RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 MADDQ8WXG6 1647 aa28.7■■■□□ 2.19
PDE6B-211ENST00000488061 DENND4BO75064 1496 aaPredicted RBP28.68■■■□□ 2.18
PDE6B-211ENST00000488061 LMTK3Q96Q04 1460 aa28.68■■■□□ 2.18
PDE6B-211ENST00000488061 LOC105371045A0A1W2PR82 267 aa28.68■■■□□ 2.18
PDE6B-211ENST00000488061 RICTORQ6R327 1708 aa28.67■■■□□ 2.18
PDE6B-211ENST00000488061 EFCAB2Q5VUJ9 269 aa28.65■■■□□ 2.18
PDE6B-211ENST00000488061 PREX2Q70Z35 1606 aa28.62■■■□□ 2.17
PDE6B-211ENST00000488061 ZMYM4Q5VZL5 1548 aa28.62■■■□□ 2.17
PDE6B-211ENST00000488061 ARID4BQ4LE39 1312 aaPredicted RBP28.6■■■□□ 2.17
PDE6B-211ENST00000488061 CDC42BPBQ9Y5S2 1711 aa28.6■■■□□ 2.17
PDE6B-211ENST00000488061 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
PDE6B-211ENST00000488061 ARHGAP5Q13017 1502 aa28.59■■■□□ 2.17
PDE6B-211ENST00000488061 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
PDE6B-211ENST00000488061 ARHGEF40Q8TER5 1519 aa28.58■■■□□ 2.17
PDE6B-211ENST00000488061 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.16
PDE6B-211ENST00000488061 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
PDE6B-211ENST00000488061 EHBP1L1Q8N3D4 1523 aa28.55■■■□□ 2.16
PDE6B-211ENST00000488061 POGZQ7Z3K3 1410 aa28.55■■■□□ 2.16
PDE6B-211ENST00000488061 SCAPERQ9BY12 1400 aa28.55■■■□□ 2.16
PDE6B-211ENST00000488061 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
PDE6B-211ENST00000488061 ZNF518AQ6AHZ1 1483 aa28.49■■■□□ 2.15
PDE6B-211ENST00000488061 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
PDE6B-211ENST00000488061 HSPA2P54652 639 aa28.48■■■□□ 2.15
PDE6B-211ENST00000488061 GPATCH8Q9UKJ3 1502 aaKnown RBP28.48■■■□□ 2.15
PDE6B-211ENST00000488061 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
PDE6B-211ENST00000488061 KDM5CP41229 1560 aa28.46■■■□□ 2.15
PDE6B-211ENST00000488061 ABCC1P33527 1531 aa28.46■■■□□ 2.15
PDE6B-211ENST00000488061 SIGLEC1Q9BZZ2 1709 aa28.46■■■□□ 2.15
PDE6B-211ENST00000488061 ZFYVE16Q7Z3T8 1539 aa28.45■■■□□ 2.15
PDE6B-211ENST00000488061 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
PDE6B-211ENST00000488061 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
PDE6B-211ENST00000488061 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
PDE6B-211ENST00000488061 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
PDE6B-211ENST00000488061 PLPPR3Q6T4P5 718 aa28.38■■■□□ 2.13
PDE6B-211ENST00000488061 YEATS2Q9ULM3 1422 aa28.37■■■□□ 2.13
PDE6B-211ENST00000488061 KIAA1107Q9UPP5 1409 aa28.37■■■□□ 2.13
PDE6B-211ENST00000488061 MLH3Q9UHC1 1453 aa28.37■■■□□ 2.13
PDE6B-211ENST00000488061 SAMD9LQ8IVG5 1584 aa28.37■■■□□ 2.13
PDE6B-211ENST00000488061 ARHGEF12Q9NZN5 1544 aa28.35■■■□□ 2.13
PDE6B-211ENST00000488061 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
PDE6B-211ENST00000488061 CERKQ8TCT0 537 aa28.34■■■□□ 2.13
PDE6B-211ENST00000488061 CFDP1Q9UEE9 299 aaPredicted RBP28.34■■■□□ 2.13
PDE6B-211ENST00000488061 ATP10AO60312 1499 aa28.33■■■□□ 2.13
PDE6B-211ENST00000488061 NCOA2Q15596 1464 aa28.32■■■□□ 2.12
PDE6B-211ENST00000488061 AFAP1Q8N556 730 aa28.31■■■□□ 2.12
PDE6B-211ENST00000488061 REREQ9P2R6 1566 aa28.31■■■□□ 2.12
PDE6B-211ENST00000488061 FER1L4A9Z1Z3 1794 aa28.3■■■□□ 2.12
PDE6B-211ENST00000488061 C9orf84Q5VXU9 1444 aa28.3■■■□□ 2.12
PDE6B-211ENST00000488061 TRAPPC8Q9Y2L5 1435 aa28.3■■■□□ 2.12
PDE6B-211ENST00000488061 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
PDE6B-211ENST00000488061 MLECQ14165 292 aa28.27■■■□□ 2.12
PDE6B-211ENST00000488061 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
PDE6B-211ENST00000488061 ZNF777Q9ULD5 760 aaPredicted RBP28.24■■■□□ 2.11
PDE6B-211ENST00000488061 KIDINS220Q9ULH0 1771 aa28.23■■■□□ 2.11
PDE6B-211ENST00000488061 ABCA6Q8N139 1617 aa28.21■■■□□ 2.11
PDE6B-211ENST00000488061 APLP2Q06481 763 aa28.2■■■□□ 2.1
PDE6B-211ENST00000488061 AGLP35573 1532 aa28.18■■■□□ 2.1
PDE6B-211ENST00000488061 PREX1Q8TCU6 1659 aa28.17■■■□□ 2.1
PDE6B-211ENST00000488061 MBD5Q9P267 1494 aa28.17■■■□□ 2.1
PDE6B-211ENST00000488061 RSPH4AQ5TD94 716 aa28.17■■■□□ 2.1
PDE6B-211ENST00000488061 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
PDE6B-211ENST00000488061 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
PDE6B-211ENST00000488061 KANK4Q5T7N3 995 aaPredicted RBP28.15■■■□□ 2.1
PDE6B-211ENST00000488061 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
PDE6B-211ENST00000488061 ATP7AQ04656 1500 aa28.14■■■□□ 2.1
PDE6B-211ENST00000488061 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.1
PDE6B-211ENST00000488061 MIA2Q96PC5 1412 aa28.14■■■□□ 2.1
PDE6B-211ENST00000488061 STRCQ7RTU9 1775 aa28.12■■■□□ 2.09
PDE6B-211ENST00000488061 RTEL1-TNFRSF6BF6WH68 1400 aa28.12■■■□□ 2.09
PDE6B-211ENST00000488061 ILDR2Q71H61 639 aa28.12■■■□□ 2.09
PDE6B-211ENST00000488061 CAMSAP2Q08AD1 1489 aa28.12■■■□□ 2.09
PDE6B-211ENST00000488061 CEBPAP49715 358 aaPredicted RBP28.11■■■□□ 2.09
PDE6B-211ENST00000488061 ARHGEF5Q12774 1597 aa28.1■■■□□ 2.09
PDE6B-211ENST00000488061 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
PDE6B-211ENST00000488061 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
PDE6B-211ENST00000488061 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
PDE6B-211ENST00000488061 DISP3Q9P2K9 1392 aa28.08■■■□□ 2.09
PDE6B-211ENST00000488061 ADGBQ8N7X0 1667 aa28.06■■■□□ 2.08
PDE6B-211ENST00000488061 PLXNC1O60486 1568 aa28.04■■■□□ 2.08
PDE6B-211ENST00000488061 A2MP01023 1474 aa28.01■■■□□ 2.07
PDE6B-211ENST00000488061 SOCS7O14512 581 aa28■■■□□ 2.07
PDE6B-211ENST00000488061 SETD1BQ9UPS6 1966 aaKnown RBP28■■■□□ 2.07
PDE6B-211ENST00000488061 UHRF1BP1Q6BDS2 1440 aa28■■■□□ 2.07
PDE6B-211ENST00000488061 DMRT2Q9Y5R5 561 aa27.99■■■□□ 2.07
PDE6B-211ENST00000488061 MAST1Q9Y2H9 1570 aa27.97■■■□□ 2.07
PDE6B-211ENST00000488061 TSPY4P0CV99 314 aa27.94■■■□□ 2.06
PDE6B-211ENST00000488061 TSPY10P0CW01 314 aa27.94■■■□□ 2.06
PDE6B-211ENST00000488061 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
PDE6B-211ENST00000488061 PTPRTO14522 1441 aa27.92■■■□□ 2.06
PDE6B-211ENST00000488061 C3P01024 1663 aa27.91■■■□□ 2.06
PDE6B-211ENST00000488061 SPATA31D1Q6ZQQ2 1576 aa27.91■■■□□ 2.06
PDE6B-211ENST00000488061 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
PDE6B-211ENST00000488061 PTPN23Q9H3S7 1636 aa27.91■■■□□ 2.06
PDE6B-211ENST00000488061 TCOF1Q13428 1488 aaKnown RBP27.9■■■□□ 2.06
PDE6B-211ENST00000488061 PPP6R1Q9UPN7 881 aa27.9■■■□□ 2.06
PDE6B-211ENST00000488061 FGD6Q6ZV73 1430 aa27.9■■■□□ 2.06
PDE6B-211ENST00000488061 MROH2AA6NES4 1674 aa27.88■■■□□ 2.05
PDE6B-211ENST00000488061 LTBP4Q8N2S1 1624 aa27.87■■■□□ 2.05
PDE6B-211ENST00000488061 ESF1Q9H501 851 aaKnown RBP27.86■■■□□ 2.05
PDE6B-211ENST00000488061 SHANK2Q9UPX8 1470 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms