RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 MYO5CQ9NQX4 1742 aa17.65■□□□□ 0.42
ARHGEF39-204ENST00000488918 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
ARHGEF39-204ENST00000488918 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF39-204ENST00000488918 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
ARHGEF39-204ENST00000488918 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
ARHGEF39-204ENST00000488918 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
ARHGEF39-204ENST00000488918 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
ARHGEF39-204ENST00000488918 ZNF518AQ6AHZ1 1483 aa17.56■□□□□ 0.4
ARHGEF39-204ENST00000488918 EHBP1L1Q8N3D4 1523 aa17.56■□□□□ 0.4
ARHGEF39-204ENST00000488918 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
ARHGEF39-204ENST00000488918 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
ARHGEF39-204ENST00000488918 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
ARHGEF39-204ENST00000488918 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
ARHGEF39-204ENST00000488918 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
ARHGEF39-204ENST00000488918 RICTORQ6R327 1708 aa17.51■□□□□ 0.39
ARHGEF39-204ENST00000488918 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
ARHGEF39-204ENST00000488918 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
ARHGEF39-204ENST00000488918 ZMYM4Q5VZL5 1548 aa17.5■□□□□ 0.39
ARHGEF39-204ENST00000488918 ARHGEF40Q8TER5 1519 aa17.5■□□□□ 0.39
ARHGEF39-204ENST00000488918 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
ARHGEF39-204ENST00000488918 MLECQ14165 292 aa17.49■□□□□ 0.39
ARHGEF39-204ENST00000488918 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
ARHGEF39-204ENST00000488918 CDC42BPBQ9Y5S2 1711 aa17.48■□□□□ 0.39
ARHGEF39-204ENST00000488918 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-204ENST00000488918 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
ARHGEF39-204ENST00000488918 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
ARHGEF39-204ENST00000488918 ATP10AO60312 1499 aa17.47■□□□□ 0.39
ARHGEF39-204ENST00000488918 CDC42BPAQ5VT25 1732 aa17.46■□□□□ 0.39
ARHGEF39-204ENST00000488918 SUPT6HQ7KZ85 1726 aaKnown RBP17.46■□□□□ 0.39
ARHGEF39-204ENST00000488918 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
ARHGEF39-204ENST00000488918 ABCC1P33527 1531 aa17.45■□□□□ 0.38
ARHGEF39-204ENST00000488918 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
ARHGEF39-204ENST00000488918 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
ARHGEF39-204ENST00000488918 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
ARHGEF39-204ENST00000488918 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
ARHGEF39-204ENST00000488918 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
ARHGEF39-204ENST00000488918 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
ARHGEF39-204ENST00000488918 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
ARHGEF39-204ENST00000488918 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
ARHGEF39-204ENST00000488918 RSPH4AQ5TD94 716 aa17.42■□□□□ 0.38
ARHGEF39-204ENST00000488918 SYCP2Q9BX26 1530 aa17.42■□□□□ 0.38
ARHGEF39-204ENST00000488918 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
ARHGEF39-204ENST00000488918 KDM5CP41229 1560 aa17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
ARHGEF39-204ENST00000488918 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.37
ARHGEF39-204ENST00000488918 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
ARHGEF39-204ENST00000488918 PTPRMP28827 1452 aa17.35■□□□□ 0.37
ARHGEF39-204ENST00000488918 CAMSAP2Q08AD1 1489 aa17.33■□□□□ 0.37
ARHGEF39-204ENST00000488918 MYOM3Q5VTT5 1437 aa17.32■□□□□ 0.36
ARHGEF39-204ENST00000488918 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
ARHGEF39-204ENST00000488918 MADDQ8WXG6 1647 aa17.32■□□□□ 0.36
ARHGEF39-204ENST00000488918 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
ARHGEF39-204ENST00000488918 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
ARHGEF39-204ENST00000488918 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
ARHGEF39-204ENST00000488918 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
ARHGEF39-204ENST00000488918 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
ARHGEF39-204ENST00000488918 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
ARHGEF39-204ENST00000488918 GGT6Q6P531 493 aa17.28■□□□□ 0.36
ARHGEF39-204ENST00000488918 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
ARHGEF39-204ENST00000488918 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
ARHGEF39-204ENST00000488918 A2MP01023 1474 aa17.27■□□□□ 0.36
ARHGEF39-204ENST00000488918 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
ARHGEF39-204ENST00000488918 KIDINS220Q9ULH0 1771 aa17.27■□□□□ 0.35
ARHGEF39-204ENST00000488918 AGLP35573 1532 aa17.26■□□□□ 0.35
ARHGEF39-204ENST00000488918 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
ARHGEF39-204ENST00000488918 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
ARHGEF39-204ENST00000488918 CNTLNQ9NXG0 1405 aa17.23■□□□□ 0.35
ARHGEF39-204ENST00000488918 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF39-204ENST00000488918 KIF3BO15066 747 aa17.22■□□□□ 0.35
ARHGEF39-204ENST00000488918 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF39-204ENST00000488918 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
ARHGEF39-204ENST00000488918 ARHGEF5Q12774 1597 aa17.21■□□□□ 0.35
ARHGEF39-204ENST00000488918 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
ARHGEF39-204ENST00000488918 SIGLEC1Q9BZZ2 1709 aa17.2■□□□□ 0.34
ARHGEF39-204ENST00000488918 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
ARHGEF39-204ENST00000488918 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
ARHGEF39-204ENST00000488918 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
ARHGEF39-204ENST00000488918 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
ARHGEF39-204ENST00000488918 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
ARHGEF39-204ENST00000488918 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
ARHGEF39-204ENST00000488918 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
ARHGEF39-204ENST00000488918 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
ARHGEF39-204ENST00000488918 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
ARHGEF39-204ENST00000488918 PLXNC1O60486 1568 aa17.13■□□□□ 0.33
ARHGEF39-204ENST00000488918 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
ARHGEF39-204ENST00000488918 DAPK1P53355 1430 aa17.12■□□□□ 0.33
ARHGEF39-204ENST00000488918 HSPA2P54652 639 aa17.11■□□□□ 0.33
ARHGEF39-204ENST00000488918 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
ARHGEF39-204ENST00000488918 TCOF1Q13428 1488 aaKnown RBP17.1■□□□□ 0.33
ARHGEF39-204ENST00000488918 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
ARHGEF39-204ENST00000488918 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
ARHGEF39-204ENST00000488918 ABCC5O15440 1437 aa17.09■□□□□ 0.33
ARHGEF39-204ENST00000488918 LMTK3Q96Q04 1460 aa17.08■□□□□ 0.32
ARHGEF39-204ENST00000488918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
ARHGEF39-204ENST00000488918 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
ARHGEF39-204ENST00000488918 KANK1Q14678 1352 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms