RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 CFAP74Q9C0B2 1584 aa17.63■□□□□ 0.41
GGA1-222ENST00000489772 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
GGA1-222ENST00000489772 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
GGA1-222ENST00000489772 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
GGA1-222ENST00000489772 KDM4FA0A1W2PPD8 638 aa17.59■□□□□ 0.41
GGA1-222ENST00000489772 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
GGA1-222ENST00000489772 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.41
GGA1-222ENST00000489772 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.4
GGA1-222ENST00000489772 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
GGA1-222ENST00000489772 FRMPD1Q5SYB0 1578 aa17.54■□□□□ 0.4
GGA1-222ENST00000489772 POGZQ7Z3K3 1410 aa17.53■□□□□ 0.4
GGA1-222ENST00000489772 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
GGA1-222ENST00000489772 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
GGA1-222ENST00000489772 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
GGA1-222ENST00000489772 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
GGA1-222ENST00000489772 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
GGA1-222ENST00000489772 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
GGA1-222ENST00000489772 RICTORQ6R327 1708 aa17.49■□□□□ 0.39
GGA1-222ENST00000489772 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
GGA1-222ENST00000489772 AFAP1Q8N556 730 aa17.49■□□□□ 0.39
GGA1-222ENST00000489772 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
GGA1-222ENST00000489772 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
GGA1-222ENST00000489772 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
GGA1-222ENST00000489772 APLP2Q06481 763 aa17.46■□□□□ 0.39
GGA1-222ENST00000489772 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
GGA1-222ENST00000489772 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
GGA1-222ENST00000489772 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
GGA1-222ENST00000489772 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
GGA1-222ENST00000489772 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
GGA1-222ENST00000489772 YEATS2Q9ULM3 1422 aa17.45■□□□□ 0.38
GGA1-222ENST00000489772 ABCC1P33527 1531 aa17.44■□□□□ 0.38
GGA1-222ENST00000489772 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
GGA1-222ENST00000489772 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
GGA1-222ENST00000489772 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
GGA1-222ENST00000489772 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
GGA1-222ENST00000489772 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
GGA1-222ENST00000489772 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
GGA1-222ENST00000489772 PLEKHH2Q8IVE3 1493 aa17.41■□□□□ 0.38
GGA1-222ENST00000489772 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
GGA1-222ENST00000489772 HNRNPMP52272 730 aaKnown RBP eCLIP17.4■□□□□ 0.38
GGA1-222ENST00000489772 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
GGA1-222ENST00000489772 ATP10AO60312 1499 aa17.4■□□□□ 0.38
GGA1-222ENST00000489772 KDM5CP41229 1560 aa17.4■□□□□ 0.38
GGA1-222ENST00000489772 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
GGA1-222ENST00000489772 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.37
GGA1-222ENST00000489772 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
GGA1-222ENST00000489772 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
GGA1-222ENST00000489772 ZNF644Q9H582 1327 aaPredicted RBP17.37■□□□□ 0.37
GGA1-222ENST00000489772 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
GGA1-222ENST00000489772 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
GGA1-222ENST00000489772 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
GGA1-222ENST00000489772 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
GGA1-222ENST00000489772 MLECQ14165 292 aa17.33■□□□□ 0.36
GGA1-222ENST00000489772 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
GGA1-222ENST00000489772 BCORL1Q5H9F3 1711 aa17.31■□□□□ 0.36
GGA1-222ENST00000489772 MBD5Q9P267 1494 aa17.31■□□□□ 0.36
GGA1-222ENST00000489772 ADAMTSL3P82987 1691 aa17.3■□□□□ 0.36
GGA1-222ENST00000489772 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
GGA1-222ENST00000489772 PTPRMP28827 1452 aa17.29■□□□□ 0.36
GGA1-222ENST00000489772 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
GGA1-222ENST00000489772 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.36
GGA1-222ENST00000489772 REREQ9P2R6 1566 aa17.27■□□□□ 0.36
GGA1-222ENST00000489772 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
GGA1-222ENST00000489772 ABCA6Q8N139 1617 aa17.26■□□□□ 0.35
GGA1-222ENST00000489772 SIGLEC1Q9BZZ2 1709 aa17.26■□□□□ 0.35
GGA1-222ENST00000489772 MADDQ8WXG6 1647 aa17.26■□□□□ 0.35
GGA1-222ENST00000489772 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
GGA1-222ENST00000489772 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
GGA1-222ENST00000489772 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
GGA1-222ENST00000489772 TSPY4P0CV99 314 aa17.25■□□□□ 0.35
GGA1-222ENST00000489772 TSPY10P0CW01 314 aa17.25■□□□□ 0.35
GGA1-222ENST00000489772 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
GGA1-222ENST00000489772 AGLP35573 1532 aa17.23■□□□□ 0.35
GGA1-222ENST00000489772 INO80Q9ULG1 1556 aaPredicted RBP17.22■□□□□ 0.35
GGA1-222ENST00000489772 ESF1Q9H501 851 aaKnown RBP17.22■□□□□ 0.35
GGA1-222ENST00000489772 A2MP01023 1474 aa17.22■□□□□ 0.35
GGA1-222ENST00000489772 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
GGA1-222ENST00000489772 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
GGA1-222ENST00000489772 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
GGA1-222ENST00000489772 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
GGA1-222ENST00000489772 PLXNC1O60486 1568 aa17.14■□□□□ 0.34
GGA1-222ENST00000489772 FER1L4A9Z1Z3 1794 aa17.14■□□□□ 0.34
GGA1-222ENST00000489772 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
GGA1-222ENST00000489772 GGT6Q6P531 493 aa17.14■□□□□ 0.33
GGA1-222ENST00000489772 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
GGA1-222ENST00000489772 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
GGA1-222ENST00000489772 ADGBQ8N7X0 1667 aa17.12■□□□□ 0.33
GGA1-222ENST00000489772 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
GGA1-222ENST00000489772 ABCC5O15440 1437 aa17.1■□□□□ 0.33
GGA1-222ENST00000489772 KIF3BO15066 747 aa17.1■□□□□ 0.33
GGA1-222ENST00000489772 FAM50AQ14320 339 aaKnown RBP17.09■□□□□ 0.33
GGA1-222ENST00000489772 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.33
GGA1-222ENST00000489772 DAPK1P53355 1430 aa17.07■□□□□ 0.32
GGA1-222ENST00000489772 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
GGA1-222ENST00000489772 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
GGA1-222ENST00000489772 ZMYM3Q14202 1370 aa17.07■□□□□ 0.32
GGA1-222ENST00000489772 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
GGA1-222ENST00000489772 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
GGA1-222ENST00000489772 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
GGA1-222ENST00000489772 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms