RNA–Protein interactions for RNA: ENST00000488411.1

ZC3H11A-210, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-210ENST00000488411 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
ZC3H11A-210ENST00000488411 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
ZC3H11A-210ENST00000488411 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
ZC3H11A-210ENST00000488411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
ZC3H11A-210ENST00000488411 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
ZC3H11A-210ENST00000488411 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
ZC3H11A-210ENST00000488411 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
ZC3H11A-210ENST00000488411 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
ZC3H11A-210ENST00000488411 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
ZC3H11A-210ENST00000488411 PTGER2P43116 358 aa12.58□□□□□ -0.4
ZC3H11A-210ENST00000488411 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
ZC3H11A-210ENST00000488411 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
ZC3H11A-210ENST00000488411 NLRP6P59044 892 aa12.55□□□□□ -0.4
ZC3H11A-210ENST00000488411 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
ZC3H11A-210ENST00000488411 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
ZC3H11A-210ENST00000488411 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
ZC3H11A-210ENST00000488411 NACADO15069 1562 aa12.48□□□□□ -0.41
ZC3H11A-210ENST00000488411 KHSRPQ92945 711 aaKnown RBP eCLIP12.48□□□□□ -0.41
ZC3H11A-210ENST00000488411 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
ZC3H11A-210ENST00000488411 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
ZC3H11A-210ENST00000488411 KIF3CO14782 793 aa12.45□□□□□ -0.42
ZC3H11A-210ENST00000488411 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
ZC3H11A-210ENST00000488411 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
ZC3H11A-210ENST00000488411 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
ZC3H11A-210ENST00000488411 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
ZC3H11A-210ENST00000488411 PBX2P40425 430 aa12.4□□□□□ -0.42
ZC3H11A-210ENST00000488411 SLC34A2O95436 690 aa12.38□□□□□ -0.43
ZC3H11A-210ENST00000488411 NUDT7P0C024 238 aa12.37□□□□□ -0.43
ZC3H11A-210ENST00000488411 STK25O00506 426 aa12.36□□□□□ -0.43
ZC3H11A-210ENST00000488411 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
ZC3H11A-210ENST00000488411 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
ZC3H11A-210ENST00000488411 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
ZC3H11A-210ENST00000488411 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
ZC3H11A-210ENST00000488411 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
ZC3H11A-210ENST00000488411 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
ZC3H11A-210ENST00000488411 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
ZC3H11A-210ENST00000488411 MYO15BQ96JP2 1530 aa12.26□□□□□ -0.45
ZC3H11A-210ENST00000488411 PSDA5PKW4 1024 aaPredicted RBP12.25□□□□□ -0.45
ZC3H11A-210ENST00000488411 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
ZC3H11A-210ENST00000488411 HCSTQ9UBK5 93 aa12.22□□□□□ -0.45
ZC3H11A-210ENST00000488411 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
ZC3H11A-210ENST00000488411 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
ZC3H11A-210ENST00000488411 BICRAQ9NZM4 1560 aa12.19□□□□□ -0.46
ZC3H11A-210ENST00000488411 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
ZC3H11A-210ENST00000488411 RGL2O15211 777 aa12.19□□□□□ -0.46
ZC3H11A-210ENST00000488411 PPP1R37O75864 691 aa12.18□□□□□ -0.46
ZC3H11A-210ENST00000488411 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
ZC3H11A-210ENST00000488411 PKD2Q13563 968 aa12.16□□□□□ -0.46
ZC3H11A-210ENST00000488411 TK2O00142 265 aa12.15□□□□□ -0.46
ZC3H11A-210ENST00000488411 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
ZC3H11A-210ENST00000488411 HRO43593 1189 aa12.12□□□□□ -0.47
ZC3H11A-210ENST00000488411 FOXK1P85037 733 aa12.12□□□□□ -0.47
ZC3H11A-210ENST00000488411 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
ZC3H11A-210ENST00000488411 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
ZC3H11A-210ENST00000488411 PSEN2P49810 448 aa12.08□□□□□ -0.48
ZC3H11A-210ENST00000488411 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
ZC3H11A-210ENST00000488411 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
ZC3H11A-210ENST00000488411 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
ZC3H11A-210ENST00000488411 TBC1D12O60347 775 aa12.06□□□□□ -0.48
ZC3H11A-210ENST00000488411 SCRIBQ14160 1630 aa12.04□□□□□ -0.48
ZC3H11A-210ENST00000488411 DSG2Q14126 1118 aa12.02□□□□□ -0.49
ZC3H11A-210ENST00000488411 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
ZC3H11A-210ENST00000488411 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
ZC3H11A-210ENST00000488411 STAC3Q96MF2 364 aa12□□□□□ -0.49
ZC3H11A-210ENST00000488411 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
ZC3H11A-210ENST00000488411 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
ZC3H11A-210ENST00000488411 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
ZC3H11A-210ENST00000488411 KCNK17Q96T54 332 aa11.97□□□□□ -0.49
ZC3H11A-210ENST00000488411 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
ZC3H11A-210ENST00000488411 VPS9D1Q9Y2B5 631 aa11.95□□□□□ -0.5
ZC3H11A-210ENST00000488411 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
ZC3H11A-210ENST00000488411 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
ZC3H11A-210ENST00000488411 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
ZC3H11A-210ENST00000488411 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
ZC3H11A-210ENST00000488411 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
ZC3H11A-210ENST00000488411 RGS20O76081 388 aa11.87□□□□□ -0.51
ZC3H11A-210ENST00000488411 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
ZC3H11A-210ENST00000488411 PTPN5P54829 565 aa11.86□□□□□ -0.51
ZC3H11A-210ENST00000488411 BHMG1C9JSJ3 638 aaPredicted RBP11.85□□□□□ -0.51
ZC3H11A-210ENST00000488411 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
ZC3H11A-210ENST00000488411 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
ZC3H11A-210ENST00000488411 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
ZC3H11A-210ENST00000488411 FOSBP53539 338 aa11.83□□□□□ -0.52
ZC3H11A-210ENST00000488411 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
ZC3H11A-210ENST00000488411 PTPREP23469 700 aa11.82□□□□□ -0.52
ZC3H11A-210ENST00000488411 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
ZC3H11A-210ENST00000488411 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
ZC3H11A-210ENST00000488411 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
ZC3H11A-210ENST00000488411 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
ZC3H11A-210ENST00000488411 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
ZC3H11A-210ENST00000488411 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
ZC3H11A-210ENST00000488411 GOLGA8CPA6NN73 597 aa11.77□□□□□ -0.53
ZC3H11A-210ENST00000488411 MRPL50Q8N5N7 158 aaKnown RBP11.77□□□□□ -0.53
ZC3H11A-210ENST00000488411 WNT2BQ93097 391 aa11.77□□□□□ -0.53
ZC3H11A-210ENST00000488411 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
ZC3H11A-210ENST00000488411 A0A0G2JS52 829 aa11.75□□□□□ -0.53
ZC3H11A-210ENST00000488411 PDE4AP27815 886 aa11.75□□□□□ -0.53
ZC3H11A-210ENST00000488411 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
ZC3H11A-210ENST00000488411 EVI5O60447 810 aa11.73□□□□□ -0.53
ZC3H11A-210ENST00000488411 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms