1-206ENST00000490179 A2MP01023 1474 aa22.25■■□□□ 1.15
TSC1-206ENST00000490179 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
TSC1-206ENST00000490179 ROCK1Q13464 1354 aa22.24■■□□□ 1.15
TSC1-206ENST00000490179 KIF15Q9NS87 1388 aa22.24■■□□□ 1.15
TSC1-206ENST00000490179 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
TSC1-206ENST00000490179 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
TSC1-206ENST00000490179 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
TSC1-206ENST00000490179 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
TSC1-206ENST00000490179 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
TSC1-206ENST00000490179 AGLP35573 1532 aa22.18■■□□□ 1.14
TSC1-206ENST00000490179 ERBINQ96RT1 1412 aa22.15■■□□□ 1.14
TSC1-206ENST00000490179 TRIM26Q12899 539 aaPredicted RBP22.15■■□□□ 1.14
TSC1-206ENST00000490179 EIF2AK4Q9P2K8 1649 aaKnown RBP22.14■■□□□ 1.14
TSC1-206ENST00000490179 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
TSC1-206ENST00000490179 KIF3BO15066 747 aa22.12■■□□□ 1.13
TSC1-206ENST00000490179 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
TSC1-206ENST00000490179 MLECQ14165 292 aa22.11■■□□□ 1.13
TSC1-206ENST00000490179 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
TSC1-206ENST00000490179 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
TSC1-206ENST00000490179 NAIPQ13075 1403 aa22.09■■□□□ 1.13
TSC1-206ENST00000490179 GGT6Q6P531 493 aa22.07■■□□□ 1.12
TSC1-206ENST00000490179 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
TSC1-206ENST00000490179 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
TSC1-206ENST00000490179 ESF1Q9H501 851 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms