RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
LBR-207ENST00000487054 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
LBR-207ENST00000487054 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
LBR-207ENST00000487054 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
LBR-207ENST00000487054 PLCH2O75038 1416 aa16.5■□□□□ 0.23
LBR-207ENST00000487054 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
LBR-207ENST00000487054 ZMYM4Q5VZL5 1548 aa16.49■□□□□ 0.23
LBR-207ENST00000487054 YEATS2Q9ULM3 1422 aa16.48■□□□□ 0.23
LBR-207ENST00000487054 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
LBR-207ENST00000487054 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
LBR-207ENST00000487054 SCAPERQ9BY12 1400 aa16.46■□□□□ 0.23
LBR-207ENST00000487054 PTPRMP28827 1452 aa16.46■□□□□ 0.23
LBR-207ENST00000487054 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
LBR-207ENST00000487054 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
LBR-207ENST00000487054 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
LBR-207ENST00000487054 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
LBR-207ENST00000487054 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
LBR-207ENST00000487054 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
LBR-207ENST00000487054 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
LBR-207ENST00000487054 ARHGAP5Q13017 1502 aa16.42■□□□□ 0.22
LBR-207ENST00000487054 CLIP1P30622 1438 aa16.42■□□□□ 0.22
LBR-207ENST00000487054 PREX2Q70Z35 1606 aa16.4■□□□□ 0.22
LBR-207ENST00000487054 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
LBR-207ENST00000487054 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
LBR-207ENST00000487054 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
LBR-207ENST00000487054 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
LBR-207ENST00000487054 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
LBR-207ENST00000487054 KDM5CP41229 1560 aa16.36■□□□□ 0.21
LBR-207ENST00000487054 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
LBR-207ENST00000487054 MLECQ14165 292 aa16.35■□□□□ 0.21
LBR-207ENST00000487054 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
LBR-207ENST00000487054 FER1L4A9Z1Z3 1794 aa16.35■□□□□ 0.21
LBR-207ENST00000487054 ITSN2Q9NZM3 1697 aa16.34■□□□□ 0.21
LBR-207ENST00000487054 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
LBR-207ENST00000487054 ZNF518AQ6AHZ1 1483 aa16.34■□□□□ 0.21
LBR-207ENST00000487054 ABCC1P33527 1531 aa16.34■□□□□ 0.21
LBR-207ENST00000487054 ATP10AO60312 1499 aa16.33■□□□□ 0.2
LBR-207ENST00000487054 DIP2CQ9Y2E4 1556 aa16.33■□□□□ 0.2
LBR-207ENST00000487054 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
LBR-207ENST00000487054 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
LBR-207ENST00000487054 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
LBR-207ENST00000487054 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
LBR-207ENST00000487054 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
LBR-207ENST00000487054 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
LBR-207ENST00000487054 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
LBR-207ENST00000487054 GPATCH8Q9UKJ3 1502 aaKnown RBP16.27■□□□□ 0.2
LBR-207ENST00000487054 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
LBR-207ENST00000487054 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
LBR-207ENST00000487054 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
LBR-207ENST00000487054 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
LBR-207ENST00000487054 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
LBR-207ENST00000487054 REREQ9P2R6 1566 aa16.24■□□□□ 0.19
LBR-207ENST00000487054 HSPA2P54652 639 aa16.23■□□□□ 0.19
LBR-207ENST00000487054 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
LBR-207ENST00000487054 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
LBR-207ENST00000487054 LOC105371045A0A1W2PR82 267 aa16.2■□□□□ 0.18
LBR-207ENST00000487054 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
LBR-207ENST00000487054 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
LBR-207ENST00000487054 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
LBR-207ENST00000487054 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
LBR-207ENST00000487054 C3P01024 1663 aa16.18■□□□□ 0.18
LBR-207ENST00000487054 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
LBR-207ENST00000487054 AGLP35573 1532 aa16.17■□□□□ 0.18
LBR-207ENST00000487054 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
LBR-207ENST00000487054 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
LBR-207ENST00000487054 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
LBR-207ENST00000487054 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
LBR-207ENST00000487054 ATP7AQ04656 1500 aa16.15■□□□□ 0.18
LBR-207ENST00000487054 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
LBR-207ENST00000487054 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
LBR-207ENST00000487054 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
LBR-207ENST00000487054 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
LBR-207ENST00000487054 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
LBR-207ENST00000487054 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
LBR-207ENST00000487054 STRCQ7RTU9 1775 aa16.09■□□□□ 0.17
LBR-207ENST00000487054 CLTCQ00610 1675 aaKnown RBP16.08■□□□□ 0.17
LBR-207ENST00000487054 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.16
LBR-207ENST00000487054 A2MP01023 1474 aa16.08■□□□□ 0.16
LBR-207ENST00000487054 ADGBQ8N7X0 1667 aa16.07■□□□□ 0.16
LBR-207ENST00000487054 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
LBR-207ENST00000487054 MROH2AA6NES4 1674 aa16.06■□□□□ 0.16
LBR-207ENST00000487054 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
LBR-207ENST00000487054 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
LBR-207ENST00000487054 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
LBR-207ENST00000487054 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
LBR-207ENST00000487054 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
LBR-207ENST00000487054 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
LBR-207ENST00000487054 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.16
LBR-207ENST00000487054 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
LBR-207ENST00000487054 CCDC141Q6ZP82 1450 aa16.01■□□□□ 0.15
LBR-207ENST00000487054 GGT6Q6P531 493 aa16■□□□□ 0.15
LBR-207ENST00000487054 ZMYM3Q14202 1370 aa16■□□□□ 0.15
LBR-207ENST00000487054 RTEL1-TNFRSF6BF6WH68 1400 aa15.99■□□□□ 0.15
LBR-207ENST00000487054 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
LBR-207ENST00000487054 ARHGEF5Q12774 1597 aa15.97■□□□□ 0.15
LBR-207ENST00000487054 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
LBR-207ENST00000487054 NPATQ14207 1427 aa15.95■□□□□ 0.14
LBR-207ENST00000487054 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
LBR-207ENST00000487054 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
LBR-207ENST00000487054 CAMSAP1Q5T5Y3 1602 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms