RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
SSR1-210ENST00000489567 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
SSR1-210ENST00000489567 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
SSR1-210ENST00000489567 CDC42BPBQ9Y5S2 1711 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
SSR1-210ENST00000489567 CDC42BPAQ5VT25 1732 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 RAPGEF3O95398 923 aa12.38□□□□□ -0.43
SSR1-210ENST00000489567 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
SSR1-210ENST00000489567 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
SSR1-210ENST00000489567 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
SSR1-210ENST00000489567 NCOA2Q15596 1464 aa12.36□□□□□ -0.43
SSR1-210ENST00000489567 CFAP74Q9C0B2 1584 aa12.36□□□□□ -0.43
SSR1-210ENST00000489567 FRMPD1Q5SYB0 1578 aa12.35□□□□□ -0.43
SSR1-210ENST00000489567 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
SSR1-210ENST00000489567 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
SSR1-210ENST00000489567 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
SSR1-210ENST00000489567 APLP2Q06481 763 aa12.34□□□□□ -0.43
SSR1-210ENST00000489567 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
SSR1-210ENST00000489567 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
SSR1-210ENST00000489567 ARHGEF12Q9NZN5 1544 aa12.33□□□□□ -0.44
SSR1-210ENST00000489567 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
SSR1-210ENST00000489567 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
SSR1-210ENST00000489567 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
SSR1-210ENST00000489567 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
SSR1-210ENST00000489567 ABCC1P33527 1531 aa12.31□□□□□ -0.44
SSR1-210ENST00000489567 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
SSR1-210ENST00000489567 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
SSR1-210ENST00000489567 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
SSR1-210ENST00000489567 TRAPPC8Q9Y2L5 1435 aa12.29□□□□□ -0.44
SSR1-210ENST00000489567 ITSN2Q9NZM3 1697 aa12.28□□□□□ -0.44
SSR1-210ENST00000489567 ZMYM4Q5VZL5 1548 aa12.27□□□□□ -0.44
SSR1-210ENST00000489567 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.44
SSR1-210ENST00000489567 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.44
SSR1-210ENST00000489567 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.45
SSR1-210ENST00000489567 YEATS2Q9ULM3 1422 aa12.27□□□□□ -0.45
SSR1-210ENST00000489567 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
SSR1-210ENST00000489567 KDM5CP41229 1560 aa12.26□□□□□ -0.45
SSR1-210ENST00000489567 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
SSR1-210ENST00000489567 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
SSR1-210ENST00000489567 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
SSR1-210ENST00000489567 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
SSR1-210ENST00000489567 MSH5O43196 834 aa12.24□□□□□ -0.45
SSR1-210ENST00000489567 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
SSR1-210ENST00000489567 PLEKHH2Q8IVE3 1493 aa12.23□□□□□ -0.45
SSR1-210ENST00000489567 ZFYVE16Q7Z3T8 1539 aa12.23□□□□□ -0.45
SSR1-210ENST00000489567 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
SSR1-210ENST00000489567 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
SSR1-210ENST00000489567 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.45
SSR1-210ENST00000489567 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
SSR1-210ENST00000489567 SIGLEC1Q9BZZ2 1709 aa12.2□□□□□ -0.46
SSR1-210ENST00000489567 KDM4FA0A1W2PPD8 638 aa12.2□□□□□ -0.46
SSR1-210ENST00000489567 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
SSR1-210ENST00000489567 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
SSR1-210ENST00000489567 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
SSR1-210ENST00000489567 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
SSR1-210ENST00000489567 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
SSR1-210ENST00000489567 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
SSR1-210ENST00000489567 PTPN23Q9H3S7 1636 aa12.18□□□□□ -0.46
SSR1-210ENST00000489567 ATP10AO60312 1499 aa12.18□□□□□ -0.46
SSR1-210ENST00000489567 CCDC141Q6ZP82 1450 aa12.17□□□□□ -0.46
SSR1-210ENST00000489567 INO80Q9ULG1 1556 aaPredicted RBP12.17□□□□□ -0.46
SSR1-210ENST00000489567 ATP7AQ04656 1500 aa12.17□□□□□ -0.46
SSR1-210ENST00000489567 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
SSR1-210ENST00000489567 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
SSR1-210ENST00000489567 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
SSR1-210ENST00000489567 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
SSR1-210ENST00000489567 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
SSR1-210ENST00000489567 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
SSR1-210ENST00000489567 ABCC5O15440 1437 aa12.13□□□□□ -0.47
SSR1-210ENST00000489567 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SSR1-210ENST00000489567 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
SSR1-210ENST00000489567 BCORL1Q5H9F3 1711 aa12.12□□□□□ -0.47
SSR1-210ENST00000489567 DAPK1P53355 1430 aa12.11□□□□□ -0.47
SSR1-210ENST00000489567 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
SSR1-210ENST00000489567 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
SSR1-210ENST00000489567 MLECQ14165 292 aa12.11□□□□□ -0.47
SSR1-210ENST00000489567 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
SSR1-210ENST00000489567 A2MP01023 1474 aa12.1□□□□□ -0.47
SSR1-210ENST00000489567 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
SSR1-210ENST00000489567 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
SSR1-210ENST00000489567 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
SSR1-210ENST00000489567 CROCC2H7BZ55 1655 aa12.09□□□□□ -0.47
SSR1-210ENST00000489567 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
SSR1-210ENST00000489567 AGLP35573 1532 aa12.09□□□□□ -0.47
SSR1-210ENST00000489567 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
SSR1-210ENST00000489567 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
SSR1-210ENST00000489567 PTPRKQ15262 1439 aa12.08□□□□□ -0.48
SSR1-210ENST00000489567 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
SSR1-210ENST00000489567 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
SSR1-210ENST00000489567 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
SSR1-210ENST00000489567 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
SSR1-210ENST00000489567 PTPRMP28827 1452 aa12.04□□□□□ -0.48
SSR1-210ENST00000489567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.04□□□□□ -0.48
SSR1-210ENST00000489567 KIF15Q9NS87 1388 aa12.04□□□□□ -0.48
SSR1-210ENST00000489567 ITGAEP38570 1179 aa12.04□□□□□ -0.48
SSR1-210ENST00000489567 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
SSR1-210ENST00000489567 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms