RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZFYVE16Q7Z3T8 1539 aa38.24■■■■□ 3.71
PLOD3-215ENST00000487563 FYCO1Q9BQS8 1478 aa38.24■■■■□ 3.71
PLOD3-215ENST00000487563 HECW2Q9P2P5 1572 aa38.23■■■■□ 3.71
PLOD3-215ENST00000487563 POGZQ7Z3K3 1410 aa38.23■■■■□ 3.71
PLOD3-215ENST00000487563 ARHGAP5Q13017 1502 aa38.22■■■■□ 3.71
PLOD3-215ENST00000487563 BCORL1Q5H9F3 1711 aa38.22■■■■□ 3.71
PLOD3-215ENST00000487563 MAGI2Q86UL8 1455 aa38.2■■■■□ 3.71
PLOD3-215ENST00000487563 YEATS2Q9ULM3 1422 aa38.17■■■■□ 3.7
PLOD3-215ENST00000487563 PTPRMP28827 1452 aa38.15■■■■□ 3.7
PLOD3-215ENST00000487563 MADDQ8WXG6 1647 aa38.13■■■■□ 3.69
PLOD3-215ENST00000487563 ZNF518AQ6AHZ1 1483 aa38.08■■■■□ 3.69
PLOD3-215ENST00000487563 PREX2Q70Z35 1606 aa38.07■■■■□ 3.68
PLOD3-215ENST00000487563 CDC42BPBQ9Y5S2 1711 aa38.06■■■■□ 3.68
PLOD3-215ENST00000487563 RIMS1Q86UR5 1692 aaKnown RBP38.02■■■■□ 3.68
PLOD3-215ENST00000487563 SIGLEC1Q9BZZ2 1709 aa38■■■■□ 3.67
PLOD3-215ENST00000487563 ATP10AO60312 1499 aa37.99■■■■□ 3.67
PLOD3-215ENST00000487563 MYT1LQ9UL68 1186 aa37.98■■■■□ 3.67
PLOD3-215ENST00000487563 KDM5CP41229 1560 aa37.97■■■■□ 3.67
PLOD3-215ENST00000487563 C9orf84Q5VXU9 1444 aa37.97■■■■□ 3.67
PLOD3-215ENST00000487563 AFAP1Q8N556 730 aa37.97■■■■□ 3.67
PLOD3-215ENST00000487563 MLECQ14165 292 aa37.95■■■■□ 3.67
PLOD3-215ENST00000487563 CDC42BPAQ5VT25 1732 aa37.95■■■■□ 3.67
PLOD3-215ENST00000487563 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
PLOD3-215ENST00000487563 ABCC1P33527 1531 aa37.94■■■■□ 3.66
PLOD3-215ENST00000487563 ITSN2Q9NZM3 1697 aa37.89■■■■□ 3.66
PLOD3-215ENST00000487563 MTUS2Q5JR59 1369 aa37.87■■■■□ 3.65
PLOD3-215ENST00000487563 FER1L4A9Z1Z3 1794 aa37.86■■■■□ 3.65
PLOD3-215ENST00000487563 PLPPR3Q6T4P5 718 aa37.86■■■■□ 3.65
PLOD3-215ENST00000487563 TRAPPC8Q9Y2L5 1435 aa37.86■■■■□ 3.65
PLOD3-215ENST00000487563 ZNF777Q9ULD5 760 aaPredicted RBP37.85■■■■□ 3.65
PLOD3-215ENST00000487563 ARHGEF12Q9NZN5 1544 aa37.85■■■■□ 3.65
PLOD3-215ENST00000487563 DIP2CQ9Y2E4 1556 aa37.83■■■■□ 3.65
PLOD3-215ENST00000487563 MLH3Q9UHC1 1453 aa37.83■■■■□ 3.65
PLOD3-215ENST00000487563 GPATCH8Q9UKJ3 1502 aaKnown RBP37.82■■■■□ 3.64
PLOD3-215ENST00000487563 ABCA6Q8N139 1617 aa37.79■■■■□ 3.64
PLOD3-215ENST00000487563 CCNB3Q8WWL7 1395 aa37.79■■■■□ 3.64
PLOD3-215ENST00000487563 SAMD9LQ8IVG5 1584 aa37.78■■■■□ 3.64
PLOD3-215ENST00000487563 EHBP1L1Q8N3D4 1523 aa37.75■■■■□ 3.63
PLOD3-215ENST00000487563 SYCP2Q9BX26 1530 aa37.75■■■■□ 3.63
PLOD3-215ENST00000487563 REREQ9P2R6 1566 aa37.75■■■■□ 3.63
PLOD3-215ENST00000487563 LMTK3Q96Q04 1460 aa37.74■■■■□ 3.63
PLOD3-215ENST00000487563 CFDP1Q9UEE9 299 aaPredicted RBP37.74■■■■□ 3.63
PLOD3-215ENST00000487563 PLEKHH2Q8IVE3 1493 aa37.69■■■■□ 3.62
PLOD3-215ENST00000487563 KIDINS220Q9ULH0 1771 aa37.68■■■■□ 3.62
PLOD3-215ENST00000487563 HNRNPMP52272 730 aaKnown RBP eCLIP37.66■■■■□ 3.62
PLOD3-215ENST00000487563 LOC105371045A0A1W2PR82 267 aa37.65■■■■□ 3.62
PLOD3-215ENST00000487563 TIAM1Q13009 1591 aa37.63■■■■□ 3.62
PLOD3-215ENST00000487563 SPAG9O60271 1321 aaKnown RBP37.63■■■■□ 3.62
PLOD3-215ENST00000487563 KIAA1107Q9UPP5 1409 aa37.63■■■■□ 3.61
PLOD3-215ENST00000487563 AGLP35573 1532 aa37.62■■■■□ 3.61
PLOD3-215ENST00000487563 ILDR1Q86SU0 546 aaPredicted RBP37.56■■■■□ 3.6
PLOD3-215ENST00000487563 ESF1Q9H501 851 aaKnown RBP37.56■■■■□ 3.6
PLOD3-215ENST00000487563 ATP7AQ04656 1500 aa37.56■■■■□ 3.6
PLOD3-215ENST00000487563 CEBPAP49715 358 aaPredicted RBP37.55■■■■□ 3.6
PLOD3-215ENST00000487563 HSPA2P54652 639 aa37.55■■■■□ 3.6
PLOD3-215ENST00000487563 VPS8Q8N3P4 1428 aa37.53■■■■□ 3.6
PLOD3-215ENST00000487563 SUPT6HQ7KZ85 1726 aaKnown RBP37.52■■■■□ 3.6
PLOD3-215ENST00000487563 INO80Q9ULG1 1556 aaPredicted RBP37.51■■■■□ 3.6
PLOD3-215ENST00000487563 ZNF644Q9H582 1327 aaPredicted RBP37.49■■■■□ 3.59
PLOD3-215ENST00000487563 NCOA2Q15596 1464 aa37.49■■■■□ 3.59
PLOD3-215ENST00000487563 PREX1Q8TCU6 1659 aa37.49■■■■□ 3.59
PLOD3-215ENST00000487563 C3P01024 1663 aa37.42■■■■□ 3.58
PLOD3-215ENST00000487563 CNTLNQ9NXG0 1405 aa37.42■■■■□ 3.58
PLOD3-215ENST00000487563 A2MP01023 1474 aa37.41■■■■□ 3.58
PLOD3-215ENST00000487563 MBD5Q9P267 1494 aa37.39■■■■□ 3.58
PLOD3-215ENST00000487563 UHRF1BP1Q6BDS2 1440 aa37.39■■■■□ 3.58
PLOD3-215ENST00000487563 PLXNC1O60486 1568 aa37.38■■■■□ 3.57
PLOD3-215ENST00000487563 LRRC9Q6ZRR7 1453 aa37.36■■■■□ 3.57
PLOD3-215ENST00000487563 ADGBQ8N7X0 1667 aa37.35■■■■□ 3.57
PLOD3-215ENST00000487563 CAMSAP2Q08AD1 1489 aa37.35■■■■□ 3.57
PLOD3-215ENST00000487563 SETD1BQ9UPS6 1966 aaKnown RBP37.32■■■■□ 3.56
PLOD3-215ENST00000487563 CCDC141Q6ZP82 1450 aa37.31■■■■□ 3.56
PLOD3-215ENST00000487563 RTEL1-TNFRSF6BF6WH68 1400 aa37.3■■■■□ 3.56
PLOD3-215ENST00000487563 MROH2AA6NES4 1674 aa37.29■■■■□ 3.56
PLOD3-215ENST00000487563 MAP3K1Q13233 1512 aa37.27■■■■□ 3.56
PLOD3-215ENST00000487563 GGT6Q6P531 493 aa37.25■■■■□ 3.55
PLOD3-215ENST00000487563 CLTCQ00610 1675 aaKnown RBP37.23■■■■□ 3.55
PLOD3-215ENST00000487563 RSPH4AQ5TD94 716 aa37.23■■■■□ 3.55
PLOD3-215ENST00000487563 ZMYM3Q14202 1370 aa37.21■■■■□ 3.55
PLOD3-215ENST00000487563 KANK4Q5T7N3 995 aaPredicted RBP37.2■■■■□ 3.55
PLOD3-215ENST00000487563 ARHGEF5Q12774 1597 aa37.18■■■■□ 3.54
PLOD3-215ENST00000487563 FBXO41Q8TF61 875 aa37.18■■■■□ 3.54
PLOD3-215ENST00000487563 NPATQ14207 1427 aa37.18■■■■□ 3.54
PLOD3-215ENST00000487563 DHX29Q7Z478 1369 aaKnown RBP37.17■■■■□ 3.54
PLOD3-215ENST00000487563 APLP2Q06481 763 aa37.14■■■■□ 3.54
PLOD3-215ENST00000487563 TSPY4P0CV99 314 aa37.13■■■■□ 3.53
PLOD3-215ENST00000487563 TSPY10P0CW01 314 aa37.13■■■■□ 3.53
PLOD3-215ENST00000487563 PPP6R1Q9UPN7 881 aa37.13■■■■□ 3.53
PLOD3-215ENST00000487563 DMRT2Q9Y5R5 561 aa37.12■■■■□ 3.53
PLOD3-215ENST00000487563 STRCQ7RTU9 1775 aa37.11■■■■□ 3.53
PLOD3-215ENST00000487563 MYOM3Q5VTT5 1437 aa37.1■■■■□ 3.53
PLOD3-215ENST00000487563 KIF3BO15066 747 aa37.08■■■■□ 3.53
PLOD3-215ENST00000487563 MIA2Q96PC5 1412 aa37.07■■■■□ 3.52
PLOD3-215ENST00000487563 PTPRKQ15262 1439 aa37.03■■■■□ 3.52
PLOD3-215ENST00000487563 MYO3AQ8NEV4 1616 aa37■■■■□ 3.51
PLOD3-215ENST00000487563 MAST1Q9Y2H9 1570 aa37■■■■□ 3.51
PLOD3-215ENST00000487563 CERKQ8TCT0 537 aa36.98■■■■□ 3.51
PLOD3-215ENST00000487563 KDM5DQ9BY66 1539 aa36.97■■■■□ 3.51
PLOD3-215ENST00000487563 NCOA1Q15788 1441 aa36.97■■■■□ 3.51
PLOD3-215ENST00000487563 CAMSAP1Q5T5Y3 1602 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms