RNA–Protein interactions for RNA: ENST00000490117.5

CPA4-208, Transcript of carboxypeptidase A4, humanhuman

TSL 2

Gene CPA4, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-208ENST00000490117 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
CPA4-208ENST00000490117 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
CPA4-208ENST00000490117 CCNB3Q8WWL7 1395 aa11.48□□□□□ -0.57
CPA4-208ENST00000490117 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
CPA4-208ENST00000490117 ARHGAP5Q13017 1502 aa11.47□□□□□ -0.57
CPA4-208ENST00000490117 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
CPA4-208ENST00000490117 GLI2P10070 1586 aa11.46□□□□□ -0.57
CPA4-208ENST00000490117 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
CPA4-208ENST00000490117 CROCC2H7BZ55 1655 aa11.45□□□□□ -0.58
CPA4-208ENST00000490117 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
CPA4-208ENST00000490117 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
CPA4-208ENST00000490117 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
CPA4-208ENST00000490117 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
CPA4-208ENST00000490117 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
CPA4-208ENST00000490117 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
CPA4-208ENST00000490117 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
CPA4-208ENST00000490117 SYCP2Q9BX26 1530 aa11.41□□□□□ -0.58
CPA4-208ENST00000490117 ADRA2BP18089 450 aa11.41□□□□□ -0.58
CPA4-208ENST00000490117 FAM69CQ0P6D2 419 aa11.41□□□□□ -0.58
CPA4-208ENST00000490117 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
CPA4-208ENST00000490117 CD109Q6YHK3 1445 aa11.41□□□□□ -0.58
CPA4-208ENST00000490117 ABCC1P33527 1531 aa11.4□□□□□ -0.58
CPA4-208ENST00000490117 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
CPA4-208ENST00000490117 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.58
CPA4-208ENST00000490117 PLCH2O75038 1416 aa11.4□□□□□ -0.58
CPA4-208ENST00000490117 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
CPA4-208ENST00000490117 ARAP3Q8WWN8 1544 aa11.4□□□□□ -0.59
CPA4-208ENST00000490117 CFDP1Q9UEE9 299 aaPredicted RBP11.39□□□□□ -0.59
CPA4-208ENST00000490117 FANCAO15360 1455 aa11.38□□□□□ -0.59
CPA4-208ENST00000490117 ITGAEP38570 1179 aa11.38□□□□□ -0.59
CPA4-208ENST00000490117 ARHGEF12Q9NZN5 1544 aa11.37□□□□□ -0.59
CPA4-208ENST00000490117 TRIM26Q12899 539 aaPredicted RBP11.37□□□□□ -0.59
CPA4-208ENST00000490117 RICTORQ6R327 1708 aa11.36□□□□□ -0.59
CPA4-208ENST00000490117 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
CPA4-208ENST00000490117 ARHGEF5Q12774 1597 aa11.36□□□□□ -0.59
CPA4-208ENST00000490117 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
CPA4-208ENST00000490117 ADGRL1O94910 1474 aa11.35□□□□□ -0.59
CPA4-208ENST00000490117 DAPK1P53355 1430 aa11.34□□□□□ -0.59
CPA4-208ENST00000490117 AKNAQ7Z591 1439 aa11.34□□□□□ -0.59
CPA4-208ENST00000490117 GCC2Q8IWJ2 1684 aa11.33□□□□□ -0.6
CPA4-208ENST00000490117 FRMPD1Q5SYB0 1578 aa11.33□□□□□ -0.6
CPA4-208ENST00000490117 EFCAB2Q5VUJ9 269 aa11.33□□□□□ -0.6
CPA4-208ENST00000490117 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
CPA4-208ENST00000490117 HNRNPMP52272 730 aaKnown RBP eCLIP11.32□□□□□ -0.6
CPA4-208ENST00000490117 ABCC5O15440 1437 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 TRAPPC8Q9Y2L5 1435 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 NEO1Q92859 1461 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 MBD5Q9P267 1494 aa11.32□□□□□ -0.6
CPA4-208ENST00000490117 SCAPERQ9BY12 1400 aa11.31□□□□□ -0.6
CPA4-208ENST00000490117 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
CPA4-208ENST00000490117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPA4-208ENST00000490117 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
CPA4-208ENST00000490117 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
CPA4-208ENST00000490117 KDM6BO15054 1643 aa11.29□□□□□ -0.6
CPA4-208ENST00000490117 CHIC2Q9UKJ5 165 aa11.29□□□□□ -0.6
CPA4-208ENST00000490117 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
CPA4-208ENST00000490117 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
CPA4-208ENST00000490117 KDM5CP41229 1560 aa11.28□□□□□ -0.6
CPA4-208ENST00000490117 ABCA6Q8N139 1617 aa11.27□□□□□ -0.6
CPA4-208ENST00000490117 C9orf84Q5VXU9 1444 aa11.27□□□□□ -0.6
CPA4-208ENST00000490117 POGZQ7Z3K3 1410 aa11.27□□□□□ -0.6
CPA4-208ENST00000490117 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.6
CPA4-208ENST00000490117 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.6
CPA4-208ENST00000490117 ATP7AQ04656 1500 aa11.27□□□□□ -0.61
CPA4-208ENST00000490117 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
CPA4-208ENST00000490117 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
CPA4-208ENST00000490117 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
CPA4-208ENST00000490117 AFAP1Q8N556 730 aa11.25□□□□□ -0.61
CPA4-208ENST00000490117 ZNF518AQ6AHZ1 1483 aa11.25□□□□□ -0.61
CPA4-208ENST00000490117 RRP7BPQ9NSQ0 103 aa11.24□□□□□ -0.61
CPA4-208ENST00000490117 ADGRL2O95490 1459 aa11.24□□□□□ -0.61
CPA4-208ENST00000490117 DIP2CQ9Y2E4 1556 aa11.24□□□□□ -0.61
CPA4-208ENST00000490117 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
CPA4-208ENST00000490117 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
CPA4-208ENST00000490117 ZMYM4Q5VZL5 1548 aa11.23□□□□□ -0.61
CPA4-208ENST00000490117 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
CPA4-208ENST00000490117 NAIPQ13075 1403 aa11.21□□□□□ -0.61
CPA4-208ENST00000490117 SPAG9O60271 1321 aaKnown RBP11.21□□□□□ -0.61
CPA4-208ENST00000490117 ARHGEF40Q8TER5 1519 aa11.2□□□□□ -0.62
CPA4-208ENST00000490117 YEATS2Q9ULM3 1422 aa11.2□□□□□ -0.62
CPA4-208ENST00000490117 TSPY4P0CV99 314 aa11.2□□□□□ -0.62
CPA4-208ENST00000490117 TSPY10P0CW01 314 aa11.2□□□□□ -0.62
CPA4-208ENST00000490117 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
CPA4-208ENST00000490117 ANKRD30AQ9BXX3 1397 aa11.19□□□□□ -0.62
CPA4-208ENST00000490117 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 CEP152O94986 1710 aa11.18□□□□□ -0.62
CPA4-208ENST00000490117 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
CPA4-208ENST00000490117 RTEL1-TNFRSF6BF6WH68 1400 aa11.17□□□□□ -0.62
CPA4-208ENST00000490117 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
CPA4-208ENST00000490117 UNC13BO14795 1591 aa11.16□□□□□ -0.62
CPA4-208ENST00000490117 A2MP01023 1474 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms