RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 RIMS1Q86UR5 1692 aaKnown RBP26.13■■□□□ 1.77
ERGIC3-217ENST00000488935 ZFYVE16Q7Z3T8 1539 aa26.09■■□□□ 1.77
ERGIC3-217ENST00000488935 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.77
ERGIC3-217ENST00000488935 CDK11AQ9UQ88 783 aaPredicted RBP26.08■■□□□ 1.77
ERGIC3-217ENST00000488935 ZMYM4Q5VZL5 1548 aa26.08■■□□□ 1.77
ERGIC3-217ENST00000488935 EFCAB2Q5VUJ9 269 aa26.07■■□□□ 1.76
ERGIC3-217ENST00000488935 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
ERGIC3-217ENST00000488935 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
ERGIC3-217ENST00000488935 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
ERGIC3-217ENST00000488935 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
ERGIC3-217ENST00000488935 ARHGAP5Q13017 1502 aa26.01■■□□□ 1.75
ERGIC3-217ENST00000488935 HSPA2P54652 639 aa26■■□□□ 1.75
ERGIC3-217ENST00000488935 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
ERGIC3-217ENST00000488935 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
ERGIC3-217ENST00000488935 CLIP1P30622 1438 aa25.97■■□□□ 1.75
ERGIC3-217ENST00000488935 LMTK3Q96Q04 1460 aa25.97■■□□□ 1.75
ERGIC3-217ENST00000488935 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
ERGIC3-217ENST00000488935 CASKIN1Q8WXD9 1431 aa25.95■■□□□ 1.74
ERGIC3-217ENST00000488935 ATP10AO60312 1499 aa25.94■■□□□ 1.74
ERGIC3-217ENST00000488935 FER1L4A9Z1Z3 1794 aa25.94■■□□□ 1.74
ERGIC3-217ENST00000488935 CEBPAP49715 358 aaPredicted RBP25.92■■□□□ 1.74
ERGIC3-217ENST00000488935 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
ERGIC3-217ENST00000488935 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
ERGIC3-217ENST00000488935 TRAPPC8Q9Y2L5 1435 aa25.88■■□□□ 1.73
ERGIC3-217ENST00000488935 ZNF518AQ6AHZ1 1483 aa25.87■■□□□ 1.73
ERGIC3-217ENST00000488935 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
ERGIC3-217ENST00000488935 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
ERGIC3-217ENST00000488935 PREX2Q70Z35 1606 aa25.85■■□□□ 1.73
ERGIC3-217ENST00000488935 KDM5CP41229 1560 aa25.84■■□□□ 1.73
ERGIC3-217ENST00000488935 CDC42BPAQ5VT25 1732 aa25.83■■□□□ 1.73
ERGIC3-217ENST00000488935 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
ERGIC3-217ENST00000488935 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
ERGIC3-217ENST00000488935 FYCO1Q9BQS8 1478 aa25.8■■□□□ 1.72
ERGIC3-217ENST00000488935 ABCC1P33527 1531 aa25.8■■□□□ 1.72
ERGIC3-217ENST00000488935 ITSN2Q9NZM3 1697 aa25.8■■□□□ 1.72
ERGIC3-217ENST00000488935 HNRNPMP52272 730 aaKnown RBP eCLIP25.76■■□□□ 1.71
ERGIC3-217ENST00000488935 FBXO41Q8TF61 875 aa25.76■■□□□ 1.71
ERGIC3-217ENST00000488935 MLH3Q9UHC1 1453 aa25.73■■□□□ 1.71
ERGIC3-217ENST00000488935 KIDINS220Q9ULH0 1771 aa25.73■■□□□ 1.71
ERGIC3-217ENST00000488935 SAMD9LQ8IVG5 1584 aa25.72■■□□□ 1.71
ERGIC3-217ENST00000488935 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
ERGIC3-217ENST00000488935 SYCP2Q9BX26 1530 aa25.69■■□□□ 1.7
ERGIC3-217ENST00000488935 PREX1Q8TCU6 1659 aa25.68■■□□□ 1.7
ERGIC3-217ENST00000488935 CFDP1Q9UEE9 299 aaPredicted RBP25.65■■□□□ 1.7
ERGIC3-217ENST00000488935 REREQ9P2R6 1566 aa25.65■■□□□ 1.7
ERGIC3-217ENST00000488935 C3P01024 1663 aa25.64■■□□□ 1.7
ERGIC3-217ENST00000488935 MTUS2Q5JR59 1369 aa25.64■■□□□ 1.69
ERGIC3-217ENST00000488935 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
ERGIC3-217ENST00000488935 ESF1Q9H501 851 aaKnown RBP25.63■■□□□ 1.69
ERGIC3-217ENST00000488935 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
ERGIC3-217ENST00000488935 SPAG9O60271 1321 aaKnown RBP25.63■■□□□ 1.69
ERGIC3-217ENST00000488935 SUPT6HQ7KZ85 1726 aaKnown RBP25.61■■□□□ 1.69
ERGIC3-217ENST00000488935 AGLP35573 1532 aa25.6■■□□□ 1.69
ERGIC3-217ENST00000488935 SETD1BQ9UPS6 1966 aaKnown RBP25.59■■□□□ 1.69
ERGIC3-217ENST00000488935 STRCQ7RTU9 1775 aa25.59■■□□□ 1.69
ERGIC3-217ENST00000488935 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
ERGIC3-217ENST00000488935 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
ERGIC3-217ENST00000488935 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
ERGIC3-217ENST00000488935 CERKQ8TCT0 537 aa25.56■■□□□ 1.68
ERGIC3-217ENST00000488935 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
ERGIC3-217ENST00000488935 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
ERGIC3-217ENST00000488935 GGT6Q6P531 493 aa25.5■■□□□ 1.67
ERGIC3-217ENST00000488935 KIAA1107Q9UPP5 1409 aa25.5■■□□□ 1.67
ERGIC3-217ENST00000488935 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
ERGIC3-217ENST00000488935 EHBP1L1Q8N3D4 1523 aa25.47■■□□□ 1.67
ERGIC3-217ENST00000488935 A2MP01023 1474 aa25.47■■□□□ 1.67
ERGIC3-217ENST00000488935 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
ERGIC3-217ENST00000488935 ZMYM3Q14202 1370 aa25.47■■□□□ 1.67
ERGIC3-217ENST00000488935 CLTCQ00610 1675 aaKnown RBP25.47■■□□□ 1.67
ERGIC3-217ENST00000488935 CNTLNQ9NXG0 1405 aa25.45■■□□□ 1.66
ERGIC3-217ENST00000488935 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
ERGIC3-217ENST00000488935 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
ERGIC3-217ENST00000488935 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
ERGIC3-217ENST00000488935 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
ERGIC3-217ENST00000488935 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
ERGIC3-217ENST00000488935 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
ERGIC3-217ENST00000488935 ADGBQ8N7X0 1667 aa25.37■■□□□ 1.65
ERGIC3-217ENST00000488935 CAMSAP1Q5T5Y3 1602 aa25.35■■□□□ 1.65
ERGIC3-217ENST00000488935 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
ERGIC3-217ENST00000488935 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
ERGIC3-217ENST00000488935 PTPRTO14522 1441 aa25.32■■□□□ 1.64
ERGIC3-217ENST00000488935 NPATQ14207 1427 aa25.32■■□□□ 1.64
ERGIC3-217ENST00000488935 PTPRKQ15262 1439 aa25.32■■□□□ 1.64
ERGIC3-217ENST00000488935 KIF3BO15066 747 aa25.31■■□□□ 1.64
ERGIC3-217ENST00000488935 KANK4Q5T7N3 995 aaPredicted RBP25.31■■□□□ 1.64
ERGIC3-217ENST00000488935 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
ERGIC3-217ENST00000488935 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
ERGIC3-217ENST00000488935 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
ERGIC3-217ENST00000488935 MYO3AQ8NEV4 1616 aa25.28■■□□□ 1.64
ERGIC3-217ENST00000488935 FBXO31Q5XUX0 539 aaPredicted RBP25.28■■□□□ 1.64
ERGIC3-217ENST00000488935 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
ERGIC3-217ENST00000488935 LRRC9Q6ZRR7 1453 aa25.25■■□□□ 1.63
ERGIC3-217ENST00000488935 LTBP4Q8N2S1 1624 aa25.25■■□□□ 1.63
ERGIC3-217ENST00000488935 CEP170BQ9Y4F5 1589 aaPredicted RBP25.23■■□□□ 1.63
ERGIC3-217ENST00000488935 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
ERGIC3-217ENST00000488935 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.63
ERGIC3-217ENST00000488935 PPP6R1Q9UPN7 881 aa25.2■■□□□ 1.62
ERGIC3-217ENST00000488935 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
ERGIC3-217ENST00000488935 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
ERGIC3-217ENST00000488935 WASHC2CQ9Y4E1 1318 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms