RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 ZMYM4Q5VZL5 1548 aa30.37■■■□□ 2.45
MRPL55-230ENST00000489430 POGZQ7Z3K3 1410 aa30.37■■■□□ 2.45
MRPL55-230ENST00000489430 ARHGAP5Q13017 1502 aa30.37■■■□□ 2.45
MRPL55-230ENST00000489430 MTUS2Q5JR59 1369 aa30.31■■■□□ 2.44
MRPL55-230ENST00000489430 ARHGEF40Q8TER5 1519 aa30.31■■■□□ 2.44
MRPL55-230ENST00000489430 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
MRPL55-230ENST00000489430 ZNF518AQ6AHZ1 1483 aa30.28■■■□□ 2.44
MRPL55-230ENST00000489430 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
MRPL55-230ENST00000489430 ZFYVE16Q7Z3T8 1539 aa30.25■■■□□ 2.43
MRPL55-230ENST00000489430 CDC42BPBQ9Y5S2 1711 aa30.24■■■□□ 2.43
MRPL55-230ENST00000489430 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
MRPL55-230ENST00000489430 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
MRPL55-230ENST00000489430 YEATS2Q9ULM3 1422 aa30.21■■■□□ 2.43
MRPL55-230ENST00000489430 ARID4BQ4LE39 1312 aaPredicted RBP30.2■■■□□ 2.42
MRPL55-230ENST00000489430 KDM5CP41229 1560 aa30.2■■■□□ 2.42
MRPL55-230ENST00000489430 CCNB3Q8WWL7 1395 aa30.19■■■□□ 2.42
MRPL55-230ENST00000489430 ABCC1P33527 1531 aa30.18■■■□□ 2.42
MRPL55-230ENST00000489430 AFAP1Q8N556 730 aa30.18■■■□□ 2.42
MRPL55-230ENST00000489430 CDC42BPAQ5VT25 1732 aa30.18■■■□□ 2.42
MRPL55-230ENST00000489430 CFDP1Q9UEE9 299 aaPredicted RBP30.16■■■□□ 2.42
MRPL55-230ENST00000489430 ATP10AO60312 1499 aa30.15■■■□□ 2.42
MRPL55-230ENST00000489430 MLH3Q9UHC1 1453 aa30.14■■■□□ 2.42
MRPL55-230ENST00000489430 KIAA1107Q9UPP5 1409 aa30.13■■■□□ 2.41
MRPL55-230ENST00000489430 PLEKHH2Q8IVE3 1493 aa30.13■■■□□ 2.41
MRPL55-230ENST00000489430 ADAMTSL3P82987 1691 aa30.13■■■□□ 2.41
MRPL55-230ENST00000489430 ARHGEF12Q9NZN5 1544 aa30.12■■■□□ 2.41
MRPL55-230ENST00000489430 C9orf84Q5VXU9 1444 aa30.11■■■□□ 2.41
MRPL55-230ENST00000489430 TRAPPC8Q9Y2L5 1435 aa30.11■■■□□ 2.41
MRPL55-230ENST00000489430 MAP3K1Q13233 1512 aa30.1■■■□□ 2.41
MRPL55-230ENST00000489430 TIAM1Q13009 1591 aa30.1■■■□□ 2.41
MRPL55-230ENST00000489430 BCORL1Q5H9F3 1711 aa30.1■■■□□ 2.41
MRPL55-230ENST00000489430 ZNF777Q9ULD5 760 aaPredicted RBP30.09■■■□□ 2.41
MRPL55-230ENST00000489430 HECW2Q9P2P5 1572 aa30.08■■■□□ 2.41
MRPL55-230ENST00000489430 SAMD9LQ8IVG5 1584 aa30.07■■■□□ 2.4
MRPL55-230ENST00000489430 ITSN2Q9NZM3 1697 aa30.06■■■□□ 2.4
MRPL55-230ENST00000489430 MYT1LQ9UL68 1186 aa30.04■■■□□ 2.4
MRPL55-230ENST00000489430 PTPRMP28827 1452 aa30.04■■■□□ 2.4
MRPL55-230ENST00000489430 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
MRPL55-230ENST00000489430 LRRC9Q6ZRR7 1453 aa30.02■■■□□ 2.4
MRPL55-230ENST00000489430 REREQ9P2R6 1566 aa30.02■■■□□ 2.4
MRPL55-230ENST00000489430 SYCP2Q9BX26 1530 aa30.01■■■□□ 2.39
MRPL55-230ENST00000489430 SUPT6HQ7KZ85 1726 aaKnown RBP29.99■■■□□ 2.39
MRPL55-230ENST00000489430 HNRNPMP52272 730 aaKnown RBP eCLIP29.99■■■□□ 2.39
MRPL55-230ENST00000489430 DIP2CQ9Y2E4 1556 aa29.98■■■□□ 2.39
MRPL55-230ENST00000489430 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
MRPL55-230ENST00000489430 MADDQ8WXG6 1647 aa29.97■■■□□ 2.39
MRPL55-230ENST00000489430 SIGLEC1Q9BZZ2 1709 aa29.95■■■□□ 2.38
MRPL55-230ENST00000489430 AGLP35573 1532 aa29.93■■■□□ 2.38
MRPL55-230ENST00000489430 RSPH4AQ5TD94 716 aa29.92■■■□□ 2.38
MRPL55-230ENST00000489430 ABCA6Q8N139 1617 aa29.92■■■□□ 2.38
MRPL55-230ENST00000489430 MBD5Q9P267 1494 aa29.92■■■□□ 2.38
MRPL55-230ENST00000489430 APLP2Q06481 763 aa29.91■■■□□ 2.38
MRPL55-230ENST00000489430 ZNF644Q9H582 1327 aaPredicted RBP29.91■■■□□ 2.38
MRPL55-230ENST00000489430 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
MRPL55-230ENST00000489430 MLECQ14165 292 aa29.9■■■□□ 2.38
MRPL55-230ENST00000489430 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.38
MRPL55-230ENST00000489430 ATP7AQ04656 1500 aa29.86■■■□□ 2.37
MRPL55-230ENST00000489430 RTEL1-TNFRSF6BF6WH68 1400 aa29.85■■■□□ 2.37
MRPL55-230ENST00000489430 RIMS1Q86UR5 1692 aaKnown RBP29.83■■■□□ 2.37
MRPL55-230ENST00000489430 INO80Q9ULG1 1556 aaPredicted RBP29.83■■■□□ 2.37
MRPL55-230ENST00000489430 CAMSAP2Q08AD1 1489 aa29.82■■■□□ 2.36
MRPL55-230ENST00000489430 MIA2Q96PC5 1412 aa29.81■■■□□ 2.36
MRPL55-230ENST00000489430 CCDC141Q6ZP82 1450 aa29.79■■■□□ 2.36
MRPL55-230ENST00000489430 MYOM3Q5VTT5 1437 aa29.78■■■□□ 2.36
MRPL55-230ENST00000489430 FER1L4A9Z1Z3 1794 aa29.77■■■□□ 2.36
MRPL55-230ENST00000489430 A2MP01023 1474 aa29.76■■■□□ 2.35
MRPL55-230ENST00000489430 ARHGEF5Q12774 1597 aa29.74■■■□□ 2.35
MRPL55-230ENST00000489430 PLXNC1O60486 1568 aa29.73■■■□□ 2.35
MRPL55-230ENST00000489430 CNTLNQ9NXG0 1405 aa29.73■■■□□ 2.35
MRPL55-230ENST00000489430 ESF1Q9H501 851 aaKnown RBP29.73■■■□□ 2.35
MRPL55-230ENST00000489430 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
MRPL55-230ENST00000489430 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
MRPL55-230ENST00000489430 PPP6R1Q9UPN7 881 aa29.69■■■□□ 2.34
MRPL55-230ENST00000489430 DHX29Q7Z478 1369 aaKnown RBP29.68■■■□□ 2.34
MRPL55-230ENST00000489430 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
MRPL55-230ENST00000489430 ADGBQ8N7X0 1667 aa29.67■■■□□ 2.34
MRPL55-230ENST00000489430 PLPPR3Q6T4P5 718 aa29.63■■■□□ 2.33
MRPL55-230ENST00000489430 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
MRPL55-230ENST00000489430 MAST1Q9Y2H9 1570 aa29.58■■■□□ 2.33
MRPL55-230ENST00000489430 FGD6Q6ZV73 1430 aa29.56■■■□□ 2.32
MRPL55-230ENST00000489430 GGT6Q6P531 493 aa29.56■■■□□ 2.32
MRPL55-230ENST00000489430 ZMYM3Q14202 1370 aa29.54■■■□□ 2.32
MRPL55-230ENST00000489430 TCOF1Q13428 1488 aaKnown RBP29.53■■■□□ 2.32
MRPL55-230ENST00000489430 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
MRPL55-230ENST00000489430 NPATQ14207 1427 aa29.52■■■□□ 2.32
MRPL55-230ENST00000489430 C3P01024 1663 aa29.51■■■□□ 2.31
MRPL55-230ENST00000489430 KIF3BO15066 747 aa29.51■■■□□ 2.31
MRPL55-230ENST00000489430 PTPN23Q9H3S7 1636 aa29.51■■■□□ 2.31
MRPL55-230ENST00000489430 UHRF1BP1Q6BDS2 1440 aa29.51■■■□□ 2.31
MRPL55-230ENST00000489430 FAM135AQ9P2D6 1515 aa29.5■■■□□ 2.31
MRPL55-230ENST00000489430 SHANK2Q9UPX8 1470 aa29.5■■■□□ 2.31
MRPL55-230ENST00000489430 SETD1BQ9UPS6 1966 aaKnown RBP29.5■■■□□ 2.31
MRPL55-230ENST00000489430 PREX1Q8TCU6 1659 aa29.49■■■□□ 2.31
MRPL55-230ENST00000489430 ABCC5O15440 1437 aa29.47■■■□□ 2.31
MRPL55-230ENST00000489430 HSPA2P54652 639 aa29.46■■■□□ 2.31
MRPL55-230ENST00000489430 DAPK1P53355 1430 aa29.43■■■□□ 2.3
MRPL55-230ENST00000489430 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
MRPL55-230ENST00000489430 DUOX2Q9NRD8 1548 aa29.4■■■□□ 2.3
MRPL55-230ENST00000489430 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
MRPL55-230ENST00000489430 KDM5DQ9BY66 1539 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms