RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
PCYT1A-215ENST00000488235 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
PCYT1A-215ENST00000488235 MADDQ8WXG6 1647 aa18.37■□□□□ 0.53
PCYT1A-215ENST00000488235 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
PCYT1A-215ENST00000488235 ZFYVE16Q7Z3T8 1539 aa18.35■□□□□ 0.53
PCYT1A-215ENST00000488235 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
PCYT1A-215ENST00000488235 CLIP1P30622 1438 aa18.33■□□□□ 0.53
PCYT1A-215ENST00000488235 ARHGAP5Q13017 1502 aa18.32■□□□□ 0.52
PCYT1A-215ENST00000488235 CCDC18Q5T9S5 1454 aa18.31■□□□□ 0.52
PCYT1A-215ENST00000488235 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
PCYT1A-215ENST00000488235 FYCO1Q9BQS8 1478 aa18.3■□□□□ 0.52
PCYT1A-215ENST00000488235 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
PCYT1A-215ENST00000488235 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
PCYT1A-215ENST00000488235 RIMS1Q86UR5 1692 aaKnown RBP18.27■□□□□ 0.52
PCYT1A-215ENST00000488235 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.51
PCYT1A-215ENST00000488235 MLECQ14165 292 aa18.26■□□□□ 0.51
PCYT1A-215ENST00000488235 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
PCYT1A-215ENST00000488235 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
PCYT1A-215ENST00000488235 KDM5CP41229 1560 aa18.25■□□□□ 0.51
PCYT1A-215ENST00000488235 ATP10AO60312 1499 aa18.24■□□□□ 0.51
PCYT1A-215ENST00000488235 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
PCYT1A-215ENST00000488235 C9orf84Q5VXU9 1444 aa18.23■□□□□ 0.51
PCYT1A-215ENST00000488235 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
PCYT1A-215ENST00000488235 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
PCYT1A-215ENST00000488235 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
PCYT1A-215ENST00000488235 ABCC1P33527 1531 aa18.22■□□□□ 0.51
PCYT1A-215ENST00000488235 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
PCYT1A-215ENST00000488235 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
PCYT1A-215ENST00000488235 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
PCYT1A-215ENST00000488235 ABCA6Q8N139 1617 aa18.18■□□□□ 0.5
PCYT1A-215ENST00000488235 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
PCYT1A-215ENST00000488235 MLH3Q9UHC1 1453 aa18.17■□□□□ 0.5
PCYT1A-215ENST00000488235 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
PCYT1A-215ENST00000488235 FER1L4A9Z1Z3 1794 aa18.16■□□□□ 0.5
PCYT1A-215ENST00000488235 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
PCYT1A-215ENST00000488235 HSPA2P54652 639 aa18.15■□□□□ 0.5
PCYT1A-215ENST00000488235 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
PCYT1A-215ENST00000488235 ZNF777Q9ULD5 760 aaPredicted RBP18.14■□□□□ 0.49
PCYT1A-215ENST00000488235 CEBPAP49715 358 aaPredicted RBP18.13■□□□□ 0.49
PCYT1A-215ENST00000488235 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
PCYT1A-215ENST00000488235 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
PCYT1A-215ENST00000488235 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
PCYT1A-215ENST00000488235 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
PCYT1A-215ENST00000488235 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCYT1A-215ENST00000488235 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
PCYT1A-215ENST00000488235 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
PCYT1A-215ENST00000488235 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
PCYT1A-215ENST00000488235 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
PCYT1A-215ENST00000488235 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
PCYT1A-215ENST00000488235 AGLP35573 1532 aa18.06■□□□□ 0.48
PCYT1A-215ENST00000488235 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
PCYT1A-215ENST00000488235 EHBP1L1Q8N3D4 1523 aa18.04■□□□□ 0.48
PCYT1A-215ENST00000488235 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
PCYT1A-215ENST00000488235 INO80Q9ULG1 1556 aaPredicted RBP18.01■□□□□ 0.47
PCYT1A-215ENST00000488235 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
PCYT1A-215ENST00000488235 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
PCYT1A-215ENST00000488235 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
PCYT1A-215ENST00000488235 C3P01024 1663 aa17.99■□□□□ 0.47
PCYT1A-215ENST00000488235 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
PCYT1A-215ENST00000488235 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
PCYT1A-215ENST00000488235 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
PCYT1A-215ENST00000488235 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
PCYT1A-215ENST00000488235 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.47
PCYT1A-215ENST00000488235 A2MP01023 1474 aa17.95■□□□□ 0.46
PCYT1A-215ENST00000488235 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
PCYT1A-215ENST00000488235 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
PCYT1A-215ENST00000488235 FBXO41Q8TF61 875 aa17.92■□□□□ 0.46
PCYT1A-215ENST00000488235 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
PCYT1A-215ENST00000488235 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
PCYT1A-215ENST00000488235 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
PCYT1A-215ENST00000488235 STRCQ7RTU9 1775 aa17.91■□□□□ 0.46
PCYT1A-215ENST00000488235 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
PCYT1A-215ENST00000488235 ZMYM3Q14202 1370 aa17.9■□□□□ 0.46
PCYT1A-215ENST00000488235 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
PCYT1A-215ENST00000488235 GGT6Q6P531 493 aa17.88■□□□□ 0.45
PCYT1A-215ENST00000488235 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
PCYT1A-215ENST00000488235 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
PCYT1A-215ENST00000488235 MROH2AA6NES4 1674 aa17.87■□□□□ 0.45
PCYT1A-215ENST00000488235 CLTCQ00610 1675 aaKnown RBP17.87■□□□□ 0.45
PCYT1A-215ENST00000488235 ADGBQ8N7X0 1667 aa17.86■□□□□ 0.45
PCYT1A-215ENST00000488235 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
PCYT1A-215ENST00000488235 NPATQ14207 1427 aa17.84■□□□□ 0.45
PCYT1A-215ENST00000488235 PTPRKQ15262 1439 aa17.83■□□□□ 0.45
PCYT1A-215ENST00000488235 CERKQ8TCT0 537 aa17.82■□□□□ 0.44
PCYT1A-215ENST00000488235 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
PCYT1A-215ENST00000488235 NCOA1Q15788 1441 aa17.81■□□□□ 0.44
PCYT1A-215ENST00000488235 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
PCYT1A-215ENST00000488235 KIF3BO15066 747 aa17.79■□□□□ 0.44
PCYT1A-215ENST00000488235 CAMSAP1Q5T5Y3 1602 aa17.77■□□□□ 0.44
PCYT1A-215ENST00000488235 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
PCYT1A-215ENST00000488235 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
PCYT1A-215ENST00000488235 PTPRTO14522 1441 aa17.77■□□□□ 0.44
PCYT1A-215ENST00000488235 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
PCYT1A-215ENST00000488235 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
PCYT1A-215ENST00000488235 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
PCYT1A-215ENST00000488235 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
PCYT1A-215ENST00000488235 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
PCYT1A-215ENST00000488235 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
PCYT1A-215ENST00000488235 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
PCYT1A-215ENST00000488235 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms