RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ABCC2Q92887 1545 aa11.58□□□□□ -0.56
APOBEC3A-203ENST00000488758 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
APOBEC3A-203ENST00000488758 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
APOBEC3A-203ENST00000488758 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
APOBEC3A-203ENST00000488758 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
APOBEC3A-203ENST00000488758 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3A-203ENST00000488758 TROQ12816 1431 aaPredicted RBP11.52□□□□□ -0.56
APOBEC3A-203ENST00000488758 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
APOBEC3A-203ENST00000488758 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.57
APOBEC3A-203ENST00000488758 ABCB7O75027 752 aa11.52□□□□□ -0.57
APOBEC3A-203ENST00000488758 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
APOBEC3A-203ENST00000488758 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.57
APOBEC3A-203ENST00000488758 ZCCHC11Q5TAX3 1644 aaKnown RBP11.5□□□□□ -0.57
APOBEC3A-203ENST00000488758 NCOA2Q15596 1464 aa11.5□□□□□ -0.57
APOBEC3A-203ENST00000488758 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
APOBEC3A-203ENST00000488758 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
APOBEC3A-203ENST00000488758 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
APOBEC3A-203ENST00000488758 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
APOBEC3A-203ENST00000488758 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
APOBEC3A-203ENST00000488758 TSPOAP1O95153 1857 aa11.45□□□□□ -0.58
APOBEC3A-203ENST00000488758 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
APOBEC3A-203ENST00000488758 KIF14Q15058 1648 aa11.45□□□□□ -0.58
APOBEC3A-203ENST00000488758 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
APOBEC3A-203ENST00000488758 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
APOBEC3A-203ENST00000488758 CFDP1Q9UEE9 299 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3A-203ENST00000488758 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
APOBEC3A-203ENST00000488758 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3A-203ENST00000488758 WDR7Q9Y4E6 1490 aa11.42□□□□□ -0.58
APOBEC3A-203ENST00000488758 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
APOBEC3A-203ENST00000488758 ITGAEP38570 1179 aa11.41□□□□□ -0.58
APOBEC3A-203ENST00000488758 ZNF777Q9ULD5 760 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3A-203ENST00000488758 KDM6BO15054 1643 aa11.41□□□□□ -0.58
APOBEC3A-203ENST00000488758 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
APOBEC3A-203ENST00000488758 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.58
APOBEC3A-203ENST00000488758 ABCC10Q5T3U5 1492 aa11.4□□□□□ -0.58
APOBEC3A-203ENST00000488758 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
APOBEC3A-203ENST00000488758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.4□□□□□ -0.59
APOBEC3A-203ENST00000488758 FAM69CQ0P6D2 419 aa11.39□□□□□ -0.59
APOBEC3A-203ENST00000488758 POLA2Q14181 598 aa11.38□□□□□ -0.59
APOBEC3A-203ENST00000488758 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
APOBEC3A-203ENST00000488758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.38□□□□□ -0.59
APOBEC3A-203ENST00000488758 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
APOBEC3A-203ENST00000488758 MAPKBP1O60336 1514 aa11.36□□□□□ -0.59
APOBEC3A-203ENST00000488758 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
APOBEC3A-203ENST00000488758 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
APOBEC3A-203ENST00000488758 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3A-203ENST00000488758 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
APOBEC3A-203ENST00000488758 TTC37Q6PGP7 1564 aa11.35□□□□□ -0.59
APOBEC3A-203ENST00000488758 PLCH2O75038 1416 aa11.35□□□□□ -0.59
APOBEC3A-203ENST00000488758 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
APOBEC3A-203ENST00000488758 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
APOBEC3A-203ENST00000488758 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 PREX2Q70Z35 1606 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 CD109Q6YHK3 1445 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
APOBEC3A-203ENST00000488758 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.6
APOBEC3A-203ENST00000488758 TSPY4P0CV99 314 aa11.3□□□□□ -0.6
APOBEC3A-203ENST00000488758 TSPY10P0CW01 314 aa11.3□□□□□ -0.6
APOBEC3A-203ENST00000488758 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
APOBEC3A-203ENST00000488758 CHIC2Q9UKJ5 165 aa11.29□□□□□ -0.6
APOBEC3A-203ENST00000488758 ARAP3Q8WWN8 1544 aa11.29□□□□□ -0.6
APOBEC3A-203ENST00000488758 ABCC5O15440 1437 aa11.28□□□□□ -0.6
APOBEC3A-203ENST00000488758 GLI2P10070 1586 aa11.28□□□□□ -0.6
APOBEC3A-203ENST00000488758 DAPK1P53355 1430 aa11.27□□□□□ -0.6
APOBEC3A-203ENST00000488758 PPRC1Q5VV67 1664 aaKnown RBP11.27□□□□□ -0.6
APOBEC3A-203ENST00000488758 FANCAO15360 1455 aa11.27□□□□□ -0.6
APOBEC3A-203ENST00000488758 SAMD9LQ8IVG5 1584 aa11.27□□□□□ -0.61
APOBEC3A-203ENST00000488758 PTPRKQ15262 1439 aa11.26□□□□□ -0.61
APOBEC3A-203ENST00000488758 KIAA1107Q9UPP5 1409 aa11.26□□□□□ -0.61
APOBEC3A-203ENST00000488758 DNMT1P26358 1616 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-203ENST00000488758 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
APOBEC3A-203ENST00000488758 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
APOBEC3A-203ENST00000488758 AKNAQ7Z591 1439 aa11.25□□□□□ -0.61
APOBEC3A-203ENST00000488758 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
APOBEC3A-203ENST00000488758 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
APOBEC3A-203ENST00000488758 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
APOBEC3A-203ENST00000488758 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
APOBEC3A-203ENST00000488758 SYCP2Q9BX26 1530 aa11.24□□□□□ -0.61
APOBEC3A-203ENST00000488758 ARHGEF5Q12774 1597 aa11.24□□□□□ -0.61
APOBEC3A-203ENST00000488758 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
APOBEC3A-203ENST00000488758 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
APOBEC3A-203ENST00000488758 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
APOBEC3A-203ENST00000488758 CFAP74Q9C0B2 1584 aa11.23□□□□□ -0.61
APOBEC3A-203ENST00000488758 MAP3K4Q9Y6R4 1608 aa11.23□□□□□ -0.61
APOBEC3A-203ENST00000488758 HRCP23327 699 aa11.22□□□□□ -0.61
APOBEC3A-203ENST00000488758 ABCC1P33527 1531 aa11.22□□□□□ -0.61
APOBEC3A-203ENST00000488758 SCAPERQ9BY12 1400 aa11.22□□□□□ -0.61
APOBEC3A-203ENST00000488758 ARHGEF12Q9NZN5 1544 aa11.21□□□□□ -0.61
APOBEC3A-203ENST00000488758 NEO1Q92859 1461 aa11.21□□□□□ -0.61
APOBEC3A-203ENST00000488758 C9orf84Q5VXU9 1444 aa11.21□□□□□ -0.61
APOBEC3A-203ENST00000488758 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
APOBEC3A-203ENST00000488758 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
APOBEC3A-203ENST00000488758 HFM1A2PYH4 1435 aa11.2□□□□□ -0.62
APOBEC3A-203ENST00000488758 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
APOBEC3A-203ENST00000488758 SPAG9O60271 1321 aaKnown RBP11.2□□□□□ -0.62
APOBEC3A-203ENST00000488758 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
APOBEC3A-203ENST00000488758 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
APOBEC3A-203ENST00000488758 SHANK2Q9UPX8 1470 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms