RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.42
SCAP-212ENST00000487942 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
SCAP-212ENST00000487942 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
SCAP-212ENST00000487942 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
SCAP-212ENST00000487942 ABCA9Q8IUA7 1624 aa12.43□□□□□ -0.42
SCAP-212ENST00000487942 CD109Q6YHK3 1445 aa12.43□□□□□ -0.42
SCAP-212ENST00000487942 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
SCAP-212ENST00000487942 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
SCAP-212ENST00000487942 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
SCAP-212ENST00000487942 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
SCAP-212ENST00000487942 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
SCAP-212ENST00000487942 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
SCAP-212ENST00000487942 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
SCAP-212ENST00000487942 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
SCAP-212ENST00000487942 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
SCAP-212ENST00000487942 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
SCAP-212ENST00000487942 TTC37Q6PGP7 1564 aa12.34□□□□□ -0.43
SCAP-212ENST00000487942 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
SCAP-212ENST00000487942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCAP-212ENST00000487942 HECW1Q76N89 1606 aa12.32□□□□□ -0.44
SCAP-212ENST00000487942 FRMPD1Q5SYB0 1578 aa12.31□□□□□ -0.44
SCAP-212ENST00000487942 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SCAP-212ENST00000487942 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SCAP-212ENST00000487942 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
SCAP-212ENST00000487942 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
SCAP-212ENST00000487942 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
SCAP-212ENST00000487942 NEO1Q92859 1461 aa12.28□□□□□ -0.44
SCAP-212ENST00000487942 KIF14Q15058 1648 aa12.28□□□□□ -0.44
SCAP-212ENST00000487942 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
SCAP-212ENST00000487942 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
SCAP-212ENST00000487942 RAPGEF3O95398 923 aa12.27□□□□□ -0.45
SCAP-212ENST00000487942 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.45
SCAP-212ENST00000487942 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
SCAP-212ENST00000487942 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
SCAP-212ENST00000487942 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
SCAP-212ENST00000487942 FANCAO15360 1455 aa12.24□□□□□ -0.45
SCAP-212ENST00000487942 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
SCAP-212ENST00000487942 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
SCAP-212ENST00000487942 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
SCAP-212ENST00000487942 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
SCAP-212ENST00000487942 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
SCAP-212ENST00000487942 ADAMTSL3P82987 1691 aa12.22□□□□□ -0.45
SCAP-212ENST00000487942 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
SCAP-212ENST00000487942 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
SCAP-212ENST00000487942 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
SCAP-212ENST00000487942 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
SCAP-212ENST00000487942 PLCH2O75038 1416 aa12.19□□□□□ -0.46
SCAP-212ENST00000487942 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
SCAP-212ENST00000487942 CASKIN1Q8WXD9 1431 aa12.19□□□□□ -0.46
SCAP-212ENST00000487942 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
SCAP-212ENST00000487942 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
SCAP-212ENST00000487942 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
SCAP-212ENST00000487942 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
SCAP-212ENST00000487942 CLIP1P30622 1438 aa12.17□□□□□ -0.46
SCAP-212ENST00000487942 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
SCAP-212ENST00000487942 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
SCAP-212ENST00000487942 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
SCAP-212ENST00000487942 YEATS2Q9ULM3 1422 aa12.15□□□□□ -0.46
SCAP-212ENST00000487942 CDK11AQ9UQ88 783 aaPredicted RBP12.15□□□□□ -0.46
SCAP-212ENST00000487942 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
SCAP-212ENST00000487942 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.46
SCAP-212ENST00000487942 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
SCAP-212ENST00000487942 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
SCAP-212ENST00000487942 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
SCAP-212ENST00000487942 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
SCAP-212ENST00000487942 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
SCAP-212ENST00000487942 PTPRMP28827 1452 aa12.12□□□□□ -0.47
SCAP-212ENST00000487942 FER1L4A9Z1Z3 1794 aa12.12□□□□□ -0.47
SCAP-212ENST00000487942 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
SCAP-212ENST00000487942 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
SCAP-212ENST00000487942 KDM5CP41229 1560 aa12.09□□□□□ -0.47
SCAP-212ENST00000487942 MAGI2Q86UL8 1455 aa12.09□□□□□ -0.47
SCAP-212ENST00000487942 ABCC1P33527 1531 aa12.09□□□□□ -0.47
SCAP-212ENST00000487942 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
SCAP-212ENST00000487942 ARHGEF12Q9NZN5 1544 aa12.08□□□□□ -0.48
SCAP-212ENST00000487942 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCAP-212ENST00000487942 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
SCAP-212ENST00000487942 CEP162Q5TB80 1403 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 SAMD9LQ8IVG5 1584 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 KIDINS220Q9ULH0 1771 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
SCAP-212ENST00000487942 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
SCAP-212ENST00000487942 ATP10AO60312 1499 aa12.06□□□□□ -0.48
SCAP-212ENST00000487942 TRAPPC8Q9Y2L5 1435 aa12.05□□□□□ -0.48
SCAP-212ENST00000487942 C9orf84Q5VXU9 1444 aa12.04□□□□□ -0.48
SCAP-212ENST00000487942 LOC105371045A0A1W2PR82 267 aa12.04□□□□□ -0.48
SCAP-212ENST00000487942 MLECQ14165 292 aa12.04□□□□□ -0.48
SCAP-212ENST00000487942 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
SCAP-212ENST00000487942 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.48
SCAP-212ENST00000487942 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
SCAP-212ENST00000487942 ZNF777Q9ULD5 760 aaPredicted RBP12.01□□□□□ -0.49
SCAP-212ENST00000487942 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
SCAP-212ENST00000487942 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
SCAP-212ENST00000487942 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
SCAP-212ENST00000487942 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
SCAP-212ENST00000487942 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
SCAP-212ENST00000487942 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
SCAP-212ENST00000487942 EHBP1L1Q8N3D4 1523 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms