RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 EFCAB2Q5VUJ9 269 aa30.16■■■□□ 2.42
PCOLCE-208ENST00000487172 FANCAO15360 1455 aa30.15■■■□□ 2.42
PCOLCE-208ENST00000487172 CFAP74Q9C0B2 1584 aa30.15■■■□□ 2.42
PCOLCE-208ENST00000487172 ARHGAP5Q13017 1502 aa30.12■■■□□ 2.41
PCOLCE-208ENST00000487172 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
PCOLCE-208ENST00000487172 AKNAQ7Z591 1439 aa30.1■■■□□ 2.41
PCOLCE-208ENST00000487172 CFDP1Q9UEE9 299 aaPredicted RBP30.07■■■□□ 2.4
PCOLCE-208ENST00000487172 COL17A1Q9UMD9 1497 aaPredicted RBP30.03■■■□□ 2.4
PCOLCE-208ENST00000487172 MYOM3Q5VTT5 1437 aa30.03■■■□□ 2.4
PCOLCE-208ENST00000487172 KDM6BO15054 1643 aa30.03■■■□□ 2.4
PCOLCE-208ENST00000487172 ADGRL1O94910 1474 aa30■■■□□ 2.39
PCOLCE-208ENST00000487172 MIA2Q96PC5 1412 aa30■■■□□ 2.39
PCOLCE-208ENST00000487172 PPARGC1BQ86YN6 1023 aaKnown RBP29.98■■■□□ 2.39
PCOLCE-208ENST00000487172 SAMD9LQ8IVG5 1584 aa29.98■■■□□ 2.39
PCOLCE-208ENST00000487172 ZNF777Q9ULD5 760 aaPredicted RBP29.97■■■□□ 2.39
PCOLCE-208ENST00000487172 SCAPERQ9BY12 1400 aa29.96■■■□□ 2.39
PCOLCE-208ENST00000487172 PLEKHH2Q8IVE3 1493 aa29.96■■■□□ 2.39
PCOLCE-208ENST00000487172 DENND4BO75064 1496 aaPredicted RBP29.95■■■□□ 2.39
PCOLCE-208ENST00000487172 ABCC1P33527 1531 aa29.95■■■□□ 2.38
PCOLCE-208ENST00000487172 KIAA1107Q9UPP5 1409 aa29.94■■■□□ 2.38
PCOLCE-208ENST00000487172 ARHGEF12Q9NZN5 1544 aa29.9■■■□□ 2.38
PCOLCE-208ENST00000487172 ZNF644Q9H582 1327 aaPredicted RBP29.9■■■□□ 2.38
PCOLCE-208ENST00000487172 FGD6Q6ZV73 1430 aa29.89■■■□□ 2.38
PCOLCE-208ENST00000487172 RICTORQ6R327 1708 aa29.89■■■□□ 2.38
PCOLCE-208ENST00000487172 RAPGEF3O95398 923 aa29.89■■■□□ 2.38
PCOLCE-208ENST00000487172 POGZQ7Z3K3 1410 aa29.88■■■□□ 2.37
PCOLCE-208ENST00000487172 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
PCOLCE-208ENST00000487172 FRMPD1Q5SYB0 1578 aa29.86■■■□□ 2.37
PCOLCE-208ENST00000487172 HNRNPMP52272 730 aaKnown RBP eCLIP29.85■■■□□ 2.37
PCOLCE-208ENST00000487172 SYCP2Q9BX26 1530 aa29.85■■■□□ 2.37
PCOLCE-208ENST00000487172 TCOF1Q13428 1488 aaKnown RBP29.84■■■□□ 2.37
PCOLCE-208ENST00000487172 ZNF518AQ6AHZ1 1483 aa29.84■■■□□ 2.37
PCOLCE-208ENST00000487172 MBD5Q9P267 1494 aa29.84■■■□□ 2.37
PCOLCE-208ENST00000487172 PTPN23Q9H3S7 1636 aa29.84■■■□□ 2.37
PCOLCE-208ENST00000487172 TRAPPC8Q9Y2L5 1435 aa29.83■■■□□ 2.37
PCOLCE-208ENST00000487172 RSPH4AQ5TD94 716 aa29.83■■■□□ 2.37
PCOLCE-208ENST00000487172 AFAP1Q8N556 730 aa29.81■■■□□ 2.36
PCOLCE-208ENST00000487172 KDM5CP41229 1560 aa29.8■■■□□ 2.36
PCOLCE-208ENST00000487172 ZMYM4Q5VZL5 1548 aa29.8■■■□□ 2.36
PCOLCE-208ENST00000487172 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
PCOLCE-208ENST00000487172 MAGI2Q86UL8 1455 aa29.76■■■□□ 2.35
PCOLCE-208ENST00000487172 CCDC141Q6ZP82 1450 aa29.73■■■□□ 2.35
PCOLCE-208ENST00000487172 MLH3Q9UHC1 1453 aa29.73■■■□□ 2.35
PCOLCE-208ENST00000487172 RRBP1Q9P2E9 1410 aaKnown RBP29.72■■■□□ 2.35
PCOLCE-208ENST00000487172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
PCOLCE-208ENST00000487172 HECW2Q9P2P5 1572 aa29.69■■■□□ 2.34
PCOLCE-208ENST00000487172 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
PCOLCE-208ENST00000487172 SPAG9O60271 1321 aaKnown RBP29.68■■■□□ 2.34
PCOLCE-208ENST00000487172 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
PCOLCE-208ENST00000487172 TSPY4P0CV99 314 aa29.66■■■□□ 2.34
PCOLCE-208ENST00000487172 TSPY10P0CW01 314 aa29.66■■■□□ 2.34
PCOLCE-208ENST00000487172 DNMT1P26358 1616 aaKnown RBP29.65■■■□□ 2.34
PCOLCE-208ENST00000487172 ZFYVE16Q7Z3T8 1539 aa29.65■■■□□ 2.34
PCOLCE-208ENST00000487172 ABCC5O15440 1437 aa29.64■■■□□ 2.34
PCOLCE-208ENST00000487172 KIDINS220Q9ULH0 1771 aa29.64■■■□□ 2.34
PCOLCE-208ENST00000487172 YEATS2Q9ULM3 1422 aa29.63■■■□□ 2.33
PCOLCE-208ENST00000487172 INO80Q9ULG1 1556 aaPredicted RBP29.63■■■□□ 2.33
PCOLCE-208ENST00000487172 DAPK1P53355 1430 aa29.62■■■□□ 2.33
PCOLCE-208ENST00000487172 ARHGEF40Q8TER5 1519 aa29.62■■■□□ 2.33
PCOLCE-208ENST00000487172 MYT1LQ9UL68 1186 aa29.62■■■□□ 2.33
PCOLCE-208ENST00000487172 MAST1Q9Y2H9 1570 aa29.61■■■□□ 2.33
PCOLCE-208ENST00000487172 ATP7AQ04656 1500 aa29.61■■■□□ 2.33
PCOLCE-208ENST00000487172 SHANK2Q9UPX8 1470 aa29.6■■■□□ 2.33
PCOLCE-208ENST00000487172 CROCC2H7BZ55 1655 aa29.58■■■□□ 2.33
PCOLCE-208ENST00000487172 ATP10AO60312 1499 aa29.57■■■□□ 2.32
PCOLCE-208ENST00000487172 C9orf84Q5VXU9 1444 aa29.56■■■□□ 2.32
PCOLCE-208ENST00000487172 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
PCOLCE-208ENST00000487172 ABCA6Q8N139 1617 aa29.55■■■□□ 2.32
PCOLCE-208ENST00000487172 REREQ9P2R6 1566 aa29.52■■■□□ 2.32
PCOLCE-208ENST00000487172 PTPRKQ15262 1439 aa29.48■■■□□ 2.31
PCOLCE-208ENST00000487172 ADGBQ8N7X0 1667 aa29.48■■■□□ 2.31
PCOLCE-208ENST00000487172 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
PCOLCE-208ENST00000487172 ADGRL2O95490 1459 aa29.47■■■□□ 2.31
PCOLCE-208ENST00000487172 A2MP01023 1474 aa29.45■■■□□ 2.31
PCOLCE-208ENST00000487172 ANKRD30AQ9BXX3 1397 aa29.44■■■□□ 2.3
PCOLCE-208ENST00000487172 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
PCOLCE-208ENST00000487172 NCOA1Q15788 1441 aa29.44■■■□□ 2.3
PCOLCE-208ENST00000487172 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
PCOLCE-208ENST00000487172 ITGAEP38570 1179 aa29.42■■■□□ 2.3
PCOLCE-208ENST00000487172 ROCK1Q13464 1354 aa29.41■■■□□ 2.3
PCOLCE-208ENST00000487172 AGLP35573 1532 aa29.41■■■□□ 2.3
PCOLCE-208ENST00000487172 SIGLEC1Q9BZZ2 1709 aa29.4■■■□□ 2.3
PCOLCE-208ENST00000487172 KIF15Q9NS87 1388 aa29.38■■■□□ 2.29
PCOLCE-208ENST00000487172 DUOX2Q9NRD8 1548 aa29.37■■■□□ 2.29
PCOLCE-208ENST00000487172 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
PCOLCE-208ENST00000487172 ARID4BQ4LE39 1312 aaPredicted RBP29.36■■■□□ 2.29
PCOLCE-208ENST00000487172 BCORL1Q5H9F3 1711 aa29.3■■■□□ 2.28
PCOLCE-208ENST00000487172 ERBINQ96RT1 1412 aa29.29■■■□□ 2.28
PCOLCE-208ENST00000487172 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
PCOLCE-208ENST00000487172 KIF3BO15066 747 aa29.25■■■□□ 2.27
PCOLCE-208ENST00000487172 ANKRD50Q9ULJ7 1429 aa29.24■■■□□ 2.27
PCOLCE-208ENST00000487172 ADAMTSL3P82987 1691 aa29.22■■■□□ 2.27
PCOLCE-208ENST00000487172 MLECQ14165 292 aa29.22■■■□□ 2.27
PCOLCE-208ENST00000487172 PPP6R1Q9UPN7 881 aa29.21■■■□□ 2.27
PCOLCE-208ENST00000487172 HFM1A2PYH4 1435 aa29.2■■■□□ 2.26
PCOLCE-208ENST00000487172 NAIPQ13075 1403 aa29.2■■■□□ 2.26
PCOLCE-208ENST00000487172 KDM4FA0A1W2PPD8 638 aa29.18■■■□□ 2.26
PCOLCE-208ENST00000487172 GGT6Q6P531 493 aa29.18■■■□□ 2.26
PCOLCE-208ENST00000487172 RNF17Q9BXT8 1623 aaKnown RBP29.18■■■□□ 2.26
PCOLCE-208ENST00000487172 GCC2Q8IWJ2 1684 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms