RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TSPYL2Q9H2G4 693 aaPredicted RBP14.22□□□□□ -0.13
RAB3GAP1-205ENST00000489858 CLSPNQ9HAW4 1339 aa14.21□□□□□ -0.13
RAB3GAP1-205ENST00000489858 MIER1Q8N108 512 aa14.21□□□□□ -0.13
RAB3GAP1-205ENST00000489858 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
RAB3GAP1-205ENST00000489858 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.14
RAB3GAP1-205ENST00000489858 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
RAB3GAP1-205ENST00000489858 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
RAB3GAP1-205ENST00000489858 ADAMTS12P58397 1594 aa14.18□□□□□ -0.14
RAB3GAP1-205ENST00000489858 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
RAB3GAP1-205ENST00000489858 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
RAB3GAP1-205ENST00000489858 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
RAB3GAP1-205ENST00000489858 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
RAB3GAP1-205ENST00000489858 WDR62O43379 1518 aa14.15□□□□□ -0.14
RAB3GAP1-205ENST00000489858 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
RAB3GAP1-205ENST00000489858 ATMINO43313 823 aaPredicted RBP14.13□□□□□ -0.15
RAB3GAP1-205ENST00000489858 IFT140Q96RY7 1462 aa14.12□□□□□ -0.15
RAB3GAP1-205ENST00000489858 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
RAB3GAP1-205ENST00000489858 P3H3Q8IVL6 736 aa14.12□□□□□ -0.15
RAB3GAP1-205ENST00000489858 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
RAB3GAP1-205ENST00000489858 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
RAB3GAP1-205ENST00000489858 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
RAB3GAP1-205ENST00000489858 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
RAB3GAP1-205ENST00000489858 IQGAP2Q13576 1575 aa14.1□□□□□ -0.15
RAB3GAP1-205ENST00000489858 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
RAB3GAP1-205ENST00000489858 RASEFQ8IZ41 740 aa14.09□□□□□ -0.15
RAB3GAP1-205ENST00000489858 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
RAB3GAP1-205ENST00000489858 SLC39A7Q92504 469 aa14.09□□□□□ -0.15
RAB3GAP1-205ENST00000489858 EHBP1L1Q8N3D4 1523 aa14.09□□□□□ -0.15
RAB3GAP1-205ENST00000489858 LRRIQ1Q96JM4 1722 aa14.08□□□□□ -0.16
RAB3GAP1-205ENST00000489858 C7P10643 843 aa14.08□□□□□ -0.16
RAB3GAP1-205ENST00000489858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB3GAP1-205ENST00000489858 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
RAB3GAP1-205ENST00000489858 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
RAB3GAP1-205ENST00000489858 CCDC18Q5T9S5 1454 aa14.06□□□□□ -0.16
RAB3GAP1-205ENST00000489858 METRNQ9UJH8 293 aa14.06□□□□□ -0.16
RAB3GAP1-205ENST00000489858 SUPT6HQ7KZ85 1726 aaKnown RBP14.06□□□□□ -0.16
RAB3GAP1-205ENST00000489858 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
RAB3GAP1-205ENST00000489858 FKBP8Q14318 412 aa14.04□□□□□ -0.16
RAB3GAP1-205ENST00000489858 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
RAB3GAP1-205ENST00000489858 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
RAB3GAP1-205ENST00000489858 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
RAB3GAP1-205ENST00000489858 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
RAB3GAP1-205ENST00000489858 UGGT2Q9NYU1 1516 aa14.02□□□□□ -0.16
RAB3GAP1-205ENST00000489858 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
RAB3GAP1-205ENST00000489858 ITGAEP38570 1179 aa14.02□□□□□ -0.17
RAB3GAP1-205ENST00000489858 MAP3K13O43283 966 aa14.01□□□□□ -0.17
RAB3GAP1-205ENST00000489858 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
RAB3GAP1-205ENST00000489858 FAM50AQ14320 339 aaKnown RBP14.01□□□□□ -0.17
RAB3GAP1-205ENST00000489858 ERCC6Q03468 1493 aa14□□□□□ -0.17
RAB3GAP1-205ENST00000489858 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
RAB3GAP1-205ENST00000489858 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
RAB3GAP1-205ENST00000489858 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
RAB3GAP1-205ENST00000489858 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
RAB3GAP1-205ENST00000489858 TIE1P35590 1138 aa13.97□□□□□ -0.17
RAB3GAP1-205ENST00000489858 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
RAB3GAP1-205ENST00000489858 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
RAB3GAP1-205ENST00000489858 NUBP1P53384 320 aa13.96□□□□□ -0.17
RAB3GAP1-205ENST00000489858 KIAA0556O60303 1618 aa13.96□□□□□ -0.17
RAB3GAP1-205ENST00000489858 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
RAB3GAP1-205ENST00000489858 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
RAB3GAP1-205ENST00000489858 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
RAB3GAP1-205ENST00000489858 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
RAB3GAP1-205ENST00000489858 PTPN23Q9H3S7 1636 aa13.94□□□□□ -0.18
RAB3GAP1-205ENST00000489858 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
RAB3GAP1-205ENST00000489858 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
RAB3GAP1-205ENST00000489858 MAGI3Q5TCQ9 1506 aa13.93□□□□□ -0.18
RAB3GAP1-205ENST00000489858 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
RAB3GAP1-205ENST00000489858 POTEJP0CG39 1038 aa13.92□□□□□ -0.18
RAB3GAP1-205ENST00000489858 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
RAB3GAP1-205ENST00000489858 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
RAB3GAP1-205ENST00000489858 SYNJ2O15056 1496 aa13.89□□□□□ -0.19
RAB3GAP1-205ENST00000489858 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
RAB3GAP1-205ENST00000489858 DISP1Q96F81 1524 aa13.89□□□□□ -0.19
RAB3GAP1-205ENST00000489858 HFM1A2PYH4 1435 aa13.89□□□□□ -0.19
RAB3GAP1-205ENST00000489858 GCC2Q8IWJ2 1684 aa13.88□□□□□ -0.19
RAB3GAP1-205ENST00000489858 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
RAB3GAP1-205ENST00000489858 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
RAB3GAP1-205ENST00000489858 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
RAB3GAP1-205ENST00000489858 FAM212AQ96EL1 285 aa13.86□□□□□ -0.19
RAB3GAP1-205ENST00000489858 ACIN1Q9UKV3 1341 aaKnown RBP13.86□□□□□ -0.19
RAB3GAP1-205ENST00000489858 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
RAB3GAP1-205ENST00000489858 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
RAB3GAP1-205ENST00000489858 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
RAB3GAP1-205ENST00000489858 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
RAB3GAP1-205ENST00000489858 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
RAB3GAP1-205ENST00000489858 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
RAB3GAP1-205ENST00000489858 UACAQ9BZF9 1416 aa13.82□□□□□ -0.2
RAB3GAP1-205ENST00000489858 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
RAB3GAP1-205ENST00000489858 NAIPQ13075 1403 aa13.81□□□□□ -0.2
RAB3GAP1-205ENST00000489858 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
RAB3GAP1-205ENST00000489858 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
RAB3GAP1-205ENST00000489858 NUP160Q12769 1436 aa13.81□□□□□ -0.2
RAB3GAP1-205ENST00000489858 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
RAB3GAP1-205ENST00000489858 IFNL1Q8IU54 200 aa13.78□□□□□ -0.2
RAB3GAP1-205ENST00000489858 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
RAB3GAP1-205ENST00000489858 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
RAB3GAP1-205ENST00000489858 IER5LQ5T953 404 aa13.77□□□□□ -0.21
RAB3GAP1-205ENST00000489858 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
RAB3GAP1-205ENST00000489858 DNMT1P26358 1616 aaKnown RBP13.76□□□□□ -0.21
RAB3GAP1-205ENST00000489858 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms