RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 PLCH2O75038 1416 aa27.81■■■□□ 2.04
C9orf16-203ENST00000489240 CFDP1Q9UEE9 299 aaPredicted RBP27.8■■■□□ 2.04
C9orf16-203ENST00000489240 ARHGAP5Q13017 1502 aa27.79■■■□□ 2.04
C9orf16-203ENST00000489240 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
C9orf16-203ENST00000489240 CD109Q6YHK3 1445 aa27.76■■■□□ 2.04
C9orf16-203ENST00000489240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.03
C9orf16-203ENST00000489240 FAM69CQ0P6D2 419 aa27.75■■■□□ 2.03
C9orf16-203ENST00000489240 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
C9orf16-203ENST00000489240 CAMSAP2Q08AD1 1489 aa27.72■■■□□ 2.03
C9orf16-203ENST00000489240 FAM50AQ14320 339 aaKnown RBP27.72■■■□□ 2.03
C9orf16-203ENST00000489240 EFCAB2Q5VUJ9 269 aa27.71■■■□□ 2.03
C9orf16-203ENST00000489240 SAMD9LQ8IVG5 1584 aa27.71■■■□□ 2.03
C9orf16-203ENST00000489240 TSPOAP1O95153 1857 aa27.7■■■□□ 2.03
C9orf16-203ENST00000489240 ZNF777Q9ULD5 760 aaPredicted RBP27.7■■■□□ 2.02
C9orf16-203ENST00000489240 FANCAO15360 1455 aa27.68■■■□□ 2.02
C9orf16-203ENST00000489240 PLEKHH2Q8IVE3 1493 aa27.67■■■□□ 2.02
C9orf16-203ENST00000489240 PPRC1Q5VV67 1664 aaKnown RBP27.64■■■□□ 2.02
C9orf16-203ENST00000489240 ZNF644Q9H582 1327 aaPredicted RBP27.64■■■□□ 2.01
C9orf16-203ENST00000489240 DNMT1P26358 1616 aaKnown RBP27.63■■■□□ 2.01
C9orf16-203ENST00000489240 NEO1Q92859 1461 aa27.61■■■□□ 2.01
C9orf16-203ENST00000489240 ABCC1P33527 1531 aa27.61■■■□□ 2.01
C9orf16-203ENST00000489240 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
C9orf16-203ENST00000489240 TEX14Q8IWB6 1497 aa27.6■■■□□ 2.01
C9orf16-203ENST00000489240 KIAA1107Q9UPP5 1409 aa27.59■■■□□ 2.01
C9orf16-203ENST00000489240 CROCC2H7BZ55 1655 aa27.59■■■□□ 2.01
C9orf16-203ENST00000489240 PCGF6Q9BYE7 350 aa27.59■■■□□ 2.01
C9orf16-203ENST00000489240 SYCP2Q9BX26 1530 aa27.58■■■□□ 2.01
C9orf16-203ENST00000489240 AKNAQ7Z591 1439 aa27.58■■■□□ 2
C9orf16-203ENST00000489240 ADGRL1O94910 1474 aa27.55■■■□□ 2
C9orf16-203ENST00000489240 TRHP20396 242 aaPredicted RBP27.54■■■□□ 2
C9orf16-203ENST00000489240 DAPK1P53355 1430 aa27.54■■■□□ 2
C9orf16-203ENST00000489240 RSPH4AQ5TD94 716 aa27.54■■■□□ 2
C9orf16-203ENST00000489240 MBD5Q9P267 1494 aa27.53■■■□□ 2
C9orf16-203ENST00000489240 ITGAEP38570 1179 aa27.53■■■□□ 2
C9orf16-203ENST00000489240 HNRNPMP52272 730 aaKnown RBP eCLIP27.52■■■□□ 2
C9orf16-203ENST00000489240 CCDC141Q6ZP82 1450 aa27.51■■■□□ 2
C9orf16-203ENST00000489240 ABCC5O15440 1437 aa27.5■■□□□ 1.99
C9orf16-203ENST00000489240 ADGBQ8N7X0 1667 aa27.5■■□□□ 1.99
C9orf16-203ENST00000489240 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
C9orf16-203ENST00000489240 SCAPERQ9BY12 1400 aa27.49■■□□□ 1.99
C9orf16-203ENST00000489240 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
C9orf16-203ENST00000489240 MAST1Q9Y2H9 1570 aa27.44■■□□□ 1.98
C9orf16-203ENST00000489240 PTPRKQ15262 1439 aa27.44■■□□□ 1.98
C9orf16-203ENST00000489240 TSPY4P0CV99 314 aa27.43■■□□□ 1.98
C9orf16-203ENST00000489240 TSPY10P0CW01 314 aa27.43■■□□□ 1.98
C9orf16-203ENST00000489240 TRAPPC8Q9Y2L5 1435 aa27.42■■□□□ 1.98
C9orf16-203ENST00000489240 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
C9orf16-203ENST00000489240 DENND4BO75064 1496 aaPredicted RBP27.41■■□□□ 1.98
C9orf16-203ENST00000489240 ZNF518AQ6AHZ1 1483 aa27.41■■□□□ 1.98
C9orf16-203ENST00000489240 C9orf84Q5VXU9 1444 aa27.4■■□□□ 1.98
C9orf16-203ENST00000489240 POGZQ7Z3K3 1410 aa27.39■■□□□ 1.97
C9orf16-203ENST00000489240 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
C9orf16-203ENST00000489240 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
C9orf16-203ENST00000489240 KDM5CP41229 1560 aa27.37■■□□□ 1.97
C9orf16-203ENST00000489240 CHIC2Q9UKJ5 165 aa27.37■■□□□ 1.97
C9orf16-203ENST00000489240 GCC2Q8IWJ2 1684 aa27.36■■□□□ 1.97
C9orf16-203ENST00000489240 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
C9orf16-203ENST00000489240 INO80Q9ULG1 1556 aaPredicted RBP27.35■■□□□ 1.97
C9orf16-203ENST00000489240 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
C9orf16-203ENST00000489240 ANKRD30AQ9BXX3 1397 aa27.34■■□□□ 1.97
C9orf16-203ENST00000489240 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.97
C9orf16-203ENST00000489240 FRMPD1Q5SYB0 1578 aa27.32■■□□□ 1.96
C9orf16-203ENST00000489240 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
C9orf16-203ENST00000489240 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
C9orf16-203ENST00000489240 HECW2Q9P2P5 1572 aa27.31■■□□□ 1.96
C9orf16-203ENST00000489240 HFM1A2PYH4 1435 aa27.31■■□□□ 1.96
C9orf16-203ENST00000489240 ZFYVE16Q7Z3T8 1539 aa27.31■■□□□ 1.96
C9orf16-203ENST00000489240 NCOA1Q15788 1441 aa27.3■■□□□ 1.96
C9orf16-203ENST00000489240 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
C9orf16-203ENST00000489240 ZMYM4Q5VZL5 1548 aa27.27■■□□□ 1.96
C9orf16-203ENST00000489240 MLH3Q9UHC1 1453 aa27.27■■□□□ 1.96
C9orf16-203ENST00000489240 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
C9orf16-203ENST00000489240 RAPGEF3O95398 923 aa27.27■■□□□ 1.96
C9orf16-203ENST00000489240 NAIPQ13075 1403 aa27.26■■□□□ 1.95
C9orf16-203ENST00000489240 RRP7BPQ9NSQ0 103 aa27.26■■□□□ 1.95
C9orf16-203ENST00000489240 KDM6BO15054 1643 aa27.24■■□□□ 1.95
C9orf16-203ENST00000489240 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
C9orf16-203ENST00000489240 COL17A1Q9UMD9 1497 aaPredicted RBP27.22■■□□□ 1.95
C9orf16-203ENST00000489240 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
C9orf16-203ENST00000489240 DUOX2Q9NRD8 1548 aa27.21■■□□□ 1.95
C9orf16-203ENST00000489240 MAGI2Q86UL8 1455 aa27.2■■□□□ 1.95
C9orf16-203ENST00000489240 ABCA6Q8N139 1617 aa27.18■■□□□ 1.94
C9orf16-203ENST00000489240 RAB3GAP2Q9H2M9 1393 aa27.17■■□□□ 1.94
C9orf16-203ENST00000489240 HRCP23327 699 aa27.15■■□□□ 1.94
C9orf16-203ENST00000489240 DIP2CQ9Y2E4 1556 aa27.14■■□□□ 1.94
C9orf16-203ENST00000489240 ANKRD50Q9ULJ7 1429 aa27.14■■□□□ 1.93
C9orf16-203ENST00000489240 ACIN1Q9UKV3 1341 aaKnown RBP27.13■■□□□ 1.93
C9orf16-203ENST00000489240 ERBINQ96RT1 1412 aa27.11■■□□□ 1.93
C9orf16-203ENST00000489240 EIF2AK4Q9P2K8 1649 aaKnown RBP27.1■■□□□ 1.93
C9orf16-203ENST00000489240 A2MP01023 1474 aa27.09■■□□□ 1.93
C9orf16-203ENST00000489240 ARHGEF40Q8TER5 1519 aa27.08■■□□□ 1.93
C9orf16-203ENST00000489240 DHX29Q7Z478 1369 aaKnown RBP27.08■■□□□ 1.93
C9orf16-203ENST00000489240 YEATS2Q9ULM3 1422 aa27.07■■□□□ 1.92
C9orf16-203ENST00000489240 ATP10AO60312 1499 aa27.05■■□□□ 1.92
C9orf16-203ENST00000489240 REREQ9P2R6 1566 aa27.05■■□□□ 1.92
C9orf16-203ENST00000489240 BCORL1Q5H9F3 1711 aa27.04■■□□□ 1.92
C9orf16-203ENST00000489240 UNC13BO14795 1591 aa27.01■■□□□ 1.92
C9orf16-203ENST00000489240 DEPDC5O75140 1603 aa26.99■■□□□ 1.91
C9orf16-203ENST00000489240 TRIM52Q96A61 297 aa26.96■■□□□ 1.91
C9orf16-203ENST00000489240 RNF17Q9BXT8 1623 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms