RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
CTNNB1-215ENST00000488914 DOK7Q18PE1 504 aa13.27□□□□□ -0.29
CTNNB1-215ENST00000488914 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
CTNNB1-215ENST00000488914 EMP3P54852 163 aa13.26□□□□□ -0.29
CTNNB1-215ENST00000488914 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
CTNNB1-215ENST00000488914 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
CTNNB1-215ENST00000488914 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
CTNNB1-215ENST00000488914 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
CTNNB1-215ENST00000488914 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
CTNNB1-215ENST00000488914 HOXB1P14653 301 aaPredicted RBP13.23□□□□□ -0.29
CTNNB1-215ENST00000488914 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
CTNNB1-215ENST00000488914 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
CTNNB1-215ENST00000488914 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
CTNNB1-215ENST00000488914 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
CTNNB1-215ENST00000488914 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
CTNNB1-215ENST00000488914 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTNNB1-215ENST00000488914 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
CTNNB1-215ENST00000488914 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CTNNB1-215ENST00000488914 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
CTNNB1-215ENST00000488914 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
CTNNB1-215ENST00000488914 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-215ENST00000488914 ERBB3P21860 1342 aa13.1□□□□□ -0.31
CTNNB1-215ENST00000488914 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
CTNNB1-215ENST00000488914 DSG2Q14126 1118 aa13.08□□□□□ -0.32
CTNNB1-215ENST00000488914 FOXK1P85037 733 aa13.06□□□□□ -0.32
CTNNB1-215ENST00000488914 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
CTNNB1-215ENST00000488914 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
CTNNB1-215ENST00000488914 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
CTNNB1-215ENST00000488914 KRTAP3-2Q9BYR7 98 aa13.06□□□□□ -0.32
CTNNB1-215ENST00000488914 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
CTNNB1-215ENST00000488914 SLC34A2O95436 690 aa13.04□□□□□ -0.32
CTNNB1-215ENST00000488914 NUDT7P0C024 238 aa13.03□□□□□ -0.32
CTNNB1-215ENST00000488914 CRISPLD2Q9H0B8 497 aa13.03□□□□□ -0.32
CTNNB1-215ENST00000488914 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
CTNNB1-215ENST00000488914 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
CTNNB1-215ENST00000488914 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
CTNNB1-215ENST00000488914 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
CTNNB1-215ENST00000488914 SPNS2Q8IVW8 549 aa12.97□□□□□ -0.33
CTNNB1-215ENST00000488914 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
CTNNB1-215ENST00000488914 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
CTNNB1-215ENST00000488914 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
CTNNB1-215ENST00000488914 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
CTNNB1-215ENST00000488914 PDE4AP27815 886 aa12.93□□□□□ -0.34
CTNNB1-215ENST00000488914 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
CTNNB1-215ENST00000488914 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
CTNNB1-215ENST00000488914 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTNNB1-215ENST00000488914 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
CTNNB1-215ENST00000488914 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
CTNNB1-215ENST00000488914 MFSD10Q14728 455 aa12.85□□□□□ -0.35
CTNNB1-215ENST00000488914 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
CTNNB1-215ENST00000488914 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
CTNNB1-215ENST00000488914 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
CTNNB1-215ENST00000488914 TBC1D12O60347 775 aa12.82□□□□□ -0.36
CTNNB1-215ENST00000488914 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
CTNNB1-215ENST00000488914 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
CTNNB1-215ENST00000488914 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
CTNNB1-215ENST00000488914 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
CTNNB1-215ENST00000488914 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
CTNNB1-215ENST00000488914 ANKRD13DQ6ZTN6 518 aa12.76□□□□□ -0.37
CTNNB1-215ENST00000488914 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTNNB1-215ENST00000488914 EVI5O60447 810 aa12.71□□□□□ -0.37
CTNNB1-215ENST00000488914 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
CTNNB1-215ENST00000488914 PBX2P40425 430 aa12.7□□□□□ -0.38
CTNNB1-215ENST00000488914 PSEN2P49810 448 aa12.7□□□□□ -0.38
CTNNB1-215ENST00000488914 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
CTNNB1-215ENST00000488914 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
CTNNB1-215ENST00000488914 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
CTNNB1-215ENST00000488914 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
CTNNB1-215ENST00000488914 CAMK2BQ13554 666 aa12.67□□□□□ -0.38
CTNNB1-215ENST00000488914 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
CTNNB1-215ENST00000488914 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
CTNNB1-215ENST00000488914 FOSBP53539 338 aa12.65□□□□□ -0.38
CTNNB1-215ENST00000488914 DPYSL4O14531 572 aa12.63□□□□□ -0.39
CTNNB1-215ENST00000488914 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
CTNNB1-215ENST00000488914 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
CTNNB1-215ENST00000488914 RNF166Q96A37 237 aaPredicted RBP12.6□□□□□ -0.39
CTNNB1-215ENST00000488914 ADGRD1Q6QNK2 874 aa12.59□□□□□ -0.39
CTNNB1-215ENST00000488914 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
CTNNB1-215ENST00000488914 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
CTNNB1-215ENST00000488914 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
CTNNB1-215ENST00000488914 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
CTNNB1-215ENST00000488914 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
CTNNB1-215ENST00000488914 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
CTNNB1-215ENST00000488914 PTGER2P43116 358 aa12.53□□□□□ -0.4
CTNNB1-215ENST00000488914 HRO43593 1189 aa12.52□□□□□ -0.41
CTNNB1-215ENST00000488914 TK2O00142 265 aa12.51□□□□□ -0.41
CTNNB1-215ENST00000488914 E2F4Q16254 413 aa12.51□□□□□ -0.41
CTNNB1-215ENST00000488914 PTPREP23469 700 aa12.5□□□□□ -0.41
CTNNB1-215ENST00000488914 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
CTNNB1-215ENST00000488914 VPS9D1Q9Y2B5 631 aa12.49□□□□□ -0.41
CTNNB1-215ENST00000488914 DDX12PQ92771 950 aa12.48□□□□□ -0.41
CTNNB1-215ENST00000488914 PHF14O94880 888 aa12.47□□□□□ -0.41
CTNNB1-215ENST00000488914 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
CTNNB1-215ENST00000488914 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
CTNNB1-215ENST00000488914 COL9A1P20849 921 aa12.45□□□□□ -0.42
CTNNB1-215ENST00000488914 PDIA6Q15084 440 aa12.45□□□□□ -0.42
CTNNB1-215ENST00000488914 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CTNNB1-215ENST00000488914 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
CTNNB1-215ENST00000488914 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
CTNNB1-215ENST00000488914 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms