RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
SF1-216ENST00000486867 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
SF1-216ENST00000486867 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
SF1-216ENST00000486867 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
SF1-216ENST00000486867 GPATCH8Q9UKJ3 1502 aaKnown RBP20.9■□□□□ 0.94
SF1-216ENST00000486867 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.94
SF1-216ENST00000486867 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
SF1-216ENST00000486867 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
SF1-216ENST00000486867 EFCAB2Q5VUJ9 269 aa20.88■□□□□ 0.93
SF1-216ENST00000486867 ABCC1P33527 1531 aa20.87■□□□□ 0.93
SF1-216ENST00000486867 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
SF1-216ENST00000486867 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
SF1-216ENST00000486867 KDM5CP41229 1560 aa20.84■□□□□ 0.93
SF1-216ENST00000486867 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
SF1-216ENST00000486867 SCAPERQ9BY12 1400 aa20.83■□□□□ 0.93
SF1-216ENST00000486867 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
SF1-216ENST00000486867 ARHGEF40Q8TER5 1519 aa20.81■□□□□ 0.92
SF1-216ENST00000486867 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
SF1-216ENST00000486867 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
SF1-216ENST00000486867 ARHGEF12Q9NZN5 1544 aa20.79■□□□□ 0.92
SF1-216ENST00000486867 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
SF1-216ENST00000486867 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
SF1-216ENST00000486867 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
SF1-216ENST00000486867 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
SF1-216ENST00000486867 ZFYVE16Q7Z3T8 1539 aa20.74■□□□□ 0.91
SF1-216ENST00000486867 SYCP2Q9BX26 1530 aa20.74■□□□□ 0.91
SF1-216ENST00000486867 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
SF1-216ENST00000486867 CFDP1Q9UEE9 299 aaPredicted RBP20.72■□□□□ 0.91
SF1-216ENST00000486867 MLH3Q9UHC1 1453 aa20.72■□□□□ 0.91
SF1-216ENST00000486867 KIDINS220Q9ULH0 1771 aa20.72■□□□□ 0.91
SF1-216ENST00000486867 TRAPPC8Q9Y2L5 1435 aa20.71■□□□□ 0.91
SF1-216ENST00000486867 SIGLEC1Q9BZZ2 1709 aa20.7■□□□□ 0.9
SF1-216ENST00000486867 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
SF1-216ENST00000486867 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
SF1-216ENST00000486867 YEATS2Q9ULM3 1422 aa20.69■□□□□ 0.9
SF1-216ENST00000486867 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
SF1-216ENST00000486867 APLP2Q06481 763 aa20.68■□□□□ 0.9
SF1-216ENST00000486867 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
SF1-216ENST00000486867 INO80Q9ULG1 1556 aaPredicted RBP20.68■□□□□ 0.9
SF1-216ENST00000486867 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
SF1-216ENST00000486867 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
SF1-216ENST00000486867 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
SF1-216ENST00000486867 AFAP1Q8N556 730 aa20.66■□□□□ 0.9
SF1-216ENST00000486867 ARHGEF5Q12774 1597 aa20.66■□□□□ 0.9
SF1-216ENST00000486867 BCORL1Q5H9F3 1711 aa20.66■□□□□ 0.9
SF1-216ENST00000486867 ADAMTSL3P82987 1691 aa20.64■□□□□ 0.9
SF1-216ENST00000486867 ATP10AO60312 1499 aa20.64■□□□□ 0.89
SF1-216ENST00000486867 KDM4FA0A1W2PPD8 638 aa20.63■□□□□ 0.89
SF1-216ENST00000486867 ZNF644Q9H582 1327 aaPredicted RBP20.62■□□□□ 0.89
SF1-216ENST00000486867 ZNF777Q9ULD5 760 aaPredicted RBP20.62■□□□□ 0.89
SF1-216ENST00000486867 ATP7AQ04656 1500 aa20.61■□□□□ 0.89
SF1-216ENST00000486867 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
SF1-216ENST00000486867 HNRNPMP52272 730 aaKnown RBP eCLIP20.6■□□□□ 0.89
SF1-216ENST00000486867 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
SF1-216ENST00000486867 PTPN23Q9H3S7 1636 aa20.59■□□□□ 0.89
SF1-216ENST00000486867 ADGBQ8N7X0 1667 aa20.58■□□□□ 0.89
SF1-216ENST00000486867 AGLP35573 1532 aa20.58■□□□□ 0.88
SF1-216ENST00000486867 TCOF1Q13428 1488 aaKnown RBP20.57■□□□□ 0.88
SF1-216ENST00000486867 RTEL1-TNFRSF6BF6WH68 1400 aa20.57■□□□□ 0.88
SF1-216ENST00000486867 MAST1Q9Y2H9 1570 aa20.57■□□□□ 0.88
SF1-216ENST00000486867 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
SF1-216ENST00000486867 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
SF1-216ENST00000486867 CROCC2H7BZ55 1655 aa20.56■□□□□ 0.88
SF1-216ENST00000486867 PLXNC1O60486 1568 aa20.55■□□□□ 0.88
SF1-216ENST00000486867 SPAG9O60271 1321 aaKnown RBP20.53■□□□□ 0.88
SF1-216ENST00000486867 DNMT1P26358 1616 aaKnown RBP20.52■□□□□ 0.88
SF1-216ENST00000486867 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
SF1-216ENST00000486867 FER1L4A9Z1Z3 1794 aa20.5■□□□□ 0.87
SF1-216ENST00000486867 SHANK2Q9UPX8 1470 aa20.48■□□□□ 0.87
SF1-216ENST00000486867 A2MP01023 1474 aa20.46■□□□□ 0.87
SF1-216ENST00000486867 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
SF1-216ENST00000486867 ABCC5O15440 1437 aa20.44■□□□□ 0.86
SF1-216ENST00000486867 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
SF1-216ENST00000486867 DAPK1P53355 1430 aa20.42■□□□□ 0.86
SF1-216ENST00000486867 PTPRMP28827 1452 aa20.42■□□□□ 0.86
SF1-216ENST00000486867 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
SF1-216ENST00000486867 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
SF1-216ENST00000486867 DHX29Q7Z478 1369 aaKnown RBP20.4■□□□□ 0.86
SF1-216ENST00000486867 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
SF1-216ENST00000486867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
SF1-216ENST00000486867 TSPY4P0CV99 314 aa20.39■□□□□ 0.85
SF1-216ENST00000486867 TSPY10P0CW01 314 aa20.39■□□□□ 0.85
SF1-216ENST00000486867 MROH2AA6NES4 1674 aa20.38■□□□□ 0.85
SF1-216ENST00000486867 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
SF1-216ENST00000486867 RNF17Q9BXT8 1623 aaKnown RBP20.36■□□□□ 0.85
SF1-216ENST00000486867 DUOX2Q9NRD8 1548 aa20.35■□□□□ 0.85
SF1-216ENST00000486867 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
SF1-216ENST00000486867 RRBP1Q9P2E9 1410 aaKnown RBP20.34■□□□□ 0.85
SF1-216ENST00000486867 C3P01024 1663 aa20.33■□□□□ 0.85
SF1-216ENST00000486867 SETD1BQ9UPS6 1966 aaKnown RBP20.33■□□□□ 0.84
SF1-216ENST00000486867 CNTLNQ9NXG0 1405 aa20.32■□□□□ 0.84
SF1-216ENST00000486867 CLTCQ00610 1675 aaKnown RBP20.3■□□□□ 0.84
SF1-216ENST00000486867 MLECQ14165 292 aa20.3■□□□□ 0.84
SF1-216ENST00000486867 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
SF1-216ENST00000486867 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
SF1-216ENST00000486867 MROH1Q8NDA8 1641 aa20.29■□□□□ 0.84
SF1-216ENST00000486867 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
SF1-216ENST00000486867 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
SF1-216ENST00000486867 ERBINQ96RT1 1412 aa20.27■□□□□ 0.84
SF1-216ENST00000486867 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms