RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
VPS26A-206ENST00000489794 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
VPS26A-206ENST00000489794 PDE4AP27815 886 aa13.51□□□□□ -0.25
VPS26A-206ENST00000489794 BCANQ96GW7 911 aa13.51□□□□□ -0.25
VPS26A-206ENST00000489794 LCE2DQ5TA82 110 aaPredicted RBP13.5□□□□□ -0.25
VPS26A-206ENST00000489794 P3H3Q8IVL6 736 aa13.49□□□□□ -0.25
VPS26A-206ENST00000489794 PCDH10Q9P2E7 1040 aa13.49□□□□□ -0.25
VPS26A-206ENST00000489794 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
VPS26A-206ENST00000489794 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
VPS26A-206ENST00000489794 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
VPS26A-206ENST00000489794 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
VPS26A-206ENST00000489794 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-206ENST00000489794 TMEM121BQ9BXQ6 578 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-206ENST00000489794 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
VPS26A-206ENST00000489794 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
VPS26A-206ENST00000489794 NCKAP5LQ9HCH0 1330 aa13.41□□□□□ -0.26
VPS26A-206ENST00000489794 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
VPS26A-206ENST00000489794 MFSD10Q14728 455 aa13.4□□□□□ -0.26
VPS26A-206ENST00000489794 DDX27Q96GQ7 796 aaKnown RBP13.39□□□□□ -0.27
VPS26A-206ENST00000489794 NBR1Q14596 966 aa13.38□□□□□ -0.27
VPS26A-206ENST00000489794 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
VPS26A-206ENST00000489794 TMC2Q8TDI7 906 aa13.37□□□□□ -0.27
VPS26A-206ENST00000489794 E2F4Q16254 413 aa13.36□□□□□ -0.27
VPS26A-206ENST00000489794 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
VPS26A-206ENST00000489794 SNPHO15079 494 aa13.31□□□□□ -0.28
VPS26A-206ENST00000489794 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
VPS26A-206ENST00000489794 KCNV2Q8TDN2 545 aa13.3□□□□□ -0.28
VPS26A-206ENST00000489794 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
VPS26A-206ENST00000489794 FOXK1P85037 733 aa13.29□□□□□ -0.28
VPS26A-206ENST00000489794 KIF3CO14782 793 aa13.27□□□□□ -0.29
VPS26A-206ENST00000489794 CAMK2BQ13554 666 aa13.26□□□□□ -0.29
VPS26A-206ENST00000489794 C2orf72A6NCS6 295 aa13.25□□□□□ -0.29
VPS26A-206ENST00000489794 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
VPS26A-206ENST00000489794 DSG2Q14126 1118 aa13.24□□□□□ -0.29
VPS26A-206ENST00000489794 ST18O60284 1047 aa13.23□□□□□ -0.29
VPS26A-206ENST00000489794 PLPP6Q8IY26 295 aa13.19□□□□□ -0.3
VPS26A-206ENST00000489794 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
VPS26A-206ENST00000489794 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
VPS26A-206ENST00000489794 TULP1O00294 542 aaPredicted RBP13.14□□□□□ -0.31
VPS26A-206ENST00000489794 SPDYE16A6NNV3 312 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-206ENST00000489794 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
VPS26A-206ENST00000489794 SLC34A2O95436 690 aa13.06□□□□□ -0.32
VPS26A-206ENST00000489794 SMYD5Q6GMV2 418 aa13.06□□□□□ -0.32
VPS26A-206ENST00000489794 TBC1D12O60347 775 aa13.05□□□□□ -0.32
VPS26A-206ENST00000489794 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
VPS26A-206ENST00000489794 DPYSL4O14531 572 aa13.04□□□□□ -0.32
VPS26A-206ENST00000489794 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
VPS26A-206ENST00000489794 PDIA6Q15084 440 aa13.03□□□□□ -0.32
VPS26A-206ENST00000489794 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
VPS26A-206ENST00000489794 MARVELD3Q96A59 401 aa13.02□□□□□ -0.33
VPS26A-206ENST00000489794 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
VPS26A-206ENST00000489794 SEMA3EO15041 775 aa13.01□□□□□ -0.33
VPS26A-206ENST00000489794 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
VPS26A-206ENST00000489794 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
VPS26A-206ENST00000489794 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS26A-206ENST00000489794 EMP3P54852 163 aa12.98□□□□□ -0.33
VPS26A-206ENST00000489794 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
VPS26A-206ENST00000489794 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-206ENST00000489794 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
VPS26A-206ENST00000489794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
VPS26A-206ENST00000489794 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
VPS26A-206ENST00000489794 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
VPS26A-206ENST00000489794 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
VPS26A-206ENST00000489794 EVI5O60447 810 aa12.9□□□□□ -0.34
VPS26A-206ENST00000489794 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-206ENST00000489794 PTGER2P43116 358 aa12.9□□□□□ -0.34
VPS26A-206ENST00000489794 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
VPS26A-206ENST00000489794 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
VPS26A-206ENST00000489794 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-206ENST00000489794 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
VPS26A-206ENST00000489794 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-206ENST00000489794 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
VPS26A-206ENST00000489794 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
VPS26A-206ENST00000489794 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
VPS26A-206ENST00000489794 ERBB3P21860 1342 aa12.8□□□□□ -0.36
VPS26A-206ENST00000489794 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
VPS26A-206ENST00000489794 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
VPS26A-206ENST00000489794 PHF14O94880 888 aa12.78□□□□□ -0.36
VPS26A-206ENST00000489794 DDX12PQ92771 950 aa12.78□□□□□ -0.36
VPS26A-206ENST00000489794 EPAS1Q99814 870 aa12.78□□□□□ -0.36
VPS26A-206ENST00000489794 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-206ENST00000489794 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
VPS26A-206ENST00000489794 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
VPS26A-206ENST00000489794 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
VPS26A-206ENST00000489794 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
VPS26A-206ENST00000489794 OSBPP22059 807 aa12.74□□□□□ -0.37
VPS26A-206ENST00000489794 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
VPS26A-206ENST00000489794 ZC3H15Q8WU90 426 aaKnown RBP12.74□□□□□ -0.37
VPS26A-206ENST00000489794 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
VPS26A-206ENST00000489794 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-206ENST00000489794 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
VPS26A-206ENST00000489794 NUDT7P0C024 238 aa12.72□□□□□ -0.37
VPS26A-206ENST00000489794 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
VPS26A-206ENST00000489794 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
VPS26A-206ENST00000489794 KRTAP3-3Q9BYR6 98 aa12.7□□□□□ -0.38
VPS26A-206ENST00000489794 KRTAP3-2Q9BYR7 98 aa12.7□□□□□ -0.38
VPS26A-206ENST00000489794 FOSBP53539 338 aa12.68□□□□□ -0.38
VPS26A-206ENST00000489794 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
VPS26A-206ENST00000489794 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
VPS26A-206ENST00000489794 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.384e-10■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms