RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
ATPAF2-207ENST00000488753 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
ATPAF2-207ENST00000488753 MYO5CQ9NQX4 1742 aa21.22■□□□□ 0.99
ATPAF2-207ENST00000488753 ZFYVE16Q7Z3T8 1539 aa21.22■□□□□ 0.99
ATPAF2-207ENST00000488753 PTPRMP28827 1452 aa21.21■□□□□ 0.99
ATPAF2-207ENST00000488753 BCORL1Q5H9F3 1711 aa21.21■□□□□ 0.99
ATPAF2-207ENST00000488753 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
ATPAF2-207ENST00000488753 YEATS2Q9ULM3 1422 aa21.2■□□□□ 0.98
ATPAF2-207ENST00000488753 ARHGAP5Q13017 1502 aa21.18■□□□□ 0.98
ATPAF2-207ENST00000488753 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
ATPAF2-207ENST00000488753 MADDQ8WXG6 1647 aa21.14■□□□□ 0.97
ATPAF2-207ENST00000488753 ATP10AO60312 1499 aa21.12■□□□□ 0.97
ATPAF2-207ENST00000488753 C9orf84Q5VXU9 1444 aa21.11■□□□□ 0.97
ATPAF2-207ENST00000488753 KDM5CP41229 1560 aa21.1■□□□□ 0.97
ATPAF2-207ENST00000488753 PREX2Q70Z35 1606 aa21.09■□□□□ 0.97
ATPAF2-207ENST00000488753 AFAP1Q8N556 730 aa21.09■□□□□ 0.97
ATPAF2-207ENST00000488753 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
ATPAF2-207ENST00000488753 SIGLEC1Q9BZZ2 1709 aa21.06■□□□□ 0.96
ATPAF2-207ENST00000488753 MLH3Q9UHC1 1453 aa21.06■□□□□ 0.96
ATPAF2-207ENST00000488753 ABCC1P33527 1531 aa21.05■□□□□ 0.96
ATPAF2-207ENST00000488753 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
ATPAF2-207ENST00000488753 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
ATPAF2-207ENST00000488753 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
ATPAF2-207ENST00000488753 TRAPPC8Q9Y2L5 1435 aa21.02■□□□□ 0.96
ATPAF2-207ENST00000488753 GPATCH8Q9UKJ3 1502 aaKnown RBP21.01■□□□□ 0.95
ATPAF2-207ENST00000488753 MLECQ14165 292 aa21.01■□□□□ 0.95
ATPAF2-207ENST00000488753 REREQ9P2R6 1566 aa21.01■□□□□ 0.95
ATPAF2-207ENST00000488753 MTUS2Q5JR59 1369 aa21■□□□□ 0.95
ATPAF2-207ENST00000488753 MYT1LQ9UL68 1186 aa21■□□□□ 0.95
ATPAF2-207ENST00000488753 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
ATPAF2-207ENST00000488753 LMTK3Q96Q04 1460 aa21■□□□□ 0.95
ATPAF2-207ENST00000488753 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
ATPAF2-207ENST00000488753 ITSN2Q9NZM3 1697 aa20.97■□□□□ 0.95
ATPAF2-207ENST00000488753 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
ATPAF2-207ENST00000488753 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.95
ATPAF2-207ENST00000488753 PLEKHH2Q8IVE3 1493 aa20.95■□□□□ 0.94
ATPAF2-207ENST00000488753 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
ATPAF2-207ENST00000488753 ZNF777Q9ULD5 760 aaPredicted RBP20.95■□□□□ 0.94
ATPAF2-207ENST00000488753 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
ATPAF2-207ENST00000488753 AGLP35573 1532 aa20.94■□□□□ 0.94
ATPAF2-207ENST00000488753 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
ATPAF2-207ENST00000488753 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
ATPAF2-207ENST00000488753 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
ATPAF2-207ENST00000488753 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
ATPAF2-207ENST00000488753 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
ATPAF2-207ENST00000488753 SPAG9O60271 1321 aaKnown RBP20.89■□□□□ 0.93
ATPAF2-207ENST00000488753 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
ATPAF2-207ENST00000488753 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
ATPAF2-207ENST00000488753 HNRNPMP52272 730 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATPAF2-207ENST00000488753 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
ATPAF2-207ENST00000488753 HSPA2P54652 639 aa20.84■□□□□ 0.93
ATPAF2-207ENST00000488753 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
ATPAF2-207ENST00000488753 ESF1Q9H501 851 aaKnown RBP20.83■□□□□ 0.93
ATPAF2-207ENST00000488753 CNTLNQ9NXG0 1405 aa20.83■□□□□ 0.93
ATPAF2-207ENST00000488753 ATP7AQ04656 1500 aa20.83■□□□□ 0.92
ATPAF2-207ENST00000488753 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
ATPAF2-207ENST00000488753 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
ATPAF2-207ENST00000488753 INO80Q9ULG1 1556 aaPredicted RBP20.8■□□□□ 0.92
ATPAF2-207ENST00000488753 MBD5Q9P267 1494 aa20.8■□□□□ 0.92
ATPAF2-207ENST00000488753 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
ATPAF2-207ENST00000488753 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
ATPAF2-207ENST00000488753 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
ATPAF2-207ENST00000488753 A2MP01023 1474 aa20.78■□□□□ 0.92
ATPAF2-207ENST00000488753 UHRF1BP1Q6BDS2 1440 aa20.78■□□□□ 0.92
ATPAF2-207ENST00000488753 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
ATPAF2-207ENST00000488753 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
ATPAF2-207ENST00000488753 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
ATPAF2-207ENST00000488753 RSPH4AQ5TD94 716 aa20.75■□□□□ 0.91
ATPAF2-207ENST00000488753 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
ATPAF2-207ENST00000488753 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
ATPAF2-207ENST00000488753 C3P01024 1663 aa20.73■□□□□ 0.91
ATPAF2-207ENST00000488753 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
ATPAF2-207ENST00000488753 FBXO41Q8TF61 875 aa20.72■□□□□ 0.91
ATPAF2-207ENST00000488753 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
ATPAF2-207ENST00000488753 NPATQ14207 1427 aa20.71■□□□□ 0.91
ATPAF2-207ENST00000488753 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
ATPAF2-207ENST00000488753 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
ATPAF2-207ENST00000488753 MROH2AA6NES4 1674 aa20.7■□□□□ 0.9
ATPAF2-207ENST00000488753 ZMYM3Q14202 1370 aa20.7■□□□□ 0.9
ATPAF2-207ENST00000488753 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
ATPAF2-207ENST00000488753 ADGBQ8N7X0 1667 aa20.69■□□□□ 0.9
ATPAF2-207ENST00000488753 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
ATPAF2-207ENST00000488753 GGT6Q6P531 493 aa20.66■□□□□ 0.9
ATPAF2-207ENST00000488753 ARHGEF5Q12774 1597 aa20.64■□□□□ 0.9
ATPAF2-207ENST00000488753 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
ATPAF2-207ENST00000488753 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
ATPAF2-207ENST00000488753 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
ATPAF2-207ENST00000488753 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
ATPAF2-207ENST00000488753 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 CLTCQ00610 1675 aaKnown RBP20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 PTPRTO14522 1441 aa20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 PTPRKQ15262 1439 aa20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
ATPAF2-207ENST00000488753 KIF3BO15066 747 aa20.58■□□□□ 0.89
ATPAF2-207ENST00000488753 CERKQ8TCT0 537 aa20.58■□□□□ 0.89
ATPAF2-207ENST00000488753 NCOA1Q15788 1441 aa20.58■□□□□ 0.88
ATPAF2-207ENST00000488753 APLP2Q06481 763 aa20.56■□□□□ 0.88
ATPAF2-207ENST00000488753 MAST1Q9Y2H9 1570 aa20.54■□□□□ 0.88
ATPAF2-207ENST00000488753 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms