RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 FANCAO15360 1455 aa29.72■■■□□ 2.35
ATG9A-221ENST00000486766 NEO1Q92859 1461 aa29.69■■■□□ 2.34
ATG9A-221ENST00000486766 GPATCH8Q9UKJ3 1502 aaKnown RBP29.69■■■□□ 2.34
ATG9A-221ENST00000486766 KDM6BO15054 1643 aa29.68■■■□□ 2.34
ATG9A-221ENST00000486766 EFCAB2Q5VUJ9 269 aa29.63■■■□□ 2.33
ATG9A-221ENST00000486766 PHLDB1Q86UU1 1377 aa29.62■■■□□ 2.33
ATG9A-221ENST00000486766 AKNAQ7Z591 1439 aa29.62■■■□□ 2.33
ATG9A-221ENST00000486766 PPARGC1BQ86YN6 1023 aaKnown RBP29.59■■■□□ 2.33
ATG9A-221ENST00000486766 CFDP1Q9UEE9 299 aaPredicted RBP29.59■■■□□ 2.33
ATG9A-221ENST00000486766 ADGRL1O94910 1474 aa29.58■■■□□ 2.33
ATG9A-221ENST00000486766 SAMD9LQ8IVG5 1584 aa29.57■■■□□ 2.32
ATG9A-221ENST00000486766 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
ATG9A-221ENST00000486766 MYOM3Q5VTT5 1437 aa29.55■■■□□ 2.32
ATG9A-221ENST00000486766 ABCC1P33527 1531 aa29.53■■■□□ 2.32
ATG9A-221ENST00000486766 COL17A1Q9UMD9 1497 aaPredicted RBP29.53■■■□□ 2.32
ATG9A-221ENST00000486766 RICTORQ6R327 1708 aa29.51■■■□□ 2.31
ATG9A-221ENST00000486766 SCAPERQ9BY12 1400 aa29.5■■■□□ 2.31
ATG9A-221ENST00000486766 DENND4BO75064 1496 aaPredicted RBP29.48■■■□□ 2.31
ATG9A-221ENST00000486766 SYCP2Q9BX26 1530 aa29.47■■■□□ 2.31
ATG9A-221ENST00000486766 CAMSAP2Q08AD1 1489 aa29.47■■■□□ 2.31
ATG9A-221ENST00000486766 PLEKHH2Q8IVE3 1493 aa29.47■■■□□ 2.31
ATG9A-221ENST00000486766 FRMPD1Q5SYB0 1578 aa29.47■■■□□ 2.31
ATG9A-221ENST00000486766 MIA2Q96PC5 1412 aa29.46■■■□□ 2.31
ATG9A-221ENST00000486766 PTPN23Q9H3S7 1636 aa29.45■■■□□ 2.3
ATG9A-221ENST00000486766 POGZQ7Z3K3 1410 aa29.44■■■□□ 2.3
ATG9A-221ENST00000486766 FGD6Q6ZV73 1430 aa29.43■■■□□ 2.3
ATG9A-221ENST00000486766 ZNF644Q9H582 1327 aaPredicted RBP29.43■■■□□ 2.3
ATG9A-221ENST00000486766 ARHGEF12Q9NZN5 1544 aa29.42■■■□□ 2.3
ATG9A-221ENST00000486766 RAPGEF3O95398 923 aa29.42■■■□□ 2.3
ATG9A-221ENST00000486766 KIAA1107Q9UPP5 1409 aa29.4■■■□□ 2.3
ATG9A-221ENST00000486766 ZNF518AQ6AHZ1 1483 aa29.4■■■□□ 2.3
ATG9A-221ENST00000486766 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.29
ATG9A-221ENST00000486766 TRAPPC8Q9Y2L5 1435 aa29.36■■■□□ 2.29
ATG9A-221ENST00000486766 ZMYM4Q5VZL5 1548 aa29.35■■■□□ 2.29
ATG9A-221ENST00000486766 KDM5CP41229 1560 aa29.35■■■□□ 2.29
ATG9A-221ENST00000486766 TCOF1Q13428 1488 aaKnown RBP29.33■■■□□ 2.29
ATG9A-221ENST00000486766 ARHGEF5Q12774 1597 aa29.33■■■□□ 2.29
ATG9A-221ENST00000486766 HECW2Q9P2P5 1572 aa29.32■■■□□ 2.28
ATG9A-221ENST00000486766 MBD5Q9P267 1494 aa29.31■■■□□ 2.28
ATG9A-221ENST00000486766 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
ATG9A-221ENST00000486766 CCDC141Q6ZP82 1450 aa29.29■■■□□ 2.28
ATG9A-221ENST00000486766 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
ATG9A-221ENST00000486766 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.27
ATG9A-221ENST00000486766 FAM50AQ14320 339 aaKnown RBP29.26■■■□□ 2.27
ATG9A-221ENST00000486766 MYT1LQ9UL68 1186 aa29.26■■■□□ 2.27
ATG9A-221ENST00000486766 ARHGEF40Q8TER5 1519 aa29.25■■■□□ 2.27
ATG9A-221ENST00000486766 MAGI2Q86UL8 1455 aa29.25■■■□□ 2.27
ATG9A-221ENST00000486766 DNMT1P26358 1616 aaKnown RBP29.25■■■□□ 2.27
ATG9A-221ENST00000486766 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
ATG9A-221ENST00000486766 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
ATG9A-221ENST00000486766 RSPH4AQ5TD94 716 aa29.23■■■□□ 2.27
ATG9A-221ENST00000486766 MLH3Q9UHC1 1453 aa29.22■■■□□ 2.27
ATG9A-221ENST00000486766 SPAG9O60271 1321 aaKnown RBP29.21■■■□□ 2.27
ATG9A-221ENST00000486766 ATP7AQ04656 1500 aa29.21■■■□□ 2.27
ATG9A-221ENST00000486766 RRBP1Q9P2E9 1410 aaKnown RBP29.2■■■□□ 2.26
ATG9A-221ENST00000486766 YEATS2Q9ULM3 1422 aa29.2■■■□□ 2.26
ATG9A-221ENST00000486766 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
ATG9A-221ENST00000486766 DAPK1P53355 1430 aa29.18■■■□□ 2.26
ATG9A-221ENST00000486766 DIP2CQ9Y2E4 1556 aa29.16■■■□□ 2.26
ATG9A-221ENST00000486766 MAST1Q9Y2H9 1570 aa29.16■■■□□ 2.26
ATG9A-221ENST00000486766 TSPY4P0CV99 314 aa29.15■■■□□ 2.26
ATG9A-221ENST00000486766 TSPY10P0CW01 314 aa29.15■■■□□ 2.26
ATG9A-221ENST00000486766 ABCC5O15440 1437 aa29.14■■■□□ 2.26
ATG9A-221ENST00000486766 SHANK2Q9UPX8 1470 aa29.13■■■□□ 2.25
ATG9A-221ENST00000486766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.25
ATG9A-221ENST00000486766 RTEL1-TNFRSF6BF6WH68 1400 aa29.12■■■□□ 2.25
ATG9A-221ENST00000486766 C9orf84Q5VXU9 1444 aa29.12■■■□□ 2.25
ATG9A-221ENST00000486766 ADGBQ8N7X0 1667 aa29.12■■■□□ 2.25
ATG9A-221ENST00000486766 ATP10AO60312 1499 aa29.1■■■□□ 2.25
ATG9A-221ENST00000486766 PLXNC1O60486 1568 aa29.06■■■□□ 2.24
ATG9A-221ENST00000486766 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
ATG9A-221ENST00000486766 SIGLEC1Q9BZZ2 1709 aa29.05■■■□□ 2.24
ATG9A-221ENST00000486766 REREQ9P2R6 1566 aa29.05■■■□□ 2.24
ATG9A-221ENST00000486766 ITGAEP38570 1179 aa29.03■■■□□ 2.24
ATG9A-221ENST00000486766 CHIC2Q9UKJ5 165 aa29.02■■■□□ 2.24
ATG9A-221ENST00000486766 A2MP01023 1474 aa28.99■■■□□ 2.23
ATG9A-221ENST00000486766 ARID4BQ4LE39 1312 aaPredicted RBP28.98■■■□□ 2.23
ATG9A-221ENST00000486766 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
ATG9A-221ENST00000486766 ANKRD30AQ9BXX3 1397 aa28.97■■■□□ 2.23
ATG9A-221ENST00000486766 ADGRL2O95490 1459 aa28.97■■■□□ 2.23
ATG9A-221ENST00000486766 KIF15Q9NS87 1388 aa28.93■■■□□ 2.22
ATG9A-221ENST00000486766 DUOX2Q9NRD8 1548 aa28.93■■■□□ 2.22
ATG9A-221ENST00000486766 BCORL1Q5H9F3 1711 aa28.92■■■□□ 2.22
ATG9A-221ENST00000486766 AGLP35573 1532 aa28.92■■■□□ 2.22
ATG9A-221ENST00000486766 NCOA1Q15788 1441 aa28.92■■■□□ 2.22
ATG9A-221ENST00000486766 DHX29Q7Z478 1369 aaKnown RBP28.91■■■□□ 2.22
ATG9A-221ENST00000486766 RRP7BPQ9NSQ0 103 aa28.91■■■□□ 2.22
ATG9A-221ENST00000486766 EIF2AK4Q9P2K8 1649 aaKnown RBP28.88■■■□□ 2.21
ATG9A-221ENST00000486766 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
ATG9A-221ENST00000486766 MLECQ14165 292 aa28.84■■■□□ 2.21
ATG9A-221ENST00000486766 ERBINQ96RT1 1412 aa28.84■■■□□ 2.21
ATG9A-221ENST00000486766 FER1L4A9Z1Z3 1794 aa28.83■■■□□ 2.21
ATG9A-221ENST00000486766 GCC2Q8IWJ2 1684 aa28.82■■■□□ 2.2
ATG9A-221ENST00000486766 ADAMTSL3P82987 1691 aa28.81■■■□□ 2.2
ATG9A-221ENST00000486766 KIF3BO15066 747 aa28.79■■■□□ 2.2
ATG9A-221ENST00000486766 MADDQ8WXG6 1647 aa28.79■■■□□ 2.2
ATG9A-221ENST00000486766 RNF17Q9BXT8 1623 aaKnown RBP28.78■■■□□ 2.2
ATG9A-221ENST00000486766 ANKRD50Q9ULJ7 1429 aa28.77■■■□□ 2.2
ATG9A-221ENST00000486766 RIMS1Q86UR5 1692 aaKnown RBP28.75■■■□□ 2.19
ATG9A-221ENST00000486766 GGT6Q6P531 493 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms