RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
UBE4B-209ENST00000487244 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
UBE4B-209ENST00000487244 KDM6BO15054 1643 aa11.7□□□□□ -0.54
UBE4B-209ENST00000487244 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
UBE4B-209ENST00000487244 HECW1Q76N89 1606 aa11.68□□□□□ -0.54
UBE4B-209ENST00000487244 PCF11O94913 1555 aaKnown RBP11.68□□□□□ -0.54
UBE4B-209ENST00000487244 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
UBE4B-209ENST00000487244 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
UBE4B-209ENST00000487244 CLIP1P30622 1438 aa11.67□□□□□ -0.54
UBE4B-209ENST00000487244 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
UBE4B-209ENST00000487244 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
UBE4B-209ENST00000487244 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
UBE4B-209ENST00000487244 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
UBE4B-209ENST00000487244 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
UBE4B-209ENST00000487244 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
UBE4B-209ENST00000487244 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
UBE4B-209ENST00000487244 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
UBE4B-209ENST00000487244 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-209ENST00000487244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE4B-209ENST00000487244 CASKIN1Q8WXD9 1431 aa11.6□□□□□ -0.55
UBE4B-209ENST00000487244 KIF14Q15058 1648 aa11.6□□□□□ -0.55
UBE4B-209ENST00000487244 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
UBE4B-209ENST00000487244 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
UBE4B-209ENST00000487244 CCDC18Q5T9S5 1454 aa11.56□□□□□ -0.56
UBE4B-209ENST00000487244 MYO5CQ9NQX4 1742 aa11.55□□□□□ -0.56
UBE4B-209ENST00000487244 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
UBE4B-209ENST00000487244 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
UBE4B-209ENST00000487244 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
UBE4B-209ENST00000487244 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
UBE4B-209ENST00000487244 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
UBE4B-209ENST00000487244 ARAP3Q8WWN8 1544 aa11.54□□□□□ -0.56
UBE4B-209ENST00000487244 NEO1Q92859 1461 aa11.53□□□□□ -0.56
UBE4B-209ENST00000487244 FANCAO15360 1455 aa11.52□□□□□ -0.56
UBE4B-209ENST00000487244 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
UBE4B-209ENST00000487244 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
UBE4B-209ENST00000487244 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
UBE4B-209ENST00000487244 CDC42BPBQ9Y5S2 1711 aa11.51□□□□□ -0.57
UBE4B-209ENST00000487244 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-209ENST00000487244 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
UBE4B-209ENST00000487244 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
UBE4B-209ENST00000487244 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
UBE4B-209ENST00000487244 PLCH2O75038 1416 aa11.49□□□□□ -0.57
UBE4B-209ENST00000487244 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
UBE4B-209ENST00000487244 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
UBE4B-209ENST00000487244 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
UBE4B-209ENST00000487244 ARHGAP5Q13017 1502 aa11.47□□□□□ -0.57
UBE4B-209ENST00000487244 VPS8Q8N3P4 1428 aa11.47□□□□□ -0.57
UBE4B-209ENST00000487244 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
UBE4B-209ENST00000487244 ADGRL1O94910 1474 aa11.45□□□□□ -0.58
UBE4B-209ENST00000487244 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
UBE4B-209ENST00000487244 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
UBE4B-209ENST00000487244 EHBP1L1Q8N3D4 1523 aa11.44□□□□□ -0.58
UBE4B-209ENST00000487244 ARHGEF40Q8TER5 1519 aa11.44□□□□□ -0.58
UBE4B-209ENST00000487244 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
UBE4B-209ENST00000487244 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
UBE4B-209ENST00000487244 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
UBE4B-209ENST00000487244 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
UBE4B-209ENST00000487244 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
UBE4B-209ENST00000487244 ABCC1P33527 1531 aa11.42□□□□□ -0.58
UBE4B-209ENST00000487244 ITSN2Q9NZM3 1697 aa11.42□□□□□ -0.58
UBE4B-209ENST00000487244 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
UBE4B-209ENST00000487244 ARHGEF12Q9NZN5 1544 aa11.41□□□□□ -0.58
UBE4B-209ENST00000487244 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
UBE4B-209ENST00000487244 EFCAB2Q5VUJ9 269 aa11.41□□□□□ -0.58
UBE4B-209ENST00000487244 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.58
UBE4B-209ENST00000487244 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.59
UBE4B-209ENST00000487244 KDM5CP41229 1560 aa11.39□□□□□ -0.59
UBE4B-209ENST00000487244 SUPT6HQ7KZ85 1726 aaKnown RBP11.39□□□□□ -0.59
UBE4B-209ENST00000487244 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
UBE4B-209ENST00000487244 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
UBE4B-209ENST00000487244 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
UBE4B-209ENST00000487244 SYCP2Q9BX26 1530 aa11.38□□□□□ -0.59
UBE4B-209ENST00000487244 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
UBE4B-209ENST00000487244 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
UBE4B-209ENST00000487244 NCOA2Q15596 1464 aa11.37□□□□□ -0.59
UBE4B-209ENST00000487244 ZNF518AQ6AHZ1 1483 aa11.37□□□□□ -0.59
UBE4B-209ENST00000487244 LRRC9Q6ZRR7 1453 aa11.37□□□□□ -0.59
UBE4B-209ENST00000487244 HECW2Q9P2P5 1572 aa11.37□□□□□ -0.59
UBE4B-209ENST00000487244 BCORL1Q5H9F3 1711 aa11.36□□□□□ -0.59
UBE4B-209ENST00000487244 AFAP1Q8N556 730 aa11.36□□□□□ -0.59
UBE4B-209ENST00000487244 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
UBE4B-209ENST00000487244 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
UBE4B-209ENST00000487244 KANK4Q5T7N3 995 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-209ENST00000487244 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-209ENST00000487244 MAGI2Q86UL8 1455 aa11.35□□□□□ -0.59
UBE4B-209ENST00000487244 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
UBE4B-209ENST00000487244 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
UBE4B-209ENST00000487244 DIP2CQ9Y2E4 1556 aa11.34□□□□□ -0.59
UBE4B-209ENST00000487244 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-209ENST00000487244 CFDP1Q9UEE9 299 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-209ENST00000487244 MADDQ8WXG6 1647 aa11.33□□□□□ -0.6
UBE4B-209ENST00000487244 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBE4B-209ENST00000487244 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-209ENST00000487244 ARID4BQ4LE39 1312 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-209ENST00000487244 ATP10AO60312 1499 aa11.31□□□□□ -0.6
UBE4B-209ENST00000487244 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
UBE4B-209ENST00000487244 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
UBE4B-209ENST00000487244 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
UBE4B-209ENST00000487244 KIAA1107Q9UPP5 1409 aa11.3□□□□□ -0.6
UBE4B-209ENST00000487244 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms