RNA–Protein interactions for RNA: ENST00000486993.1

SGPL1-204, Transcript of sphingosine-1-phosphate lyase 1, human

TSL 1 (best)

Gene SGPL1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGPL1-204	ENST00000486993	MTUS2	Q5JR59	1369 aa		32.85	■■■□□ 2.85
SGPL1-204	ENST00000486993	CDC42BPB	Q9Y5S2	1711 aa		32.83	■■■□□ 2.85
SGPL1-204	ENST00000486993	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.81	■■■□□ 2.84
SGPL1-204	ENST00000486993	PREX2	Q70Z35	1606 aa		32.81	■■■□□ 2.84
SGPL1-204	ENST00000486993	POGZ	Q7Z3K3	1410 aa		32.8	■■■□□ 2.84
SGPL1-204	ENST00000486993	CDC42BPA	Q5VT25	1732 aa		32.78	■■■□□ 2.84
SGPL1-204	ENST00000486993	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.77	■■■□□ 2.84
SGPL1-204	ENST00000486993	ZMYM4	Q5VZL5	1548 aa		32.77	■■■□□ 2.84
SGPL1-204	ENST00000486993	ARHGEF40	Q8TER5	1519 aa		32.77	■■■□□ 2.84
SGPL1-204	ENST00000486993	MYT1L	Q9UL68	1186 aa		32.75	■■■□□ 2.83
SGPL1-204	ENST00000486993	ZFYVE16	Q7Z3T8	1539 aa		32.75	■■■□□ 2.83
SGPL1-204	ENST00000486993	VPS8	Q8N3P4	1428 aa		32.74	■■■□□ 2.83
SGPL1-204	ENST00000486993	YEATS2	Q9ULM3	1422 aa		32.73	■■■□□ 2.83
SGPL1-204	ENST00000486993	CCNB3	Q8WWL7	1395 aa		32.71	■■■□□ 2.83
SGPL1-204	ENST00000486993	AFAP1	Q8N556	730 aa		32.71	■■■□□ 2.83
SGPL1-204	ENST00000486993	EHBP1L1	Q8N3D4	1523 aa		32.71	■■■□□ 2.83
SGPL1-204	ENST00000486993	MAGI2	Q86UL8	1455 aa		32.7	■■■□□ 2.83
SGPL1-204	ENST00000486993	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.7	■■■□□ 2.83
SGPL1-204	ENST00000486993	ZNF518A	Q6AHZ1	1483 aa		32.69	■■■□□ 2.82
SGPL1-204	ENST00000486993	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.66	■■■□□ 2.82
SGPL1-204	ENST00000486993	ABCC1	P33527	1531 aa		32.65	■■■□□ 2.82
SGPL1-204	ENST00000486993	ITSN2	Q9NZM3	1697 aa		32.62	■■■□□ 2.81
SGPL1-204	ENST00000486993	TIAM1	Q13009	1591 aa		32.62	■■■□□ 2.81
SGPL1-204	ENST00000486993	ARHGEF12	Q9NZN5	1544 aa		32.62	■■■□□ 2.81
SGPL1-204	ENST00000486993	TRAPPC8	Q9Y2L5	1435 aa		32.6	■■■□□ 2.81
SGPL1-204	ENST00000486993	BCORL1	Q5H9F3	1711 aa		32.6	■■■□□ 2.81
SGPL1-204	ENST00000486993	KDM5C	P41229	1560 aa		32.59	■■■□□ 2.81
SGPL1-204	ENST00000486993	SAMD9L	Q8IVG5	1584 aa		32.59	■■■□□ 2.81
SGPL1-204	ENST00000486993	ATP10A	O60312	1499 aa		32.58	■■■□□ 2.81
SGPL1-204	ENST00000486993	ADAMTSL3	P82987	1691 aa		32.57	■■■□□ 2.8
SGPL1-204	ENST00000486993	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.57	■■■□□ 2.8
SGPL1-204	ENST00000486993	MLEC	Q14165	292 aa		32.57	■■■□□ 2.8
SGPL1-204	ENST00000486993	HECW2	Q9P2P5	1572 aa		32.57	■■■□□ 2.8
SGPL1-204	ENST00000486993	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.55	■■■□□ 2.8
SGPL1-204	ENST00000486993	SYCP2	Q9BX26	1530 aa		32.55	■■■□□ 2.8
SGPL1-204	ENST00000486993	SIGLEC1	Q9BZZ2	1709 aa		32.54	■■■□□ 2.8
SGPL1-204	ENST00000486993	C9orf84	Q5VXU9	1444 aa		32.53	■■■□□ 2.8
SGPL1-204	ENST00000486993	NCOA2	Q15596	1464 aa		32.53	■■■□□ 2.8
SGPL1-204	ENST00000486993	MADD	Q8WXG6	1647 aa		32.52	■■■□□ 2.8
SGPL1-204	ENST00000486993	APLP2	Q06481	763 aa		32.5	■■■□□ 2.79
SGPL1-204	ENST00000486993	LRRC9	Q6ZRR7	1453 aa		32.49	■■■□□ 2.79
SGPL1-204	ENST00000486993	PLEKHH2	Q8IVE3	1493 aa		32.49	■■■□□ 2.79
SGPL1-204	ENST00000486993	MLH3	Q9UHC1	1453 aa		32.49	■■■□□ 2.79
SGPL1-204	ENST00000486993	ZNF644	Q9H582	1327 aa	Predicted RBP	32.49	■■■□□ 2.79
SGPL1-204	ENST00000486993	KANK4	Q5T7N3	995 aa	Predicted RBP	32.47	■■■□□ 2.79
SGPL1-204	ENST00000486993	PTPRM	P28827	1452 aa		32.47	■■■□□ 2.79
SGPL1-204	ENST00000486993	DIP2C	Q9Y2E4	1556 aa		32.46	■■■□□ 2.79
SGPL1-204	ENST00000486993	ABCA6	Q8N139	1617 aa		32.45	■■■□□ 2.79
SGPL1-204	ENST00000486993	PLPPR3	Q6T4P5	718 aa		32.45	■■■□□ 2.79
SGPL1-204	ENST00000486993	SPAG9	O60271	1321 aa	Known RBP	32.45	■■■□□ 2.78
SGPL1-204	ENST00000486993	KIAA1107	Q9UPP5	1409 aa		32.44	■■■□□ 2.78
SGPL1-204	ENST00000486993	RIMS1	Q86UR5	1692 aa	Known RBP	32.44	■■■□□ 2.78
SGPL1-204	ENST00000486993	MAP3K1	Q13233	1512 aa		32.42	■■■□□ 2.78
SGPL1-204	ENST00000486993	KIDINS220	Q9ULH0	1771 aa		32.42	■■■□□ 2.78
SGPL1-204	ENST00000486993	FER1L4	A9Z1Z3	1794 aa		32.35	■■■□□ 2.77
SGPL1-204	ENST00000486993	ATP7A	Q04656	1500 aa		32.33	■■■□□ 2.77
SGPL1-204	ENST00000486993	RERE	Q9P2R6	1566 aa		32.32	■■■□□ 2.77
SGPL1-204	ENST00000486993	CAMSAP2	Q08AD1	1489 aa		32.32	■■■□□ 2.76
SGPL1-204	ENST00000486993	MBD5	Q9P267	1494 aa		32.29	■■■□□ 2.76
SGPL1-204	ENST00000486993	INO80	Q9ULG1	1556 aa	Predicted RBP	32.28	■■■□□ 2.76
SGPL1-204	ENST00000486993	ESF1	Q9H501	851 aa	Known RBP	32.25	■■■□□ 2.75
SGPL1-204	ENST00000486993	AGL	P35573	1532 aa		32.24	■■■□□ 2.75
SGPL1-204	ENST00000486993	CCDC141	Q6ZP82	1450 aa		32.23	■■■□□ 2.75
SGPL1-204	ENST00000486993	MYOM3	Q5VTT5	1437 aa		32.22	■■■□□ 2.75
SGPL1-204	ENST00000486993	RSPH4A	Q5TD94	716 aa		32.2	■■■□□ 2.75
SGPL1-204	ENST00000486993	A2M	P01023	1474 aa		32.19	■■■□□ 2.74
SGPL1-204	ENST00000486993	CEBPA	P49715	358 aa	Predicted RBP	32.18	■■■□□ 2.74
SGPL1-204	ENST00000486993	TSPY4	P0CV99	314 aa		32.16	■■■□□ 2.74
SGPL1-204	ENST00000486993	TSPY10	P0CW01	314 aa		32.16	■■■□□ 2.74
SGPL1-204	ENST00000486993	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.16	■■■□□ 2.74
SGPL1-204	ENST00000486993	ADGB	Q8N7X0	1667 aa		32.15	■■■□□ 2.74
SGPL1-204	ENST00000486993	MIA2	Q96PC5	1412 aa		32.15	■■■□□ 2.74
SGPL1-204	ENST00000486993	ARHGEF5	Q12774	1597 aa		32.14	■■■□□ 2.74
SGPL1-204	ENST00000486993	PLXNC1	O60486	1568 aa		32.11	■■■□□ 2.73
SGPL1-204	ENST00000486993	GGT6	Q6P531	493 aa		32.1	■■■□□ 2.73
SGPL1-204	ENST00000486993	LMTK3	Q96Q04	1460 aa		32.05	■■■□□ 2.72
SGPL1-204	ENST00000486993	DHX29	Q7Z478	1369 aa	Known RBP	32.05	■■■□□ 2.72
SGPL1-204	ENST00000486993	PTPN23	Q9H3S7	1636 aa		32.04	■■■□□ 2.72
SGPL1-204	ENST00000486993	C3	P01024	1663 aa		32.02	■■■□□ 2.72
SGPL1-204	ENST00000486993	CNTLN	Q9NXG0	1405 aa		32.02	■■■□□ 2.72
SGPL1-204	ENST00000486993	HSPA2	P54652	639 aa		32.02	■■■□□ 2.72
SGPL1-204	ENST00000486993	FGD6	Q6ZV73	1430 aa		32	■■■□□ 2.71
SGPL1-204	ENST00000486993	KIF3B	O15066	747 aa		32	■■■□□ 2.71
SGPL1-204	ENST00000486993	CLTC	Q00610	1675 aa	Known RBP	31.98	■■■□□ 2.71
SGPL1-204	ENST00000486993	MAST1	Q9Y2H9	1570 aa		31.96	■■■□□ 2.71
SGPL1-204	ENST00000486993	PREX1	Q8TCU6	1659 aa		31.95	■■■□□ 2.71
SGPL1-204	ENST00000486993	ZMYM3	Q14202	1370 aa		31.94	■■■□□ 2.7
SGPL1-204	ENST00000486993	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.93	■■■□□ 2.7
SGPL1-204	ENST00000486993	MROH2A	A6NES4	1674 aa		31.92	■■■□□ 2.7
SGPL1-204	ENST00000486993	FAM50A	Q14320	339 aa	Known RBP	31.91	■■■□□ 2.7
SGPL1-204	ENST00000486993	PPP6R1	Q9UPN7	881 aa		31.9	■■■□□ 2.7
SGPL1-204	ENST00000486993	ABCC5	O15440	1437 aa		31.9	■■■□□ 2.7
SGPL1-204	ENST00000486993	UHRF1BP1	Q6BDS2	1440 aa		31.9	■■■□□ 2.7
SGPL1-204	ENST00000486993	TCOF1	Q13428	1488 aa	Known RBP	31.89	■■■□□ 2.7
SGPL1-204	ENST00000486993	CROCC2	H7BZ55	1655 aa		31.87	■■■□□ 2.69
SGPL1-204	ENST00000486993	DAPK1	P53355	1430 aa		31.87	■■■□□ 2.69
SGPL1-204	ENST00000486993	SETD1B	Q9UPS6	1966 aa	Known RBP	31.87	■■■□□ 2.69
SGPL1-204	ENST00000486993	DNMT1	P26358	1616 aa	Known RBP	31.86	■■■□□ 2.69
SGPL1-204	ENST00000486993	RRP7BP	Q9NSQ0	103 aa		31.85	■■■□□ 2.69
SGPL1-204	ENST00000486993	CHIC2	Q9UKJ5	165 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms