RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
SMIM11A-206ENST00000489469 PLCH2O75038 1416 aa24.27■■□□□ 1.48
SMIM11A-206ENST00000489469 NEO1Q92859 1461 aa24.26■■□□□ 1.47
SMIM11A-206ENST00000489469 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
SMIM11A-206ENST00000489469 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
SMIM11A-206ENST00000489469 KDM6BO15054 1643 aa24.23■■□□□ 1.47
SMIM11A-206ENST00000489469 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
SMIM11A-206ENST00000489469 FANCAO15360 1455 aa24.22■■□□□ 1.47
SMIM11A-206ENST00000489469 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
SMIM11A-206ENST00000489469 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.46
SMIM11A-206ENST00000489469 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
SMIM11A-206ENST00000489469 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
SMIM11A-206ENST00000489469 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
SMIM11A-206ENST00000489469 GPATCH8Q9UKJ3 1502 aaKnown RBP24.17■■□□□ 1.46
SMIM11A-206ENST00000489469 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
SMIM11A-206ENST00000489469 AKNAQ7Z591 1439 aa24.15■■□□□ 1.46
SMIM11A-206ENST00000489469 ADGRL1O94910 1474 aa24.1■■□□□ 1.45
SMIM11A-206ENST00000489469 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
SMIM11A-206ENST00000489469 COL17A1Q9UMD9 1497 aaPredicted RBP24.07■■□□□ 1.44
SMIM11A-206ENST00000489469 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
SMIM11A-206ENST00000489469 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
SMIM11A-206ENST00000489469 RICTORQ6R327 1708 aa24.05■■□□□ 1.44
SMIM11A-206ENST00000489469 ABCC1P33527 1531 aa24.05■■□□□ 1.44
SMIM11A-206ENST00000489469 SAMD9LQ8IVG5 1584 aa24.04■■□□□ 1.44
SMIM11A-206ENST00000489469 MYOM3Q5VTT5 1437 aa24.04■■□□□ 1.44
SMIM11A-206ENST00000489469 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
SMIM11A-206ENST00000489469 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
SMIM11A-206ENST00000489469 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
SMIM11A-206ENST00000489469 POGZQ7Z3K3 1410 aa24■■□□□ 1.43
SMIM11A-206ENST00000489469 KIAA1107Q9UPP5 1409 aa24■■□□□ 1.43
SMIM11A-206ENST00000489469 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
SMIM11A-206ENST00000489469 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
SMIM11A-206ENST00000489469 ZMYM4Q5VZL5 1548 aa23.96■■□□□ 1.43
SMIM11A-206ENST00000489469 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
SMIM11A-206ENST00000489469 RAPGEF3O95398 923 aa23.96■■□□□ 1.43
SMIM11A-206ENST00000489469 CAMSAP2Q08AD1 1489 aa23.95■■□□□ 1.42
SMIM11A-206ENST00000489469 KDM5CP41229 1560 aa23.94■■□□□ 1.42
SMIM11A-206ENST00000489469 ARHGEF12Q9NZN5 1544 aa23.93■■□□□ 1.42
SMIM11A-206ENST00000489469 MAGI2Q86UL8 1455 aa23.93■■□□□ 1.42
SMIM11A-206ENST00000489469 FGD6Q6ZV73 1430 aa23.92■■□□□ 1.42
SMIM11A-206ENST00000489469 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
SMIM11A-206ENST00000489469 RSPH4AQ5TD94 716 aa23.9■■□□□ 1.42
SMIM11A-206ENST00000489469 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
SMIM11A-206ENST00000489469 TRAPPC8Q9Y2L5 1435 aa23.89■■□□□ 1.41
SMIM11A-206ENST00000489469 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.41
SMIM11A-206ENST00000489469 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
SMIM11A-206ENST00000489469 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
SMIM11A-206ENST00000489469 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
SMIM11A-206ENST00000489469 TCOF1Q13428 1488 aaKnown RBP23.87■■□□□ 1.41
SMIM11A-206ENST00000489469 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
SMIM11A-206ENST00000489469 MLH3Q9UHC1 1453 aa23.86■■□□□ 1.41
SMIM11A-206ENST00000489469 ZFYVE16Q7Z3T8 1539 aa23.85■■□□□ 1.41
SMIM11A-206ENST00000489469 ARHGEF40Q8TER5 1519 aa23.85■■□□□ 1.41
SMIM11A-206ENST00000489469 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
SMIM11A-206ENST00000489469 CCDC141Q6ZP82 1450 aa23.85■■□□□ 1.41
SMIM11A-206ENST00000489469 SPAG9O60271 1321 aaKnown RBP23.81■■□□□ 1.4
SMIM11A-206ENST00000489469 KIDINS220Q9ULH0 1771 aa23.8■■□□□ 1.4
SMIM11A-206ENST00000489469 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
SMIM11A-206ENST00000489469 MYT1LQ9UL68 1186 aa23.79■■□□□ 1.4
SMIM11A-206ENST00000489469 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
SMIM11A-206ENST00000489469 DNMT1P26358 1616 aaKnown RBP23.77■■□□□ 1.4
SMIM11A-206ENST00000489469 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
SMIM11A-206ENST00000489469 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
SMIM11A-206ENST00000489469 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
SMIM11A-206ENST00000489469 TSPY4P0CV99 314 aa23.76■■□□□ 1.39
SMIM11A-206ENST00000489469 TSPY10P0CW01 314 aa23.76■■□□□ 1.39
SMIM11A-206ENST00000489469 DIP2CQ9Y2E4 1556 aa23.75■■□□□ 1.39
SMIM11A-206ENST00000489469 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
SMIM11A-206ENST00000489469 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
SMIM11A-206ENST00000489469 ATP10AO60312 1499 aa23.75■■□□□ 1.39
SMIM11A-206ENST00000489469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.74■■□□□ 1.39
SMIM11A-206ENST00000489469 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
SMIM11A-206ENST00000489469 SHANK2Q9UPX8 1470 aa23.73■■□□□ 1.39
SMIM11A-206ENST00000489469 REREQ9P2R6 1566 aa23.73■■□□□ 1.39
SMIM11A-206ENST00000489469 ADGBQ8N7X0 1667 aa23.73■■□□□ 1.39
SMIM11A-206ENST00000489469 C9orf84Q5VXU9 1444 aa23.72■■□□□ 1.39
SMIM11A-206ENST00000489469 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
SMIM11A-206ENST00000489469 DAPK1P53355 1430 aa23.71■■□□□ 1.39
SMIM11A-206ENST00000489469 ABCC5O15440 1437 aa23.69■■□□□ 1.38
SMIM11A-206ENST00000489469 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
SMIM11A-206ENST00000489469 AGLP35573 1532 aa23.64■■□□□ 1.37
SMIM11A-206ENST00000489469 A2MP01023 1474 aa23.63■■□□□ 1.37
SMIM11A-206ENST00000489469 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
SMIM11A-206ENST00000489469 SIGLEC1Q9BZZ2 1709 aa23.61■■□□□ 1.37
SMIM11A-206ENST00000489469 BCORL1Q5H9F3 1711 aa23.6■■□□□ 1.37
SMIM11A-206ENST00000489469 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
SMIM11A-206ENST00000489469 ADGRL2O95490 1459 aa23.59■■□□□ 1.37
SMIM11A-206ENST00000489469 DHX29Q7Z478 1369 aaKnown RBP23.57■■□□□ 1.36
SMIM11A-206ENST00000489469 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
SMIM11A-206ENST00000489469 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
SMIM11A-206ENST00000489469 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
SMIM11A-206ENST00000489469 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
SMIM11A-206ENST00000489469 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
SMIM11A-206ENST00000489469 ADAMTSL3P82987 1691 aa23.53■■□□□ 1.36
SMIM11A-206ENST00000489469 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
SMIM11A-206ENST00000489469 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
SMIM11A-206ENST00000489469 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
SMIM11A-206ENST00000489469 ITGAEP38570 1179 aa23.49■■□□□ 1.35
SMIM11A-206ENST00000489469 FER1L4A9Z1Z3 1794 aa23.49■■□□□ 1.35
SMIM11A-206ENST00000489469 RRP7BPQ9NSQ0 103 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms