RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
LINC00173-204ENST00000489452 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.09
LINC00173-204ENST00000489452 AFAP1Q8N556 730 aa21.83■■□□□ 1.09
LINC00173-204ENST00000489452 TROQ12816 1431 aaPredicted RBP21.82■■□□□ 1.08
LINC00173-204ENST00000489452 MAGI2Q86UL8 1455 aa21.81■■□□□ 1.08
LINC00173-204ENST00000489452 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
LINC00173-204ENST00000489452 KIF14Q15058 1648 aa21.8■■□□□ 1.08
LINC00173-204ENST00000489452 CLIP1P30622 1438 aa21.8■■□□□ 1.08
LINC00173-204ENST00000489452 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
LINC00173-204ENST00000489452 HSPA2P54652 639 aa21.78■■□□□ 1.08
LINC00173-204ENST00000489452 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
LINC00173-204ENST00000489452 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
LINC00173-204ENST00000489452 ATP10AO60312 1499 aa21.76■■□□□ 1.07
LINC00173-204ENST00000489452 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
LINC00173-204ENST00000489452 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
LINC00173-204ENST00000489452 LRRIQ1Q96JM4 1722 aa21.73■■□□□ 1.07
LINC00173-204ENST00000489452 PCF11O94913 1555 aaKnown RBP21.73■■□□□ 1.07
LINC00173-204ENST00000489452 LMTK3Q96Q04 1460 aa21.72■■□□□ 1.07
LINC00173-204ENST00000489452 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
LINC00173-204ENST00000489452 C9orf84Q5VXU9 1444 aa21.7■■□□□ 1.06
LINC00173-204ENST00000489452 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
LINC00173-204ENST00000489452 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
LINC00173-204ENST00000489452 CCDC18Q5T9S5 1454 aa21.67■■□□□ 1.06
LINC00173-204ENST00000489452 FBXO41Q8TF61 875 aa21.67■■□□□ 1.06
LINC00173-204ENST00000489452 TRAPPC8Q9Y2L5 1435 aa21.64■■□□□ 1.06
LINC00173-204ENST00000489452 CDC42BPBQ9Y5S2 1711 aa21.63■■□□□ 1.05
LINC00173-204ENST00000489452 FER1L4A9Z1Z3 1794 aa21.63■■□□□ 1.05
LINC00173-204ENST00000489452 ARHGEF12Q9NZN5 1544 aa21.62■■□□□ 1.05
LINC00173-204ENST00000489452 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
LINC00173-204ENST00000489452 HNRNPMP52272 730 aaKnown RBP eCLIP21.6■■□□□ 1.05
LINC00173-204ENST00000489452 KDM5CP41229 1560 aa21.6■■□□□ 1.05
LINC00173-204ENST00000489452 ESF1Q9H501 851 aaKnown RBP21.59■■□□□ 1.05
LINC00173-204ENST00000489452 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.04
LINC00173-204ENST00000489452 PREX2Q70Z35 1606 aa21.57■■□□□ 1.04
LINC00173-204ENST00000489452 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
LINC00173-204ENST00000489452 ABCC1P33527 1531 aa21.55■■□□□ 1.04
LINC00173-204ENST00000489452 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
LINC00173-204ENST00000489452 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
LINC00173-204ENST00000489452 SPAG9O60271 1321 aaKnown RBP21.53■■□□□ 1.04
LINC00173-204ENST00000489452 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.04
LINC00173-204ENST00000489452 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
LINC00173-204ENST00000489452 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
LINC00173-204ENST00000489452 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
LINC00173-204ENST00000489452 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
LINC00173-204ENST00000489452 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
LINC00173-204ENST00000489452 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
LINC00173-204ENST00000489452 KIDINS220Q9ULH0 1771 aa21.46■■□□□ 1.03
LINC00173-204ENST00000489452 SYCP2Q9BX26 1530 aa21.46■■□□□ 1.03
LINC00173-204ENST00000489452 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
LINC00173-204ENST00000489452 REREQ9P2R6 1566 aa21.46■■□□□ 1.03
LINC00173-204ENST00000489452 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
LINC00173-204ENST00000489452 AGLP35573 1532 aa21.45■■□□□ 1.02
LINC00173-204ENST00000489452 SETD1BQ9UPS6 1966 aaKnown RBP21.44■■□□□ 1.02
LINC00173-204ENST00000489452 PREX1Q8TCU6 1659 aa21.44■■□□□ 1.02
LINC00173-204ENST00000489452 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
LINC00173-204ENST00000489452 KIAA1107Q9UPP5 1409 aa21.41■■□□□ 1.02
LINC00173-204ENST00000489452 GGT6Q6P531 493 aa21.41■■□□□ 1.02
LINC00173-204ENST00000489452 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
LINC00173-204ENST00000489452 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
LINC00173-204ENST00000489452 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
LINC00173-204ENST00000489452 C3P01024 1663 aa21.39■■□□□ 1.01
LINC00173-204ENST00000489452 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
LINC00173-204ENST00000489452 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
LINC00173-204ENST00000489452 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
LINC00173-204ENST00000489452 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
LINC00173-204ENST00000489452 A2MP01023 1474 aa21.34■■□□□ 1.01
LINC00173-204ENST00000489452 STRCQ7RTU9 1775 aa21.34■■□□□ 1.01
LINC00173-204ENST00000489452 TIAM1Q13009 1591 aa21.31■■□□□ 1
LINC00173-204ENST00000489452 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
LINC00173-204ENST00000489452 INO80Q9ULG1 1556 aaPredicted RBP21.28■■□□□ 1
LINC00173-204ENST00000489452 MBD5Q9P267 1494 aa21.28■■□□□ 1
LINC00173-204ENST00000489452 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
LINC00173-204ENST00000489452 PTPRTO14522 1441 aa21.26■□□□□ 0.99
LINC00173-204ENST00000489452 NPATQ14207 1427 aa21.26■□□□□ 0.99
LINC00173-204ENST00000489452 KIF3BO15066 747 aa21.25■□□□□ 0.99
LINC00173-204ENST00000489452 NCOA2Q15596 1464 aa21.25■□□□□ 0.99
LINC00173-204ENST00000489452 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
LINC00173-204ENST00000489452 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
LINC00173-204ENST00000489452 DHX29Q7Z478 1369 aaKnown RBP21.23■□□□□ 0.99
LINC00173-204ENST00000489452 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
LINC00173-204ENST00000489452 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
LINC00173-204ENST00000489452 MROH2AA6NES4 1674 aa21.21■□□□□ 0.99
LINC00173-204ENST00000489452 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
LINC00173-204ENST00000489452 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
LINC00173-204ENST00000489452 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
LINC00173-204ENST00000489452 CAMSAP1Q5T5Y3 1602 aa21.21■□□□□ 0.99
LINC00173-204ENST00000489452 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
LINC00173-204ENST00000489452 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
LINC00173-204ENST00000489452 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
LINC00173-204ENST00000489452 CAMSAP2Q08AD1 1489 aa21.19■□□□□ 0.98
LINC00173-204ENST00000489452 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
LINC00173-204ENST00000489452 KANK4Q5T7N3 995 aaPredicted RBP21.18■□□□□ 0.98
LINC00173-204ENST00000489452 CCDC141Q6ZP82 1450 aa21.17■□□□□ 0.98
LINC00173-204ENST00000489452 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
LINC00173-204ENST00000489452 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
LINC00173-204ENST00000489452 PKD2Q13563 968 aa21.14■□□□□ 0.97
LINC00173-204ENST00000489452 ZNF335Q9H4Z2 1342 aaPredicted RBP21.13■□□□□ 0.97
LINC00173-204ENST00000489452 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
LINC00173-204ENST00000489452 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
LINC00173-204ENST00000489452 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms