RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
ITSN1-229ENST00000487427 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
ITSN1-229ENST00000487427 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
ITSN1-229ENST00000487427 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
ITSN1-229ENST00000487427 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
ITSN1-229ENST00000487427 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
ITSN1-229ENST00000487427 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
ITSN1-229ENST00000487427 RICTORQ6R327 1708 aa19.91■□□□□ 0.78
ITSN1-229ENST00000487427 MYO5CQ9NQX4 1742 aa19.9■□□□□ 0.78
ITSN1-229ENST00000487427 ZMYM4Q5VZL5 1548 aa19.9■□□□□ 0.78
ITSN1-229ENST00000487427 AFAP1Q8N556 730 aa19.89■□□□□ 0.77
ITSN1-229ENST00000487427 YEATS2Q9ULM3 1422 aa19.88■□□□□ 0.77
ITSN1-229ENST00000487427 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
ITSN1-229ENST00000487427 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
ITSN1-229ENST00000487427 ZFYVE16Q7Z3T8 1539 aa19.86■□□□□ 0.77
ITSN1-229ENST00000487427 ZNF518AQ6AHZ1 1483 aa19.86■□□□□ 0.77
ITSN1-229ENST00000487427 ATP10AO60312 1499 aa19.82■□□□□ 0.76
ITSN1-229ENST00000487427 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
ITSN1-229ENST00000487427 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
ITSN1-229ENST00000487427 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
ITSN1-229ENST00000487427 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
ITSN1-229ENST00000487427 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
ITSN1-229ENST00000487427 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
ITSN1-229ENST00000487427 CDC42BPBQ9Y5S2 1711 aa19.8■□□□□ 0.76
ITSN1-229ENST00000487427 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
ITSN1-229ENST00000487427 PTPRMP28827 1452 aa19.79■□□□□ 0.76
ITSN1-229ENST00000487427 TRAPPC8Q9Y2L5 1435 aa19.78■□□□□ 0.76
ITSN1-229ENST00000487427 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
ITSN1-229ENST00000487427 BCORL1Q5H9F3 1711 aa19.78■□□□□ 0.76
ITSN1-229ENST00000487427 C9orf84Q5VXU9 1444 aa19.77■□□□□ 0.76
ITSN1-229ENST00000487427 MLECQ14165 292 aa19.77■□□□□ 0.76
ITSN1-229ENST00000487427 KDM5CP41229 1560 aa19.77■□□□□ 0.76
ITSN1-229ENST00000487427 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
ITSN1-229ENST00000487427 ABCC1P33527 1531 aa19.76■□□□□ 0.75
ITSN1-229ENST00000487427 HNRNPMP52272 730 aaKnown RBP eCLIP19.75■□□□□ 0.75
ITSN1-229ENST00000487427 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
ITSN1-229ENST00000487427 KIAA1107Q9UPP5 1409 aa19.74■□□□□ 0.75
ITSN1-229ENST00000487427 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
ITSN1-229ENST00000487427 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
ITSN1-229ENST00000487427 EHBP1L1Q8N3D4 1523 aa19.71■□□□□ 0.75
ITSN1-229ENST00000487427 MADDQ8WXG6 1647 aa19.71■□□□□ 0.75
ITSN1-229ENST00000487427 SPAG9O60271 1321 aaKnown RBP19.71■□□□□ 0.75
ITSN1-229ENST00000487427 HECW2Q9P2P5 1572 aa19.7■□□□□ 0.74
ITSN1-229ENST00000487427 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
ITSN1-229ENST00000487427 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
ITSN1-229ENST00000487427 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
ITSN1-229ENST00000487427 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
ITSN1-229ENST00000487427 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
ITSN1-229ENST00000487427 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
ITSN1-229ENST00000487427 NCOA2Q15596 1464 aa19.64■□□□□ 0.73
ITSN1-229ENST00000487427 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
ITSN1-229ENST00000487427 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
ITSN1-229ENST00000487427 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
ITSN1-229ENST00000487427 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
ITSN1-229ENST00000487427 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
ITSN1-229ENST00000487427 AGLP35573 1532 aa19.61■□□□□ 0.73
ITSN1-229ENST00000487427 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
ITSN1-229ENST00000487427 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
ITSN1-229ENST00000487427 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
ITSN1-229ENST00000487427 MBD5Q9P267 1494 aa19.6■□□□□ 0.73
ITSN1-229ENST00000487427 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
ITSN1-229ENST00000487427 APLP2Q06481 763 aa19.6■□□□□ 0.73
ITSN1-229ENST00000487427 ESF1Q9H501 851 aaKnown RBP19.6■□□□□ 0.73
ITSN1-229ENST00000487427 CEBPAP49715 358 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-229ENST00000487427 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.72
ITSN1-229ENST00000487427 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
ITSN1-229ENST00000487427 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
ITSN1-229ENST00000487427 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
ITSN1-229ENST00000487427 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
ITSN1-229ENST00000487427 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
ITSN1-229ENST00000487427 A2MP01023 1474 aa19.54■□□□□ 0.72
ITSN1-229ENST00000487427 TSPY4P0CV99 314 aa19.52■□□□□ 0.72
ITSN1-229ENST00000487427 TSPY10P0CW01 314 aa19.52■□□□□ 0.72
ITSN1-229ENST00000487427 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
ITSN1-229ENST00000487427 HSPA2P54652 639 aa19.51■□□□□ 0.71
ITSN1-229ENST00000487427 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
ITSN1-229ENST00000487427 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
ITSN1-229ENST00000487427 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
ITSN1-229ENST00000487427 GGT6Q6P531 493 aa19.49■□□□□ 0.71
ITSN1-229ENST00000487427 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
ITSN1-229ENST00000487427 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
ITSN1-229ENST00000487427 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
ITSN1-229ENST00000487427 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
ITSN1-229ENST00000487427 PLXNC1O60486 1568 aa19.45■□□□□ 0.7
ITSN1-229ENST00000487427 KIF3BO15066 747 aa19.43■□□□□ 0.7
ITSN1-229ENST00000487427 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
ITSN1-229ENST00000487427 UHRF1BP1Q6BDS2 1440 aa19.42■□□□□ 0.7
ITSN1-229ENST00000487427 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
ITSN1-229ENST00000487427 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
ITSN1-229ENST00000487427 NPATQ14207 1427 aa19.38■□□□□ 0.69
ITSN1-229ENST00000487427 C3P01024 1663 aa19.37■□□□□ 0.69
ITSN1-229ENST00000487427 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
ITSN1-229ENST00000487427 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
ITSN1-229ENST00000487427 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
ITSN1-229ENST00000487427 WASHC2CQ9Y4E1 1318 aa19.33■□□□□ 0.69
ITSN1-229ENST00000487427 MROH2AA6NES4 1674 aa19.33■□□□□ 0.68
ITSN1-229ENST00000487427 FGD6Q6ZV73 1430 aa19.33■□□□□ 0.68
ITSN1-229ENST00000487427 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
ITSN1-229ENST00000487427 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
ITSN1-229ENST00000487427 ABCC5O15440 1437 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms