RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 HOXB1P14653 301 aaPredicted RBP9.45□□□□□ -0.9
KDM3A-213ENST00000488971 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
KDM3A-213ENST00000488971 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
KDM3A-213ENST00000488971 RGL2O15211 777 aa9.44□□□□□ -0.9
KDM3A-213ENST00000488971 PKD2Q13563 968 aa9.44□□□□□ -0.9
KDM3A-213ENST00000488971 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
KDM3A-213ENST00000488971 ERBB3P21860 1342 aa9.43□□□□□ -0.9
KDM3A-213ENST00000488971 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
KDM3A-213ENST00000488971 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
KDM3A-213ENST00000488971 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
KDM3A-213ENST00000488971 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
KDM3A-213ENST00000488971 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
KDM3A-213ENST00000488971 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
KDM3A-213ENST00000488971 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
KDM3A-213ENST00000488971 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
KDM3A-213ENST00000488971 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
KDM3A-213ENST00000488971 C2orf72A6NCS6 295 aa9.3□□□□□ -0.92
KDM3A-213ENST00000488971 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
KDM3A-213ENST00000488971 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.932e-8■■□□□ 14.4
KDM3A-213ENST00000488971 KIF3CO14782 793 aa9.26□□□□□ -0.93
KDM3A-213ENST00000488971 PPP1R37O75864 691 aa9.26□□□□□ -0.93
KDM3A-213ENST00000488971 ZNF687Q8N1G0 1237 aa9.26□□□□□ -0.93
KDM3A-213ENST00000488971 ZNF316A6NFI3 1004 aaPredicted RBP9.24□□□□□ -0.93
KDM3A-213ENST00000488971 HS6ST3Q8IZP7 471 aa9.23□□□□□ -0.93
KDM3A-213ENST00000488971 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
KDM3A-213ENST00000488971 NUDT7P0C024 238 aa9.21□□□□□ -0.94
KDM3A-213ENST00000488971 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
KDM3A-213ENST00000488971 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
KDM3A-213ENST00000488971 SLC34A2O95436 690 aa9.18□□□□□ -0.94
KDM3A-213ENST00000488971 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
KDM3A-213ENST00000488971 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
KDM3A-213ENST00000488971 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
KDM3A-213ENST00000488971 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
KDM3A-213ENST00000488971 PTGER2P43116 358 aa9.12□□□□□ -0.95
KDM3A-213ENST00000488971 LSM11P83369 360 aaKnown RBP eCLIP9.12□□□□□ -0.95
KDM3A-213ENST00000488971 PBX2P40425 430 aa9.11□□□□□ -0.95
KDM3A-213ENST00000488971 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
KDM3A-213ENST00000488971 RYDENQ9NUL5 291 aaKnown RBP9.11□□□□□ -0.95
KDM3A-213ENST00000488971 FOXK1P85037 733 aa9.1□□□□□ -0.95
KDM3A-213ENST00000488971 NKX1-1Q15270 411 aaPredicted RBP9.09□□□□□ -0.95
KDM3A-213ENST00000488971 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
KDM3A-213ENST00000488971 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
KDM3A-213ENST00000488971 TBC1D12O60347 775 aa9.08□□□□□ -0.96
KDM3A-213ENST00000488971 PLCB2Q00722 1185 aa9.08□□□□□ -0.96
KDM3A-213ENST00000488971 DSG2Q14126 1118 aa9.08□□□□□ -0.96
KDM3A-213ENST00000488971 PTCD2Q8WV60 388 aaKnown RBP9.08□□□□□ -0.96
KDM3A-213ENST00000488971 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
KDM3A-213ENST00000488971 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
KDM3A-213ENST00000488971 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
KDM3A-213ENST00000488971 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
KDM3A-213ENST00000488971 KDM4FA0A1W2PPD8 638 aa9.01□□□□□ -0.97
KDM3A-213ENST00000488971 PPP4R3BQ5MIZ7 849 aa9.01□□□□□ -0.97
KDM3A-213ENST00000488971 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
KDM3A-213ENST00000488971 PDE4AP27815 886 aa8.99□□□□□ -0.97
KDM3A-213ENST00000488971 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
KDM3A-213ENST00000488971 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
KDM3A-213ENST00000488971 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
KDM3A-213ENST00000488971 PSEN2P49810 448 aa8.97□□□□□ -0.97
KDM3A-213ENST00000488971 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
KDM3A-213ENST00000488971 KCNH8Q96L42 1107 aa8.97□□□□□ -0.97
KDM3A-213ENST00000488971 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
KDM3A-213ENST00000488971 DMRTA1Q5VZB9 504 aa8.96□□□□□ -0.98
KDM3A-213ENST00000488971 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
KDM3A-213ENST00000488971 TK2O00142 265 aa8.94□□□□□ -0.98
KDM3A-213ENST00000488971 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
KDM3A-213ENST00000488971 NCKAP5LQ9HCH0 1330 aa8.94□□□□□ -0.98
KDM3A-213ENST00000488971 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
KDM3A-213ENST00000488971 LARP6Q9BRS8 491 aaKnown RBP8.93□□□□□ -0.98
KDM3A-213ENST00000488971 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
KDM3A-213ENST00000488971 HCSTQ9UBK5 93 aa8.91□□□□□ -0.98
KDM3A-213ENST00000488971 HAP1P54257 671 aaPredicted RBP8.9□□□□□ -0.98
KDM3A-213ENST00000488971 HRO43593 1189 aa8.89□□□□□ -0.99
KDM3A-213ENST00000488971 EVI5O60447 810 aa8.88□□□□□ -0.99
KDM3A-213ENST00000488971 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
KDM3A-213ENST00000488971 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
KDM3A-213ENST00000488971 FOSBP53539 338 aa8.86□□□□□ -0.99
KDM3A-213ENST00000488971 PTPREP23469 700 aa8.85□□□□□ -0.99
KDM3A-213ENST00000488971 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
KDM3A-213ENST00000488971 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
KDM3A-213ENST00000488971 MFSD10Q14728 455 aa8.84□□□□□ -0.99
KDM3A-213ENST00000488971 ANO8Q9HCE9 1232 aaPredicted RBP8.84□□□□□ -0.99
KDM3A-213ENST00000488971 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
KDM3A-213ENST00000488971 VSIG10Q8N0Z9 540 aa8.83□□□□□ -1
KDM3A-213ENST00000488971 JPH4Q96JJ6 628 aa8.83□□□□□ -1
KDM3A-213ENST00000488971 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
KDM3A-213ENST00000488971 BCANQ96GW7 911 aa8.82□□□□□ -1
KDM3A-213ENST00000488971 CADPS2Q86UW7 1296 aa8.81□□□□□ -1
KDM3A-213ENST00000488971 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
KDM3A-213ENST00000488971 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
KDM3A-213ENST00000488971 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
KDM3A-213ENST00000488971 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
KDM3A-213ENST00000488971 PTPN5P54829 565 aa8.78□□□□□ -1
KDM3A-213ENST00000488971 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
KDM3A-213ENST00000488971 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
KDM3A-213ENST00000488971 ZBED2Q9BTP6 218 aa8.77□□□□□ -1.01
KDM3A-213ENST00000488971 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
KDM3A-213ENST00000488971 PCDHGA10Q9Y5H3 936 aa8.75□□□□□ -1.01
KDM3A-213ENST00000488971 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
KDM3A-213ENST00000488971 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
KDM3A-213ENST00000488971 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms