RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 FMN1Q68DA7 1419 aa26.81■■□□□ 1.88
SRRT-212ENST00000487311 ZFYVE16Q7Z3T8 1539 aa26.8■■□□□ 1.88
SRRT-212ENST00000487311 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
SRRT-212ENST00000487311 EFCAB2Q5VUJ9 269 aa26.78■■□□□ 1.88
SRRT-212ENST00000487311 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
SRRT-212ENST00000487311 POGZQ7Z3K3 1410 aa26.77■■□□□ 1.88
SRRT-212ENST00000487311 HSPA2P54652 639 aa26.77■■□□□ 1.88
SRRT-212ENST00000487311 FBXO41Q8TF61 875 aa26.77■■□□□ 1.88
SRRT-212ENST00000487311 CDK11AQ9UQ88 783 aaPredicted RBP26.75■■□□□ 1.87
SRRT-212ENST00000487311 KIF14Q15058 1648 aa26.72■■□□□ 1.87
SRRT-212ENST00000487311 AFAP1Q8N556 730 aa26.71■■□□□ 1.87
SRRT-212ENST00000487311 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.86
SRRT-212ENST00000487311 ATP10AO60312 1499 aa26.69■■□□□ 1.86
SRRT-212ENST00000487311 LRRIQ1Q96JM4 1722 aa26.68■■□□□ 1.86
SRRT-212ENST00000487311 MYO5CQ9NQX4 1742 aa26.68■■□□□ 1.86
SRRT-212ENST00000487311 CEBPAP49715 358 aaPredicted RBP26.64■■□□□ 1.86
SRRT-212ENST00000487311 C9orf84Q5VXU9 1444 aa26.64■■□□□ 1.85
SRRT-212ENST00000487311 ARHGAP5Q13017 1502 aa26.62■■□□□ 1.85
SRRT-212ENST00000487311 FER1L4A9Z1Z3 1794 aa26.61■■□□□ 1.85
SRRT-212ENST00000487311 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
SRRT-212ENST00000487311 CLIP1P30622 1438 aa26.59■■□□□ 1.85
SRRT-212ENST00000487311 ZNF518AQ6AHZ1 1483 aa26.59■■□□□ 1.85
SRRT-212ENST00000487311 MYT1LQ9UL68 1186 aa26.57■■□□□ 1.84
SRRT-212ENST00000487311 CDC42BPBQ9Y5S2 1711 aa26.56■■□□□ 1.84
SRRT-212ENST00000487311 KDM5CP41229 1560 aa26.55■■□□□ 1.84
SRRT-212ENST00000487311 CASKIN1Q8WXD9 1431 aa26.54■■□□□ 1.84
SRRT-212ENST00000487311 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
SRRT-212ENST00000487311 DIP2CQ9Y2E4 1556 aa26.49■■□□□ 1.83
SRRT-212ENST00000487311 MLH3Q9UHC1 1453 aa26.48■■□□□ 1.83
SRRT-212ENST00000487311 CERKQ8TCT0 537 aa26.46■■□□□ 1.83
SRRT-212ENST00000487311 CCDC18Q5T9S5 1454 aa26.46■■□□□ 1.83
SRRT-212ENST00000487311 PREX2Q70Z35 1606 aa26.45■■□□□ 1.82
SRRT-212ENST00000487311 ABCA6Q8N139 1617 aa26.44■■□□□ 1.82
SRRT-212ENST00000487311 ABCC1P33527 1531 aa26.44■■□□□ 1.82
SRRT-212ENST00000487311 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
SRRT-212ENST00000487311 PREX1Q8TCU6 1659 aa26.41■■□□□ 1.82
SRRT-212ENST00000487311 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
SRRT-212ENST00000487311 CDC42BPAQ5VT25 1732 aa26.4■■□□□ 1.82
SRRT-212ENST00000487311 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.82
SRRT-212ENST00000487311 SETD1BQ9UPS6 1966 aaKnown RBP26.37■■□□□ 1.81
SRRT-212ENST00000487311 HNRNPMP52272 730 aaKnown RBP eCLIP26.37■■□□□ 1.81
SRRT-212ENST00000487311 KIDINS220Q9ULH0 1771 aa26.37■■□□□ 1.81
SRRT-212ENST00000487311 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
SRRT-212ENST00000487311 STRCQ7RTU9 1775 aa26.36■■□□□ 1.81
SRRT-212ENST00000487311 AGLP35573 1532 aa26.36■■□□□ 1.81
SRRT-212ENST00000487311 GPATCH8Q9UKJ3 1502 aaKnown RBP26.35■■□□□ 1.81
SRRT-212ENST00000487311 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
SRRT-212ENST00000487311 ESF1Q9H501 851 aaKnown RBP26.33■■□□□ 1.81
SRRT-212ENST00000487311 C3P01024 1663 aa26.33■■□□□ 1.81
SRRT-212ENST00000487311 SAMD9LQ8IVG5 1584 aa26.31■■□□□ 1.8
SRRT-212ENST00000487311 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
SRRT-212ENST00000487311 SPAG9O60271 1321 aaKnown RBP26.28■■□□□ 1.8
SRRT-212ENST00000487311 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
SRRT-212ENST00000487311 SYCP2Q9BX26 1530 aa26.27■■□□□ 1.8
SRRT-212ENST00000487311 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
SRRT-212ENST00000487311 ZMYM3Q14202 1370 aa26.21■■□□□ 1.79
SRRT-212ENST00000487311 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
SRRT-212ENST00000487311 ZNF644Q9H582 1327 aaPredicted RBP26.21■■□□□ 1.79
SRRT-212ENST00000487311 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
SRRT-212ENST00000487311 PTPRTO14522 1441 aa26.19■■□□□ 1.78
SRRT-212ENST00000487311 SUPT6HQ7KZ85 1726 aaKnown RBP26.19■■□□□ 1.78
SRRT-212ENST00000487311 MTUS2Q5JR59 1369 aa26.18■■□□□ 1.78
SRRT-212ENST00000487311 ATP7AQ04656 1500 aa26.16■■□□□ 1.78
SRRT-212ENST00000487311 GGT6Q6P531 493 aa26.14■■□□□ 1.78
SRRT-212ENST00000487311 PLEKHH2Q8IVE3 1493 aa26.14■■□□□ 1.78
SRRT-212ENST00000487311 A2MP01023 1474 aa26.13■■□□□ 1.77
SRRT-212ENST00000487311 NCOA1Q15788 1441 aa26.13■■□□□ 1.77
SRRT-212ENST00000487311 NPATQ14207 1427 aa26.12■■□□□ 1.77
SRRT-212ENST00000487311 INO80Q9ULG1 1556 aaPredicted RBP26.12■■□□□ 1.77
SRRT-212ENST00000487311 PLXNC1O60486 1568 aa26.11■■□□□ 1.77
SRRT-212ENST00000487311 MROH2AA6NES4 1674 aa26.1■■□□□ 1.77
SRRT-212ENST00000487311 NCKAP5LQ9HCH0 1330 aa26.1■■□□□ 1.77
SRRT-212ENST00000487311 MBD5Q9P267 1494 aa26.09■■□□□ 1.77
SRRT-212ENST00000487311 LTBP4Q8N2S1 1624 aa26.08■■□□□ 1.77
SRRT-212ENST00000487311 CLTCQ00610 1675 aaKnown RBP26.08■■□□□ 1.77
SRRT-212ENST00000487311 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
SRRT-212ENST00000487311 CAMSAP1Q5T5Y3 1602 aa26.07■■□□□ 1.76
SRRT-212ENST00000487311 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
SRRT-212ENST00000487311 PPP6R1Q9UPN7 881 aa26.02■■□□□ 1.76
SRRT-212ENST00000487311 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
SRRT-212ENST00000487311 EHBP1L1Q8N3D4 1523 aa26.01■■□□□ 1.75
SRRT-212ENST00000487311 RTEL1-TNFRSF6BF6WH68 1400 aa25.98■■□□□ 1.75
SRRT-212ENST00000487311 DHX29Q7Z478 1369 aaKnown RBP25.98■■□□□ 1.75
SRRT-212ENST00000487311 ADGBQ8N7X0 1667 aa25.98■■□□□ 1.75
SRRT-212ENST00000487311 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
SRRT-212ENST00000487311 KIF3BO15066 747 aa25.95■■□□□ 1.74
SRRT-212ENST00000487311 PKD2Q13563 968 aa25.95■■□□□ 1.74
SRRT-212ENST00000487311 ILDR2Q71H61 639 aa25.95■■□□□ 1.74
SRRT-212ENST00000487311 MYO3AQ8NEV4 1616 aa25.95■■□□□ 1.74
SRRT-212ENST00000487311 FBXO31Q5XUX0 539 aaPredicted RBP25.94■■□□□ 1.74
SRRT-212ENST00000487311 NCOA2Q15596 1464 aa25.93■■□□□ 1.74
SRRT-212ENST00000487311 CEP170BQ9Y4F5 1589 aaPredicted RBP25.93■■□□□ 1.74
SRRT-212ENST00000487311 DISP3Q9P2K9 1392 aa25.93■■□□□ 1.74
SRRT-212ENST00000487311 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
SRRT-212ENST00000487311 ZNF142P52746 1687 aaPredicted RBP25.91■■□□□ 1.74
SRRT-212ENST00000487311 TCOF1Q13428 1488 aaKnown RBP25.91■■□□□ 1.74
SRRT-212ENST00000487311 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
SRRT-212ENST00000487311 IQSEC2Q5JU85 1478 aa25.9■■□□□ 1.74
SRRT-212ENST00000487311 CAMSAP2Q08AD1 1489 aa25.88■■□□□ 1.73
SRRT-212ENST00000487311 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms