RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P36-201ENST00000487709 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
HMGB1P36-201ENST00000487709 NLRP6P59044 892 aa11.47□□□□□ -0.57
HMGB1P36-201ENST00000487709 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
HMGB1P36-201ENST00000487709 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
HMGB1P36-201ENST00000487709 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
HMGB1P36-201ENST00000487709 STK25O00506 426 aa11.43□□□□□ -0.58
HMGB1P36-201ENST00000487709 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
HMGB1P36-201ENST00000487709 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
HMGB1P36-201ENST00000487709 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
HMGB1P36-201ENST00000487709 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
HMGB1P36-201ENST00000487709 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMGB1P36-201ENST00000487709 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
HMGB1P36-201ENST00000487709 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
HMGB1P36-201ENST00000487709 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
HMGB1P36-201ENST00000487709 RGL2O15211 777 aa11.32□□□□□ -0.6
HMGB1P36-201ENST00000487709 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
HMGB1P36-201ENST00000487709 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
HMGB1P36-201ENST00000487709 KIF3CO14782 793 aa11.29□□□□□ -0.6
HMGB1P36-201ENST00000487709 PKD2Q13563 968 aa11.29□□□□□ -0.6
HMGB1P36-201ENST00000487709 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
HMGB1P36-201ENST00000487709 NUDT7P0C024 238 aa11.27□□□□□ -0.61
HMGB1P36-201ENST00000487709 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
HMGB1P36-201ENST00000487709 PPP1R37O75864 691 aa11.21□□□□□ -0.61
HMGB1P36-201ENST00000487709 PTGER2P43116 358 aa11.21□□□□□ -0.61
HMGB1P36-201ENST00000487709 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMGB1P36-201ENST00000487709 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
HMGB1P36-201ENST00000487709 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
HMGB1P36-201ENST00000487709 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
HMGB1P36-201ENST00000487709 SLC34A2O95436 690 aa11.16□□□□□ -0.62
HMGB1P36-201ENST00000487709 PBX2P40425 430 aa11.14□□□□□ -0.63
HMGB1P36-201ENST00000487709 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
HMGB1P36-201ENST00000487709 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
HMGB1P36-201ENST00000487709 HS6ST3Q8IZP7 471 aa11.06□□□□□ -0.64
HMGB1P36-201ENST00000487709 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 FOXK1P85037 733 aa11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 ADGRD1Q6QNK2 874 aa11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 PTCD2Q8WV60 388 aaKnown RBP11.03□□□□□ -0.64
HMGB1P36-201ENST00000487709 DSG2Q14126 1118 aa11.02□□□□□ -0.65
HMGB1P36-201ENST00000487709 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
HMGB1P36-201ENST00000487709 KDM4FA0A1W2PPD8 638 aa11□□□□□ -0.65
HMGB1P36-201ENST00000487709 PSEN2P49810 448 aa11□□□□□ -0.65
HMGB1P36-201ENST00000487709 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
HMGB1P36-201ENST00000487709 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
HMGB1P36-201ENST00000487709 TBC1D12O60347 775 aa10.96□□□□□ -0.65
HMGB1P36-201ENST00000487709 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
HMGB1P36-201ENST00000487709 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGB1P36-201ENST00000487709 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
HMGB1P36-201ENST00000487709 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
HMGB1P36-201ENST00000487709 KCNK17Q96T54 332 aa10.93□□□□□ -0.66
HMGB1P36-201ENST00000487709 TK2O00142 265 aa10.92□□□□□ -0.66
HMGB1P36-201ENST00000487709 HRO43593 1189 aa10.9□□□□□ -0.66
HMGB1P36-201ENST00000487709 KCTD12Q96CX2 325 aaKnown RBP10.89□□□□□ -0.67
HMGB1P36-201ENST00000487709 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
HMGB1P36-201ENST00000487709 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
HMGB1P36-201ENST00000487709 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
HMGB1P36-201ENST00000487709 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
HMGB1P36-201ENST00000487709 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
HMGB1P36-201ENST00000487709 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
HMGB1P36-201ENST00000487709 CRISPLD2Q9H0B8 497 aa10.85□□□□□ -0.67
HMGB1P36-201ENST00000487709 DNAJC5Q9H3Z4 198 aa10.83□□□□□ -0.68
HMGB1P36-201ENST00000487709 VPS9D1Q9Y2B5 631 aa10.82□□□□□ -0.68
HMGB1P36-201ENST00000487709 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
HMGB1P36-201ENST00000487709 PDE4AP27815 886 aa10.78□□□□□ -0.68
HMGB1P36-201ENST00000487709 PTPN5P54829 565 aa10.78□□□□□ -0.68
HMGB1P36-201ENST00000487709 BCL2L12Q9HB09 334 aa10.78□□□□□ -0.68
HMGB1P36-201ENST00000487709 FOSBP53539 338 aa10.77□□□□□ -0.69
HMGB1P36-201ENST00000487709 PTPREP23469 700 aa10.75□□□□□ -0.69
HMGB1P36-201ENST00000487709 EVI5O60447 810 aa10.74□□□□□ -0.69
HMGB1P36-201ENST00000487709 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
HMGB1P36-201ENST00000487709 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
HMGB1P36-201ENST00000487709 JPH4Q96JJ6 628 aa10.73□□□□□ -0.69
HMGB1P36-201ENST00000487709 DDX27Q96GQ7 796 aaKnown RBP10.72□□□□□ -0.69
HMGB1P36-201ENST00000487709 GOLGA8CPA6NN73 597 aa10.71□□□□□ -0.69
HMGB1P36-201ENST00000487709 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
HMGB1P36-201ENST00000487709 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
HMGB1P36-201ENST00000487709 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
HMGB1P36-201ENST00000487709 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
HMGB1P36-201ENST00000487709 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
HMGB1P36-201ENST00000487709 BHMG1C9JSJ3 638 aaPredicted RBP10.69□□□□□ -0.7
HMGB1P36-201ENST00000487709 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
HMGB1P36-201ENST00000487709 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
HMGB1P36-201ENST00000487709 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
HMGB1P36-201ENST00000487709 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
HMGB1P36-201ENST00000487709 WNT2BQ93097 391 aa10.68□□□□□ -0.7
HMGB1P36-201ENST00000487709 MFSD10Q14728 455 aa10.65□□□□□ -0.7
HMGB1P36-201ENST00000487709 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
HMGB1P36-201ENST00000487709 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
HMGB1P36-201ENST00000487709 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
HMGB1P36-201ENST00000487709 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
HMGB1P36-201ENST00000487709 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
HMGB1P36-201ENST00000487709 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
HMGB1P36-201ENST00000487709 COL9A1P20849 921 aa10.58□□□□□ -0.72
HMGB1P36-201ENST00000487709 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
HMGB1P36-201ENST00000487709 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
HMGB1P36-201ENST00000487709 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
HMGB1P36-201ENST00000487709 A0A0G2JS52 829 aa10.54□□□□□ -0.72
HMGB1P36-201ENST00000487709 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms