RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
HFM1-208ENST00000488023 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.971e-12■■■■■ 51.6
HFM1-208ENST00000488023 HCSTQ9UBK5 93 aa9.01□□□□□ -0.97
HFM1-208ENST00000488023 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
HFM1-208ENST00000488023 PBX2P40425 430 aa8.95□□□□□ -0.98
HFM1-208ENST00000488023 POTEEQ6S8J3 1075 aa8.95□□□□□ -0.98
HFM1-208ENST00000488023 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
HFM1-208ENST00000488023 MS4A4AQ96JQ5 239 aa8.92□□□□□ -0.98
HFM1-208ENST00000488023 SOX12O15370 315 aa8.88□□□□□ -0.99
HFM1-208ENST00000488023 TRIM41Q8WV44 630 aa8.88□□□□□ -0.99
HFM1-208ENST00000488023 NUDT7P0C024 238 aa8.87□□□□□ -0.99
HFM1-208ENST00000488023 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
HFM1-208ENST00000488023 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
HFM1-208ENST00000488023 PHF8Q9UPP1 1060 aa8.85□□□□□ -0.99
HFM1-208ENST00000488023 IRX2Q9BZI1 471 aaPredicted RBP8.81□□□□□ -1
HFM1-208ENST00000488023 ARHGAP33O14559 1287 aa8.8□□□□□ -1
HFM1-208ENST00000488023 RGS20O76081 388 aa8.8□□□□□ -1
HFM1-208ENST00000488023 HRO43593 1189 aa8.79□□□□□ -1
HFM1-208ENST00000488023 PCDHGA4Q9Y5G9 962 aa8.78□□□□□ -1
HFM1-208ENST00000488023 RIOK3O14730 519 aaKnown RBP8.78□□□□□ -1
HFM1-208ENST00000488023 KIF3CO14782 793 aa8.78□□□□□ -1
HFM1-208ENST00000488023 TK2O00142 265 aa8.77□□□□□ -1.01
HFM1-208ENST00000488023 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
HFM1-208ENST00000488023 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
HFM1-208ENST00000488023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
HFM1-208ENST00000488023 C2orf72A6NCS6 295 aa8.75□□□□□ -1.01
HFM1-208ENST00000488023 SLC34A2O95436 690 aa8.75□□□□□ -1.01
HFM1-208ENST00000488023 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
HFM1-208ENST00000488023 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
HFM1-208ENST00000488023 VGFO15240 615 aaPredicted RBP8.73□□□□□ -1.01
HFM1-208ENST00000488023 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
HFM1-208ENST00000488023 PSEN2P49810 448 aa8.71□□□□□ -1.02
HFM1-208ENST00000488023 NLRP6P59044 892 aa8.7□□□□□ -1.02
HFM1-208ENST00000488023 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
HFM1-208ENST00000488023 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
HFM1-208ENST00000488023 A0A0G2JS52 829 aa8.68□□□□□ -1.02
HFM1-208ENST00000488023 KDM4FA0A1W2PPD8 638 aa8.66□□□□□ -1.02
HFM1-208ENST00000488023 PTPN5P54829 565 aa8.66□□□□□ -1.02
HFM1-208ENST00000488023 STAC3Q96MF2 364 aa8.65□□□□□ -1.02
HFM1-208ENST00000488023 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
HFM1-208ENST00000488023 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
HFM1-208ENST00000488023 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
HFM1-208ENST00000488023 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
HFM1-208ENST00000488023 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
HFM1-208ENST00000488023 PPP4R3BQ5MIZ7 849 aa8.58□□□□□ -1.04
HFM1-208ENST00000488023 Q6ZNB5 142 aa8.58□□□□□ -1.04
HFM1-208ENST00000488023 VPS9D1Q9Y2B5 631 aa8.58□□□□□ -1.04
HFM1-208ENST00000488023 THSD4Q6ZMP0 1018 aa8.56□□□□□ -1.04
HFM1-208ENST00000488023 PTCD2Q8WV60 388 aaKnown RBP8.56□□□□□ -1.04
HFM1-208ENST00000488023 KCNK17Q96T54 332 aa8.56□□□□□ -1.04
HFM1-208ENST00000488023 STK25O00506 426 aa8.55□□□□□ -1.04
HFM1-208ENST00000488023 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
HFM1-208ENST00000488023 KCNH8Q96L42 1107 aa8.5□□□□□ -1.05
HFM1-208ENST00000488023 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
HFM1-208ENST00000488023 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
HFM1-208ENST00000488023 RGL2O15211 777 aa8.48□□□□□ -1.05
HFM1-208ENST00000488023 LCE2BO14633 110 aa8.47□□□□□ -1.05
HFM1-208ENST00000488023 SLC24A1O60721 1099 aa8.47□□□□□ -1.05
HFM1-208ENST00000488023 PKD2Q13563 968 aa8.47□□□□□ -1.05
HFM1-208ENST00000488023 WNT2BQ93097 391 aa8.47□□□□□ -1.05
HFM1-208ENST00000488023 GOLGA8CPA6NN73 597 aa8.45□□□□□ -1.06
HFM1-208ENST00000488023 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
HFM1-208ENST00000488023 PLPP6Q8IY26 295 aa8.43□□□□□ -1.06
HFM1-208ENST00000488023 PPP1R37O75864 691 aa8.43□□□□□ -1.06
HFM1-208ENST00000488023 TBC1D12O60347 775 aa8.42□□□□□ -1.06
HFM1-208ENST00000488023 FOXK1P85037 733 aa8.42□□□□□ -1.06
HFM1-208ENST00000488023 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
HFM1-208ENST00000488023 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
HFM1-208ENST00000488023 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
HFM1-208ENST00000488023 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.07
HFM1-208ENST00000488023 LAPTM4AQ15012 233 aa8.4□□□□□ -1.07
HFM1-208ENST00000488023 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.07
HFM1-208ENST00000488023 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.07
HFM1-208ENST00000488023 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
HFM1-208ENST00000488023 PTPREP23469 700 aa8.36□□□□□ -1.07
HFM1-208ENST00000488023 DSG2Q14126 1118 aa8.36□□□□□ -1.07
HFM1-208ENST00000488023 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
HFM1-208ENST00000488023 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
HFM1-208ENST00000488023 GFRA3O60609 400 aa8.34□□□□□ -1.08
HFM1-208ENST00000488023 FOSBP53539 338 aa8.33□□□□□ -1.08
HFM1-208ENST00000488023 OXER1Q8TDS5 423 aa8.33□□□□□ -1.08
HFM1-208ENST00000488023 RTN4Q9NQC3 1192 aaKnown RBP8.33□□□□□ -1.08
HFM1-208ENST00000488023 KCNC4Q03721 635 aa8.3□□□□□ -1.08
HFM1-208ENST00000488023 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
HFM1-208ENST00000488023 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
HFM1-208ENST00000488023 BCAMP50895 628 aa8.28□□□□□ -1.08
HFM1-208ENST00000488023 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
HFM1-208ENST00000488023 UPF1Q92900 1129 aaKnown RBP eCLIP8.27□□□□□ -1.08
HFM1-208ENST00000488023 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
HFM1-208ENST00000488023 SOWAHBA6NEL2 793 aa8.25□□□□□ -1.09
HFM1-208ENST00000488023 ZNF787Q6DD87 383 aa8.25□□□□□ -1.09
HFM1-208ENST00000488023 NYAP1Q6ZVC0 841 aa8.25□□□□□ -1.09
HFM1-208ENST00000488023 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
HFM1-208ENST00000488023 ZDHHC16Q969W1 377 aa8.24□□□□□ -1.09
HFM1-208ENST00000488023 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
HFM1-208ENST00000488023 ZNF775Q96BV0 537 aaPredicted RBP8.24□□□□□ -1.09
HFM1-208ENST00000488023 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
HFM1-208ENST00000488023 RABGEF1Q9UJ41 708 aa8.24□□□□□ -1.09
HFM1-208ENST00000488023 CHGAP10645 457 aaKnown RBP8.23□□□□□ -1.09
HFM1-208ENST00000488023 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms