RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
COL16A1-215ENST00000488897 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
COL16A1-215ENST00000488897 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
COL16A1-215ENST00000488897 ABCA9Q8IUA7 1624 aa27.1■■□□□ 1.93
COL16A1-215ENST00000488897 CDC42BPAQ5VT25 1732 aa27.1■■□□□ 1.93
COL16A1-215ENST00000488897 HNRNPMP52272 730 aaKnown RBP eCLIP27.08■■□□□ 1.93
COL16A1-215ENST00000488897 ZNF316A6NFI3 1004 aaPredicted RBP27.07■■□□□ 1.92
COL16A1-215ENST00000488897 CDC42BPBQ9Y5S2 1711 aa27.07■■□□□ 1.92
COL16A1-215ENST00000488897 ARHGAP5Q13017 1502 aa27.07■■□□□ 1.92
COL16A1-215ENST00000488897 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
COL16A1-215ENST00000488897 PLCH2O75038 1416 aa27.05■■□□□ 1.92
COL16A1-215ENST00000488897 MAP3K4Q9Y6R4 1608 aa27.04■■□□□ 1.92
COL16A1-215ENST00000488897 CENPBP07199 599 aaPredicted RBP27.03■■□□□ 1.92
COL16A1-215ENST00000488897 MYO5CQ9NQX4 1742 aa27.02■■□□□ 1.92
COL16A1-215ENST00000488897 FANCAO15360 1455 aa27.01■■□□□ 1.92
COL16A1-215ENST00000488897 RAPGEF3O95398 923 aa27.01■■□□□ 1.92
COL16A1-215ENST00000488897 GLI2P10070 1586 aa27.01■■□□□ 1.91
COL16A1-215ENST00000488897 EFCAB2Q5VUJ9 269 aa27.01■■□□□ 1.91
COL16A1-215ENST00000488897 FGD6Q6ZV73 1430 aa27■■□□□ 1.91
COL16A1-215ENST00000488897 PPRC1Q5VV67 1664 aaKnown RBP26.99■■□□□ 1.91
COL16A1-215ENST00000488897 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
COL16A1-215ENST00000488897 AFAP1Q8N556 730 aa26.98■■□□□ 1.91
COL16A1-215ENST00000488897 PREX2Q70Z35 1606 aa26.98■■□□□ 1.91
COL16A1-215ENST00000488897 CHIC2Q9UKJ5 165 aa26.97■■□□□ 1.91
COL16A1-215ENST00000488897 ARHGEF12Q9NZN5 1544 aa26.95■■□□□ 1.9
COL16A1-215ENST00000488897 SAMD9LQ8IVG5 1584 aa26.94■■□□□ 1.9
COL16A1-215ENST00000488897 COL17A1Q9UMD9 1497 aaPredicted RBP26.92■■□□□ 1.9
COL16A1-215ENST00000488897 AKNAQ7Z591 1439 aa26.92■■□□□ 1.9
COL16A1-215ENST00000488897 CAMSAP2Q08AD1 1489 aa26.92■■□□□ 1.9
COL16A1-215ENST00000488897 PTPN23Q9H3S7 1636 aa26.91■■□□□ 1.9
COL16A1-215ENST00000488897 SCAPERQ9BY12 1400 aa26.9■■□□□ 1.9
COL16A1-215ENST00000488897 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.9
COL16A1-215ENST00000488897 SYCP2Q9BX26 1530 aa26.88■■□□□ 1.89
COL16A1-215ENST00000488897 TRAPPC8Q9Y2L5 1435 aa26.88■■□□□ 1.89
COL16A1-215ENST00000488897 ADGRL1O94910 1474 aa26.88■■□□□ 1.89
COL16A1-215ENST00000488897 MYT1LQ9UL68 1186 aa26.87■■□□□ 1.89
COL16A1-215ENST00000488897 MIA2Q96PC5 1412 aa26.84■■□□□ 1.89
COL16A1-215ENST00000488897 RRBP1Q9P2E9 1410 aaKnown RBP26.84■■□□□ 1.89
COL16A1-215ENST00000488897 PTPRKQ15262 1439 aa26.84■■□□□ 1.89
COL16A1-215ENST00000488897 MBD5Q9P267 1494 aa26.8■■□□□ 1.88
COL16A1-215ENST00000488897 ABCC1P33527 1531 aa26.78■■□□□ 1.88
COL16A1-215ENST00000488897 TEX14Q8IWB6 1497 aa26.78■■□□□ 1.88
COL16A1-215ENST00000488897 RRP7BPQ9NSQ0 103 aa26.78■■□□□ 1.88
COL16A1-215ENST00000488897 ABCC5O15440 1437 aa26.77■■□□□ 1.88
COL16A1-215ENST00000488897 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.87
COL16A1-215ENST00000488897 TCOF1Q13428 1488 aaKnown RBP26.76■■□□□ 1.87
COL16A1-215ENST00000488897 NEO1Q92859 1461 aa26.76■■□□□ 1.87
COL16A1-215ENST00000488897 ARAP3Q8WWN8 1544 aa26.75■■□□□ 1.87
COL16A1-215ENST00000488897 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
COL16A1-215ENST00000488897 DAPK1P53355 1430 aa26.73■■□□□ 1.87
COL16A1-215ENST00000488897 DENND4BO75064 1496 aaPredicted RBP26.71■■□□□ 1.87
COL16A1-215ENST00000488897 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
COL16A1-215ENST00000488897 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
COL16A1-215ENST00000488897 SPAG9O60271 1321 aaKnown RBP26.69■■□□□ 1.86
COL16A1-215ENST00000488897 POGZQ7Z3K3 1410 aa26.68■■□□□ 1.86
COL16A1-215ENST00000488897 KIAA1107Q9UPP5 1409 aa26.68■■□□□ 1.86
COL16A1-215ENST00000488897 FRMPD1Q5SYB0 1578 aa26.67■■□□□ 1.86
COL16A1-215ENST00000488897 KDM6BO15054 1643 aa26.66■■□□□ 1.86
COL16A1-215ENST00000488897 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
COL16A1-215ENST00000488897 CCDC141Q6ZP82 1450 aa26.66■■□□□ 1.86
COL16A1-215ENST00000488897 YEATS2Q9ULM3 1422 aa26.65■■□□□ 1.86
COL16A1-215ENST00000488897 DNMT1P26358 1616 aaKnown RBP26.64■■□□□ 1.85
COL16A1-215ENST00000488897 RICTORQ6R327 1708 aa26.63■■□□□ 1.85
COL16A1-215ENST00000488897 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
COL16A1-215ENST00000488897 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
COL16A1-215ENST00000488897 ZNF518AQ6AHZ1 1483 aa26.61■■□□□ 1.85
COL16A1-215ENST00000488897 DHX57Q6P158 1386 aaKnown RBP26.61■■□□□ 1.85
COL16A1-215ENST00000488897 MIER1Q8N108 512 aa26.6■■□□□ 1.85
COL16A1-215ENST00000488897 ARHGEF5Q12774 1597 aa26.57■■□□□ 1.84
COL16A1-215ENST00000488897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.57■■□□□ 1.84
COL16A1-215ENST00000488897 RSPH4AQ5TD94 716 aa26.55■■□□□ 1.84
COL16A1-215ENST00000488897 KIDINS220Q9ULH0 1771 aa26.54■■□□□ 1.84
COL16A1-215ENST00000488897 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
COL16A1-215ENST00000488897 NCOA1Q15788 1441 aa26.52■■□□□ 1.84
COL16A1-215ENST00000488897 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
COL16A1-215ENST00000488897 KDM5CP41229 1560 aa26.52■■□□□ 1.84
COL16A1-215ENST00000488897 ATP7AQ04656 1500 aa26.52■■□□□ 1.84
COL16A1-215ENST00000488897 MLECQ14165 292 aa26.51■■□□□ 1.84
COL16A1-215ENST00000488897 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
COL16A1-215ENST00000488897 YTHDC1Q96MU7 727 aaKnown RBP26.49■■□□□ 1.83
COL16A1-215ENST00000488897 HECW2Q9P2P5 1572 aa26.48■■□□□ 1.83
COL16A1-215ENST00000488897 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
COL16A1-215ENST00000488897 ABCA6Q8N139 1617 aa26.47■■□□□ 1.83
COL16A1-215ENST00000488897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.46■■□□□ 1.83
COL16A1-215ENST00000488897 INO80Q9ULG1 1556 aaPredicted RBP26.46■■□□□ 1.83
COL16A1-215ENST00000488897 MLH3Q9UHC1 1453 aa26.46■■□□□ 1.83
COL16A1-215ENST00000488897 ARID4BQ4LE39 1312 aaPredicted RBP26.46■■□□□ 1.83
COL16A1-215ENST00000488897 SIGLEC1Q9BZZ2 1709 aa26.45■■□□□ 1.82
COL16A1-215ENST00000488897 NAIPQ13075 1403 aa26.44■■□□□ 1.82
COL16A1-215ENST00000488897 KIF3BO15066 747 aa26.44■■□□□ 1.82
COL16A1-215ENST00000488897 GGT6Q6P531 493 aa26.43■■□□□ 1.82
COL16A1-215ENST00000488897 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
COL16A1-215ENST00000488897 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
COL16A1-215ENST00000488897 RTEL1-TNFRSF6BF6WH68 1400 aa26.4■■□□□ 1.82
COL16A1-215ENST00000488897 ZMYM4Q5VZL5 1548 aa26.39■■□□□ 1.82
COL16A1-215ENST00000488897 ADGBQ8N7X0 1667 aa26.38■■□□□ 1.81
COL16A1-215ENST00000488897 RAB3GAP2Q9H2M9 1393 aa26.38■■□□□ 1.81
COL16A1-215ENST00000488897 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
COL16A1-215ENST00000488897 ADGRL2O95490 1459 aa26.37■■□□□ 1.81
COL16A1-215ENST00000488897 ANKRD50Q9ULJ7 1429 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms