RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
NR1H3-223ENST00000486991 KIF14Q15058 1648 aa21.07■□□□□ 0.96
NR1H3-223ENST00000486991 MLECQ14165 292 aa21.07■□□□□ 0.96
NR1H3-223ENST00000486991 ZFYVE16Q7Z3T8 1539 aa21.06■□□□□ 0.96
NR1H3-223ENST00000486991 SCAPERQ9BY12 1400 aa21.05■□□□□ 0.96
NR1H3-223ENST00000486991 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
NR1H3-223ENST00000486991 LMTK3Q96Q04 1460 aa21.05■□□□□ 0.96
NR1H3-223ENST00000486991 PLCH2O75038 1416 aa21.04■□□□□ 0.96
NR1H3-223ENST00000486991 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
NR1H3-223ENST00000486991 HSPA2P54652 639 aa21.03■□□□□ 0.96
NR1H3-223ENST00000486991 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
NR1H3-223ENST00000486991 TROQ12816 1431 aaPredicted RBP21.01■□□□□ 0.95
NR1H3-223ENST00000486991 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
NR1H3-223ENST00000486991 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
NR1H3-223ENST00000486991 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
NR1H3-223ENST00000486991 FBXO41Q8TF61 875 aa20.99■□□□□ 0.95
NR1H3-223ENST00000486991 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
NR1H3-223ENST00000486991 EFCAB2Q5VUJ9 269 aa20.97■□□□□ 0.95
NR1H3-223ENST00000486991 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
NR1H3-223ENST00000486991 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
NR1H3-223ENST00000486991 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
NR1H3-223ENST00000486991 FER1L4A9Z1Z3 1794 aa20.93■□□□□ 0.94
NR1H3-223ENST00000486991 ATP10AO60312 1499 aa20.93■□□□□ 0.94
NR1H3-223ENST00000486991 CEBPAP49715 358 aaPredicted RBP20.91■□□□□ 0.94
NR1H3-223ENST00000486991 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
NR1H3-223ENST00000486991 PREX2Q70Z35 1606 aa20.9■□□□□ 0.94
NR1H3-223ENST00000486991 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
NR1H3-223ENST00000486991 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.94
NR1H3-223ENST00000486991 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
NR1H3-223ENST00000486991 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
NR1H3-223ENST00000486991 ZNF518AQ6AHZ1 1483 aa20.85■□□□□ 0.93
NR1H3-223ENST00000486991 KDM5CP41229 1560 aa20.83■□□□□ 0.92
NR1H3-223ENST00000486991 DIP2CQ9Y2E4 1556 aa20.81■□□□□ 0.92
NR1H3-223ENST00000486991 TRAPPC8Q9Y2L5 1435 aa20.81■□□□□ 0.92
NR1H3-223ENST00000486991 ABCA6Q8N139 1617 aa20.79■□□□□ 0.92
NR1H3-223ENST00000486991 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
NR1H3-223ENST00000486991 ABCC1P33527 1531 aa20.78■□□□□ 0.92
NR1H3-223ENST00000486991 EHBP1L1Q8N3D4 1523 aa20.76■□□□□ 0.91
NR1H3-223ENST00000486991 PREX1Q8TCU6 1659 aa20.76■□□□□ 0.91
NR1H3-223ENST00000486991 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
NR1H3-223ENST00000486991 SAMD9LQ8IVG5 1584 aa20.75■□□□□ 0.91
NR1H3-223ENST00000486991 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
NR1H3-223ENST00000486991 GPATCH8Q9UKJ3 1502 aaKnown RBP20.74■□□□□ 0.91
NR1H3-223ENST00000486991 VPS8Q8N3P4 1428 aa20.74■□□□□ 0.91
NR1H3-223ENST00000486991 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
NR1H3-223ENST00000486991 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
NR1H3-223ENST00000486991 KIDINS220Q9ULH0 1771 aa20.71■□□□□ 0.91
NR1H3-223ENST00000486991 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
NR1H3-223ENST00000486991 STRCQ7RTU9 1775 aa20.7■□□□□ 0.9
NR1H3-223ENST00000486991 C3P01024 1663 aa20.7■□□□□ 0.9
NR1H3-223ENST00000486991 MTUS2Q5JR59 1369 aa20.7■□□□□ 0.9
NR1H3-223ENST00000486991 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.9
NR1H3-223ENST00000486991 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
NR1H3-223ENST00000486991 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
NR1H3-223ENST00000486991 AGLP35573 1532 aa20.66■□□□□ 0.9
NR1H3-223ENST00000486991 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
NR1H3-223ENST00000486991 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
NR1H3-223ENST00000486991 SETD1BQ9UPS6 1966 aaKnown RBP20.62■□□□□ 0.89
NR1H3-223ENST00000486991 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
NR1H3-223ENST00000486991 NCOA2Q15596 1464 aa20.62■□□□□ 0.89
NR1H3-223ENST00000486991 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
NR1H3-223ENST00000486991 SPAG9O60271 1321 aaKnown RBP20.61■□□□□ 0.89
NR1H3-223ENST00000486991 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
NR1H3-223ENST00000486991 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
NR1H3-223ENST00000486991 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
NR1H3-223ENST00000486991 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
NR1H3-223ENST00000486991 CFDP1Q9UEE9 299 aaPredicted RBP20.58■□□□□ 0.89
NR1H3-223ENST00000486991 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
NR1H3-223ENST00000486991 ZNF644Q9H582 1327 aaPredicted RBP20.56■□□□□ 0.88
NR1H3-223ENST00000486991 MBD5Q9P267 1494 aa20.55■□□□□ 0.88
NR1H3-223ENST00000486991 ATP7AQ04656 1500 aa20.54■□□□□ 0.88
NR1H3-223ENST00000486991 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
NR1H3-223ENST00000486991 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
NR1H3-223ENST00000486991 PTPRTO14522 1441 aa20.52■□□□□ 0.87
NR1H3-223ENST00000486991 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
NR1H3-223ENST00000486991 GGT6Q6P531 493 aa20.51■□□□□ 0.87
NR1H3-223ENST00000486991 A2MP01023 1474 aa20.5■□□□□ 0.87
NR1H3-223ENST00000486991 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
NR1H3-223ENST00000486991 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-223ENST00000486991 NCOA1Q15788 1441 aa20.5■□□□□ 0.87
NR1H3-223ENST00000486991 PLXNC1O60486 1568 aa20.5■□□□□ 0.87
NR1H3-223ENST00000486991 MROH2AA6NES4 1674 aa20.49■□□□□ 0.87
NR1H3-223ENST00000486991 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
NR1H3-223ENST00000486991 CAMSAP1Q5T5Y3 1602 aa20.48■□□□□ 0.87
NR1H3-223ENST00000486991 LTBP4Q8N2S1 1624 aa20.46■□□□□ 0.87
NR1H3-223ENST00000486991 NPATQ14207 1427 aa20.46■□□□□ 0.87
NR1H3-223ENST00000486991 ADGBQ8N7X0 1667 aa20.46■□□□□ 0.87
NR1H3-223ENST00000486991 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
NR1H3-223ENST00000486991 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
NR1H3-223ENST00000486991 CCDC141Q6ZP82 1450 aa20.42■□□□□ 0.86
NR1H3-223ENST00000486991 MYOM3Q5VTT5 1437 aa20.41■□□□□ 0.86
NR1H3-223ENST00000486991 MYO3AQ8NEV4 1616 aa20.41■□□□□ 0.86
NR1H3-223ENST00000486991 RTEL1-TNFRSF6BF6WH68 1400 aa20.39■□□□□ 0.85
NR1H3-223ENST00000486991 ZNF335Q9H4Z2 1342 aaPredicted RBP20.39■□□□□ 0.85
NR1H3-223ENST00000486991 ILDR2Q71H61 639 aa20.39■□□□□ 0.85
NR1H3-223ENST00000486991 DISP3Q9P2K9 1392 aa20.38■□□□□ 0.85
NR1H3-223ENST00000486991 CEP170BQ9Y4F5 1589 aaPredicted RBP20.37■□□□□ 0.85
NR1H3-223ENST00000486991 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
NR1H3-223ENST00000486991 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
NR1H3-223ENST00000486991 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms