RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
GSDMB-210ENST00000486560 TIAM1Q13009 1591 aa18.93■□□□□ 0.62
GSDMB-210ENST00000486560 DENND4BO75064 1496 aaPredicted RBP18.92■□□□□ 0.62
GSDMB-210ENST00000486560 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
GSDMB-210ENST00000486560 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
GSDMB-210ENST00000486560 ZNF777Q9ULD5 760 aaPredicted RBP18.92■□□□□ 0.62
GSDMB-210ENST00000486560 FRMPD1Q5SYB0 1578 aa18.92■□□□□ 0.62
GSDMB-210ENST00000486560 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
GSDMB-210ENST00000486560 APLP2Q06481 763 aa18.9■□□□□ 0.62
GSDMB-210ENST00000486560 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
GSDMB-210ENST00000486560 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
GSDMB-210ENST00000486560 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
GSDMB-210ENST00000486560 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
GSDMB-210ENST00000486560 CFDP1Q9UEE9 299 aaPredicted RBP18.82■□□□□ 0.6
GSDMB-210ENST00000486560 ZFYVE16Q7Z3T8 1539 aa18.82■□□□□ 0.6
GSDMB-210ENST00000486560 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
GSDMB-210ENST00000486560 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
GSDMB-210ENST00000486560 ABCC1P33527 1531 aa18.81■□□□□ 0.6
GSDMB-210ENST00000486560 ARHGEF40Q8TER5 1519 aa18.81■□□□□ 0.6
GSDMB-210ENST00000486560 GPATCH8Q9UKJ3 1502 aaKnown RBP18.8■□□□□ 0.6
GSDMB-210ENST00000486560 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
GSDMB-210ENST00000486560 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
GSDMB-210ENST00000486560 LRRC9Q6ZRR7 1453 aa18.79■□□□□ 0.6
GSDMB-210ENST00000486560 ZNF518AQ6AHZ1 1483 aa18.78■□□□□ 0.6
GSDMB-210ENST00000486560 ZMYM4Q5VZL5 1548 aa18.78■□□□□ 0.6
GSDMB-210ENST00000486560 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.6
GSDMB-210ENST00000486560 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
GSDMB-210ENST00000486560 YEATS2Q9ULM3 1422 aa18.75■□□□□ 0.59
GSDMB-210ENST00000486560 KDM4FA0A1W2PPD8 638 aa18.75■□□□□ 0.59
GSDMB-210ENST00000486560 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
GSDMB-210ENST00000486560 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.59
GSDMB-210ENST00000486560 MAP3K1Q13233 1512 aa18.73■□□□□ 0.59
GSDMB-210ENST00000486560 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
GSDMB-210ENST00000486560 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
GSDMB-210ENST00000486560 KDM5CP41229 1560 aa18.72■□□□□ 0.59
GSDMB-210ENST00000486560 MLECQ14165 292 aa18.71■□□□□ 0.59
GSDMB-210ENST00000486560 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
GSDMB-210ENST00000486560 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
GSDMB-210ENST00000486560 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
GSDMB-210ENST00000486560 ABCA6Q8N139 1617 aa18.7■□□□□ 0.58
GSDMB-210ENST00000486560 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
GSDMB-210ENST00000486560 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
GSDMB-210ENST00000486560 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
GSDMB-210ENST00000486560 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
GSDMB-210ENST00000486560 KIDINS220Q9ULH0 1771 aa18.68■□□□□ 0.58
GSDMB-210ENST00000486560 DIP2CQ9Y2E4 1556 aa18.68■□□□□ 0.58
GSDMB-210ENST00000486560 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
GSDMB-210ENST00000486560 ATP10AO60312 1499 aa18.66■□□□□ 0.58
GSDMB-210ENST00000486560 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
GSDMB-210ENST00000486560 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
GSDMB-210ENST00000486560 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
GSDMB-210ENST00000486560 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
GSDMB-210ENST00000486560 ATP7AQ04656 1500 aa18.64■□□□□ 0.57
GSDMB-210ENST00000486560 PPARGC1BQ86YN6 1023 aaKnown RBP18.63■□□□□ 0.57
GSDMB-210ENST00000486560 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
GSDMB-210ENST00000486560 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
GSDMB-210ENST00000486560 MLH3Q9UHC1 1453 aa18.62■□□□□ 0.57
GSDMB-210ENST00000486560 INO80Q9ULG1 1556 aaPredicted RBP18.61■□□□□ 0.57
GSDMB-210ENST00000486560 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
GSDMB-210ENST00000486560 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
GSDMB-210ENST00000486560 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
GSDMB-210ENST00000486560 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
GSDMB-210ENST00000486560 MBD5Q9P267 1494 aa18.55■□□□□ 0.56
GSDMB-210ENST00000486560 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
GSDMB-210ENST00000486560 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
GSDMB-210ENST00000486560 PTPRMP28827 1452 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 TSPY4P0CV99 314 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 TSPY10P0CW01 314 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 MIA2Q96PC5 1412 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 REREQ9P2R6 1566 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 CROCC2H7BZ55 1655 aa18.53■□□□□ 0.56
GSDMB-210ENST00000486560 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
GSDMB-210ENST00000486560 A2MP01023 1474 aa18.51■□□□□ 0.55
GSDMB-210ENST00000486560 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
GSDMB-210ENST00000486560 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
GSDMB-210ENST00000486560 AGLP35573 1532 aa18.47■□□□□ 0.55
GSDMB-210ENST00000486560 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
GSDMB-210ENST00000486560 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
GSDMB-210ENST00000486560 GGT6Q6P531 493 aa18.46■□□□□ 0.55
GSDMB-210ENST00000486560 RTEL1-TNFRSF6BF6WH68 1400 aa18.46■□□□□ 0.55
GSDMB-210ENST00000486560 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
GSDMB-210ENST00000486560 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
GSDMB-210ENST00000486560 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
GSDMB-210ENST00000486560 C3P01024 1663 aa18.43■□□□□ 0.54
GSDMB-210ENST00000486560 DAPK1P53355 1430 aa18.42■□□□□ 0.54
GSDMB-210ENST00000486560 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
GSDMB-210ENST00000486560 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
GSDMB-210ENST00000486560 KIF3BO15066 747 aa18.41■□□□□ 0.54
GSDMB-210ENST00000486560 ITGAEP38570 1179 aa18.39■□□□□ 0.53
GSDMB-210ENST00000486560 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
GSDMB-210ENST00000486560 ABCC5O15440 1437 aa18.39■□□□□ 0.53
GSDMB-210ENST00000486560 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
GSDMB-210ENST00000486560 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
GSDMB-210ENST00000486560 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
GSDMB-210ENST00000486560 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
GSDMB-210ENST00000486560 CNTLNQ9NXG0 1405 aa18.34■□□□□ 0.53
GSDMB-210ENST00000486560 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
GSDMB-210ENST00000486560 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
GSDMB-210ENST00000486560 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
GSDMB-210ENST00000486560 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms